Gene

KWMTBOMO08203

Pre Gene Modal

BGIBMGA009466

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]

Location

Bomo_Chr14(-):1700925-1710939      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.317

CDS

ATGGAAAACGTGAACTTCCAACCGAGTGGCGAAGATATAGAACGGGCCCTGATGGACCTGGGGCCGCTTCTTGGTGTGACCATCAAGGAAGAGGTGCCCGATGATCTGGCCGAGCCAAGTGCACAGCCACCCTCCCAACTTGCTGTTGGGAGTTTGCCTGATGCACCAGTCGCAGGTGGATCTTCAGTGGCAGAAGGGGAAGCAGTGGAAAGCAATGATAAAGGTTCTGCAGATTCCCTGGCATCGCCCACCACGGGCCGAGCGCCTCTATCTAGTTTGAGATGTGTGCTGTGCTACAATTCATTAGCAAGCTTAACTGGAACACCCAAGCTCATGGAATGTCTGCATTCAATTTGCGAGACCTGCCTCAAAATCAAGATAGAGATGATAAAAAGTGCCAACAGCACAGAATTTCTTGGTGCAGAAAGGGTCACAATATTGTGTCCGATATGCAGGTTTGAATGTCAACAAGCAAACATGATAGACCAGCGTTTCTTTATTGAGAAAATGGCTTTGGAGCAAGTTGGAAATAATGGCGCAATAAGCGGTGACCAGCAGTGCAACAGCTGCGAGGACACGGAGCCGGCCACCAGCTACTGCGTGGACTGCGCGGAGTTCATATGCGACAACTGTGTGCTCGCACACCAAAGACTGAAAATAACAAAAGACCACACGATAAAATCTAAGGAGGAGGCGGTGGCGGAGCTGCAGGCCGCGCAGGGCTCCGCGCGCAACGCGCACGACATGTACTGCACCGAGCACGTGCAGGAGCGGCTCTCTCTGTTCTGTGAGACGTGTGACCGGTTGACTTGCCGAGACTGTCAGCTGCAGCACCACCGCGACCACAAGTATCAGTTCAGCACCGAAATGGCCGCACAGGCCAGGTCGAGCATCTCCTCGCTGCTGTCGGAGGTGAGCTACAAGCGCGTGCTGCTGGGGTCCGCTATGAAGGTCATCCGTGACCGGCACGCGCTCATCGCGGACAAGAAGCGGGCGCTCGTCCACGACATCACGCAGACCGTAGTCAAGTTAACTAACGCGATAAACACCCGCGGTAAGCAGCTGGTGCTGCGGCTCAACGAGGTGTGCGACGCCAAGCAGCGGACCCTCACCGAGAAGAAGGAGGCGCTGGAGCAGCTCGCTGCCATCACCGACCACTGCGTCAAGTTCGTCACGGCGGCGCTCGAGCAGGGCAGCGACACGGCGCTGCTGTACTCCAAGCACTCGGTGTGCGCGCACCTGCAGCGCATCAAGAGTCGCCGGGCGGACATACCCAACCCGGAGATACCCGTCCGGATCAACCTGGCCCTCGACAAATTACCTGAACTGATTCGAGTATTGTCGACAATCGGCGCCATAGTGGTGGACGGCAAGGTGGACGGGGGCTGCGGCGGCTCCCCCGCGGCGACGTCCCCGTACCCCGCGCCCGCCCCCGCCGCCGCCCCCGCGCCCGTCCCCGCTCCCGCCCCCAACAACTCCGCTGTCGTGGCCCTACAGCAAGTCGCTATGCACCAGGTATATTATTTATTTTAA

Protein

MENVNFQPSGEDIERALMDLGPLLGVTIKEEVPDDLAEPSAQPPSQLAVGSLPDAPVAGGSSVAEGEAVESNDKGSADSLASPTTGRAPLSSLRCVLCYNSLASLTGTPKLMECLHSICETCLKIKIEMIKSANSTEFLGAERVTILCPICRFECQQANMIDQRFFIEKMALEQVGNNGAISGDQQCNSCEDTEPATSYCVDCAEFICDNCVLAHQRLKITKDHTIKSKEEAVAELQAAQGSARNAHDMYCTEHVQERLSLFCETCDRLTCRDCQLQHHRDHKYQFSTEMAAQARSSISSLLSEVSYKRVLLGSAMKVIRDRHALIADKKRALVHDITQTVVKLTNAINTRGKQLVLRLNEVCDAKQRTLTEKKEALEQLAAITDHCVKFVTAALEQGSDTALLYSKHSVCAHLQRIKSRRADIPNPEIPVRINLALDKLPELIRVLSTIGAIVVDGKVDGGCGGSPAATSPYPAPAPAAAPAPVPAPAPNNSAVVALQQVAMHQVYYLF

Uniprot

H9JIW5   A0A2H1VU95   A0A2W1BHB7   A0A0N1IEN8   A0A2A4JP59   A0A1B6IY34   + More
A0A1B6DEW6   E0W297   N6T463   D2A1V1   U4UF87   A0A1B6EGQ1   A0A087ZRN1   A0A0M9A6B6   A0A151IHM5   A0A0C9QFX6   A0A0C9RAF0   E2AEJ8   A0A154PE21   F4WNN2   A0A1Y1MAH6   E2BK17   A0A195FW41   A0A195B8J9   A0A158NV25   A0A232FBL6   A0A151XBT7   A0A0J7K8I6   K7J4U0   A0A195ECC9   U5ETF3   A0A1W4X2Z3   A0A336LHI4   A0A026VT47   A0A1B0CFH2   A0A182VVR7   A0A182MGV7   A0A182J258   A0A2M4CQ35   A0A1Q3F0X8   Q171T5   A0A182L8U7   A0A1Q3F0K5   A0A1Q3F0T7   A0A0P6IXD7   A0A182R135   A0A182FSQ9   A0A182HKK9   A0A182U0S1   B0WM08   A0A310SM92   Q7PXC0   A0A182X9M5   A0A182VL25   A0A034VL02   A0A182P9L7   A0A182GJ32   A0A0M4F5L2   B4K8F5   B4NFV5   B4GN11   B4QS12   A0A0B4KHG7   A0A0B4KHT0   A8WHL4   A0A3B0JJN1   Q9U3Y7   Q9VDK5   A0A3B0JK23   A0A0B4KH12   B4IIA2   A0A3B0K920   A0A3B0KA76   A0A3B0KG02   A0A3B0JJN0   B3NYW5   B4LWM7   A0A0B4KGE5   B4PPQ3   A0A1W4VA75   A0A1W4V9S7   A0A1W4VB52   A0A1W4V9S2   A0A1W4UXW0   Q29BS0   W8AS25   W8BEM5   A0A0K8VGH5   A0A0K8VZM9   A0A0A1X6K7   B4JUB6   A0A1A9VCU2   W5J7F4   A0A2M4CG85   A0A1B0GDF3   B3M0B2   A0A1A9WGU6   A0A1A9YBD2  

Pubmed

19121390    28756777    26354079    20566863    23537049    18362917    + More
19820115    20798317    21719571    28004739    21347285    28648823    20075255    24508170    30249741    17510324    20966253    26999592    12364791    14747013    17210077    25348373    26483478    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    11336699    17550304    15632085    24495485    25830018    20920257    23761445   

EMBL

BABH01023048    BABH01023049    BABH01023050    BABH01023051    ODYU01004479    SOQ44390.1    + More
KZ150093    PZC73661.1    KQ460889    KPJ11076.1    NWSH01000904    PCG73599.1    GECU01015884    JAS91822.1    GEDC01013060    JAS24238.1    AAZO01007167    DS235875    EEB19753.1    APGK01053113    KB741221    ENN72418.1    KQ971338    EFA02083.1    KB632081    ERL88580.1    GEDC01000227    JAS37071.1    KQ435740    KOX76823.1    KQ977588    KYN01662.1    GBYB01013428    JAG83195.1    GBYB01013429    JAG83196.1    GL438862    EFN68155.1    KQ434886    KZC10091.1    GL888237    EGI64225.1    GEZM01036475    JAV82663.1    GL448723    EFN83968.1    KQ981215    KYN44537.1    KQ976565    KYM80519.1    ADTU01002872    ADTU01002873    ADTU01002874    NNAY01000460    OXU28226.1    KQ982316    KYQ57825.1    LBMM01011755    KMQ86647.1    AAZX01012718    KQ979074    KYN22766.1    GANO01002803    JAB57068.1    UFQS01000006    UFQT01000006    SSW97055.1    SSX17442.1    KK108171    QOIP01000009    EZA46840.1    RLU18465.1    AJWK01010106    AXCM01000656    GGFL01003235    MBW67413.1    GFDL01013835    JAV21210.1    CH477447    EAT40732.1    GFDL01013958    JAV21087.1    GFDL01013875    JAV21170.1    GDUN01000269    JAN95650.1    AXCN02001520    APCN01000838    APCN01000839    DS231993    EDS30822.1    KQ759874    OAD62355.1    AAAB01008987    EAA01183.5    GAKP01016447    JAC42505.1    JXUM01067266    JXUM01067267    KQ562441    KXJ75910.1    CP012526    ALC47187.1    CH933806    EDW16537.2    CH964251    EDW83172.2    CH479186    EDW39137.1    CM000364    EDX12208.1    AE014297    AGB96148.1    AGB96147.1    BT031160    ABX00782.1    ACZ94961.1    OUUW01000007    SPP82564.1    AF210315    AAF19646.1    AAF55786.2    SPP82565.1    AGB96146.1    CH480842    EDW49646.1    SPP82569.1    SPP82566.1    SPP82568.1    SPP82567.1    CH954181    EDV48368.1    CH940650    EDW67692.2    AGB96145.1    CM000160    EDW96153.2    CM000070    EAL26927.3    GAMC01014900    JAB91655.1    GAMC01014899    JAB91656.1    GDHF01014669    JAI37645.1    GDHF01007946    JAI44368.1    GBXI01016222    GBXI01009585    GBXI01007535    JAC98069.1    JAD04707.1    JAD06757.1    CH916374    EDV91086.1    ADMH02002125    ETN58719.1    GGFL01000091    MBW64269.1    CCAG010011868    CCAG010011869    CCAG010011870    CH902617    EDV43118.2   

Proteomes

UP000005204    UP000053240    UP000218220    UP000009046    UP000019118    UP000007266    + More
UP000030742    UP000005203    UP000053105    UP000078542    UP000000311    UP000076502    UP000007755    UP000008237    UP000078541    UP000078540    UP000005205    UP000215335    UP000075809    UP000036403    UP000002358    UP000078492    UP000192223    UP000053097    UP000279307    UP000092461    UP000075920    UP000075883    UP000075880    UP000008820    UP000075882    UP000075886    UP000069272    UP000075840    UP000075902    UP000002320    UP000007062    UP000076407    UP000075903    UP000075885    UP000069940    UP000249989    UP000092553    UP000009192    UP000007798    UP000008744    UP000000304    UP000000803    UP000268350    UP000001292    UP000008711    UP000008792    UP000002282    UP000192221    UP000001819    UP000001070    UP000078200    UP000000673    UP000092444    UP000007801    UP000091820    UP000092443   

PRIDE

H9JIW5    Q9U3Y7    Q9VDK5   

Pfam

PF00628   PHD        + More
PF00643   zf-B_box
PF00439   Bromodomain
PF14634   zf-RING_5

Interpro

IPR001487   Bromodomain        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR011011   Znf_FYVE_PHD       
IPR001841   Znf_RING       
IPR000315   Znf_B-box       
IPR036427   Bromodomain-like_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR019787   Znf_PHD-finger       
IPR017907   Znf_RING_CS       
IPR003649   Bbox_C       
IPR018359   Bromodomain_CS       

SUPFAM

SSF47370   SSF47370        + More
SSF57903   SSF57903       

Gene 3D

1.20.920.10     3.30.40.10    

CDD

cd00021  BBOX

ProteinModelPortal

H9JIW5   A0A2H1VU95   A0A2W1BHB7   A0A0N1IEN8   A0A2A4JP59   A0A1B6IY34   + More
A0A1B6DEW6   E0W297   N6T463   D2A1V1   U4UF87   A0A1B6EGQ1   A0A087ZRN1   A0A0M9A6B6   A0A151IHM5   A0A0C9QFX6   A0A0C9RAF0   E2AEJ8   A0A154PE21   F4WNN2   A0A1Y1MAH6   E2BK17   A0A195FW41   A0A195B8J9   A0A158NV25   A0A232FBL6   A0A151XBT7   A0A0J7K8I6   K7J4U0   A0A195ECC9   U5ETF3   A0A1W4X2Z3   A0A336LHI4   A0A026VT47   A0A1B0CFH2   A0A182VVR7   A0A182MGV7   A0A182J258   A0A2M4CQ35   A0A1Q3F0X8   Q171T5   A0A182L8U7   A0A1Q3F0K5   A0A1Q3F0T7   A0A0P6IXD7   A0A182R135   A0A182FSQ9   A0A182HKK9   A0A182U0S1   B0WM08   A0A310SM92   Q7PXC0   A0A182X9M5   A0A182VL25   A0A034VL02   A0A182P9L7   A0A182GJ32   A0A0M4F5L2   B4K8F5   B4NFV5   B4GN11   B4QS12   A0A0B4KHG7   A0A0B4KHT0   A8WHL4   A0A3B0JJN1   Q9U3Y7   Q9VDK5   A0A3B0JK23   A0A0B4KH12   B4IIA2   A0A3B0K920   A0A3B0KA76   A0A3B0KG02   A0A3B0JJN0   B3NYW5   B4LWM7   A0A0B4KGE5   B4PPQ3   A0A1W4VA75   A0A1W4V9S7   A0A1W4VB52   A0A1W4V9S2   A0A1W4UXW0   Q29BS0   W8AS25   W8BEM5   A0A0K8VGH5   A0A0K8VZM9   A0A0A1X6K7   B4JUB6   A0A1A9VCU2   W5J7F4   A0A2M4CG85   A0A1B0GDF3   B3M0B2   A0A1A9WGU6   A0A1A9YBD2  

PDB

2YVR     E-value=1.03468e-08,     Score=144

KEGG

101740174    K08883 tripartite motif-containing protein 33 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase T

GO

GO:0008270   GO:0016874   GO:0007411   GO:0003682   GO:0004842   GO:0005634   GO:0016567   GO:0006325   GO:0000790   GO:0005622   GO:0005515   GO:0046983   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

510

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00115

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00108

outside

1  -  510

 

 

Pi

192.818725

Theta

157.23645

Tajima's D

0.729859

CLR

0.290435

CSRT

0.583670816459177

Interpretation

Uncertain