Silkworm Genome Informatics Database

Gene

KWMTBOMO08215

Pre Gene Modal

BGIBMGA009499

Annotation

neuropeptide_receptor_A27_[Bombyx_mori]

Location

Bomo_Chr14(+):2023177-2023596 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.929

CDS

ATGGTTGAATTCACACGAGAAAATGAAACTGTGTCTGAACTAATATCGCGCTGCACGAATATCTCACACTTCGACTGCACCGAAGACGCGATGCTGTGGGTGATGATGGGACCACGAAGGCTTCCCCTGCAGAAAATCGTGCCCATATCGGTACTGCTCTTGGTCATATTCGTAACGGGAGTGGTGGGAAATCTGACCGTCTGCGTGGTCATAGTACGACACCCCACGATGCATACCGCCACCAATTATTATCTTTTCAGTCTGGCGCTCAGTGACTTGTTGCTTCTATTATTTGGTAAGTTAATCTTAAGTAATTGA

Protein

MVEFTRENETVSELISRCTNISHFDCTEDAMLWVMMGPRRLPLQKIVPISVLLLVIFVTGVVGNLTVCVVIVRHPTMHTATNYYLFSLALSDLLLLLFGKLILSN

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

H9JIZ8 B3XXP0 A0A0S1YDP4 A0A2H1VB21 A0A2A4JQ25 A0A2W1BHI9 + More
A0A0L7K4C7 A0A2H1VS57 A0A0N1ICV8 A0A194PYT9 B3XXN8 A0A194PY92 A0A0A1XP03 A0A1B0BPV3 A0A1A9Y1K2 A0A154NXN6 A0A1Y1NI26 F4W9A9 A0A1B0AI23 J9JZC2 A0A182MZU4

Pubmed

19121390 18725956 28756777 26227816 26354079 25830018 + More
28004739 21719571

EMBL

BABH01023081 AB330448 BAG68426.1 KT031025 ALM88323.1 ODYU01001593 + More
SOQ38027.1 NWSH01000919 PCG73543.1 KZ150088 PZC73731.1 JTDY01010715 KOB58073.1 ODYU01004114 SOQ43647.1 KQ460889 KPJ11066.1 KQ459585 KPI98198.1 AB330446 BAG68424.1 KPI98302.1 GBXI01001566 JAD12726.1 JXJN01018240 KQ434778 KZC04373.1 GEZM01007119 JAV95367.1 GL888002 EGI69291.1 ABLF02026322

Proteomes

UP000005204 UP000218220 UP000037510 UP000053240 UP000053268 UP000092460 + More
UP000092443 UP000076502 UP000007755 UP000092445 UP000007819 UP000075884

PRIDE

H9JIZ8 B3XXP0 B3XXN8

Pfam

PF00001 7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM
IPR005390   NeuromedU_rcpt

ProteinModelPortal

H9JIZ8 B3XXP0 A0A0S1YDP4 A0A2H1VB21 A0A2A4JQ25 A0A2W1BHI9 + More
A0A0L7K4C7 A0A2H1VS57 A0A0N1ICV8 A0A194PYT9 B3XXN8 A0A194PY92 A0A0A1XP03 A0A1B0BPV3 A0A1A9Y1K2 A0A154NXN6 A0A1Y1NI26 F4W9A9 A0A1B0AI23 J9JZC2 A0A182MZU4

PDB

5DHH E-value=0.00190946, Score=91

KEGG

100174938 K05052 neuromedin U receptor 1 | (RefSeq) NGR-A27, BNGR-A27; neuropeptide receptor A27

GO

GO:0016021 GO:0004930 GO:0001607 GO:0007218 GO:0007186 GO:0016491 GO:0016705 GO:0005634 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Length:

105

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

44.27026

Exp number, first 60 AAs:

12.51238

Total prob of N-in:

0.46063

POSSIBLE N-term signal

sequence

inside

1 - 48

TMhelix

49 - 71

outside

72 - 80

TMhelix

81 - 103

inside

104 - 105

Pi

250.210537

Theta

170.565361

Tajima's D

1.468799

CLR

0.03357

CSRT

0.779111044447778

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree