Silkworm Genome Informatics Database

Gene

KWMTBOMO08212

Annotation

PREDICTED:_cytochrome_b5-like_[Amyelois_transitella]

Location

Bomo_Chr14(+):1919817-1928842 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.979

CDS

ATGGGCGATGTCCAAAGGTACACGTTGGCGGACGTAGCGTCGCGTAACGGGAAAAACGCACCCGTGTGGATTATCTACAAGGATTCAGTCTACGACGTCACAACGTACGTGGATGAGCATCCCGATGGACCGGACTCGATCATGGAGCAGGCCGGCAAAGATGCCACGAAGGACTTTGACCAAACAGGTCACACTGCCGACGCCAAGACCATCATGACCAAGTACAAGATTGGAGAAATTATAGAGGAAGAAAAGAAATACGACGCTAATGGCAAAAAGAAGAAGAAAGTGGTCTCTGCTCCCCCAGAGAAGAACAACAGGAGTTGCATAAACATCGTCACGTGCGGATTGATTGGCTAA

Protein

MGDVQRYTLADVASRNGKNAPVWIIYKDSVYDVTTYVDEHPDGPDSIMEQAGKDATKDFDQTGHTADAKTIMTKYKIGEIIEEEKKYDANGKKKKKVVSAPPEKNNRSCINIVTCGLIG

Similarity

Belongs to the cytochrome b5 family.

Uniprot

H9JIZ6 A0A437AUN7 A0A2H1WR95 A0A212FP33 A0A2W1BK69 A0A2A4IU75 + More
A0A0L7LI02 J3JXY5 U4UUH5 A0A194PYB1 A0A1W4WLV7 V5IAH5 A0A2A3E5Z5

Pubmed

19121390 22118469 28756777 26227816 22516182 23537049 + More
26354079

EMBL

BABH01023070 BABH01023071 RSAL01000411 RVE41860.1 ODYU01010442 SOQ55558.1 + More
AGBW02003881 OWR55502.1 KZ150093 PZC73667.1 NWSH01007486 PCG62948.1 JTDY01001000 KOB75153.1 BT128107 AEE63068.1 KB632374 ERL93815.1 KQ459585 KPI98322.1 GALX01001175 JAB67291.1 KZ288375 PBC26702.1

Proteomes

UP000005204 UP000283053 UP000007151 UP000218220 UP000037510 UP000030742 + More
UP000053268 UP000192223 UP000242457

PRIDE

H9JIZ6

Pfam

PF00173 Cyt-b5

Interpro

IPR001199   Cyt_B5-like_heme/steroid-bd        + More
IPR036400   Cyt_B5-like_heme/steroid_sf
IPR018506   Cyt_B5_heme-BS

SUPFAM

SSF55856 SSF55856

Gene 3D

3.10.120.10

ProteinModelPortal

H9JIZ6 A0A437AUN7 A0A2H1WR95 A0A212FP33 A0A2W1BK69 A0A2A4IU75 + More
A0A0L7LI02 J3JXY5 U4UUH5 A0A194PYB1 A0A1W4WLV7 V5IAH5 A0A2A3E5Z5

PDB

2IBJ E-value=2.78508e-13, Score=175

KEGG

101746830 K23490 cytochrome b5 | (RefSeq) cytochrome b5

GO

GO:0046872 GO:0020037

Length:

119

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00036

Exp number, first 60 AAs:

0.00036

Total prob of N-in:

0.30245

outside

1 - 119

Pi

282.947719

Theta

156.47198

Tajima's D

2.83308

CLR

0.408777

CSRT

0.968101594920254

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics