Gene

KWMTBOMO08199  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009468

Annotation

PREDICTED:_charged_multivesicular_body_protein_2a_[Amyelois_transitella]

Location

Bomo_Chr14(-):1664137-1668119      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.483

CDS

ATGATGGAGTGGTTATTTGGTCACAAGATGACTCCAGATGAGATGCTGCGCAAGAATCAGCGAGCTCTCAACAAGGCCATGAGAGACCTGGACCGTGAACGAATGAAAATGGAACAGCAAGAGAAGAAGGTCATTGCTGACATTAAAAAGCTAGCTAAAGAAGGACAAATGGATGCTGTTAAAATCATGGCAAAAGACTTAGTACGTACCAGACGATATGTCCGCAAGTTCATGTTAATGAAAGCGAACATCCAAGCGGTGTCACTGAAGATACAAACTCTCAAGTCTCAGAGCACCATGGCGCAGGCGATGAAGGGAGTCACTCGTGCCATGGCTACTATGAATAGACAACTAAACATGCCACAGATACAAAAGATATTACAGGAGTTTGAAAAGCAGTCTGAAATTATGGATATGAAGGAGGAGATGATGAATGACTCCATCGATGAAGCGATGGAGGGAGACGATGATGAAGAAGAAAGTGACGCCGTCGTGTCACAGATCTTGGACGAGCTGGGCCTGCAGCTGAACGACACGCTGTCCGGGCTACCTCAGGCCACTGGATCCCTCTCTGTTGCCGCGAAGACCCCGGCGTCCCCGACGGCGGTGGCGGGCGGCGCCGGAGCCCCCGTGTCGGACGCGGACGCCGAGCTGCAGGCCCGCCTCGACAACCTGCGCCGGGAGTAG

Protein

MMEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDMKEEMMNDSIDEAMEGDDDEEESDAVVSQILDELGLQLNDTLSGLPQATGSLSVAAKTPASPTAVAGGAGAPVSDADAELQARLDNLRRE

Uniprot

A0A2H1WXL2   A0A2W1BK58   H9JIW7   A0A1E1WH55   A0A0N0PBL2   A0A212EW93   + More
A0A2A4JQA0   S4NWJ4   A0A437B3E5   A0A194PY96   A0A0J7KWQ8   A0A088A330   A0A026WLI1   A0A0N0BD81   A0A2A3EAS2   V9IC29   A0A154PG45   E9IW29   E2AM53   E2BJ37   U5EYT7   Q17LI1   V5H307   A0A182FRM6   A0A182GIB2   A0A195CMG9   A0A2M4BYX9   F4X0W9   A0A158N9F6   B0X7L4   A0A232EU63   K7J2S4   A0A2M4AH03   A0A1L8DW04   A0A182V834   A0A182U680   A0A182L8R5   A0A182X9I9   Q7PUC1   A0A182HKH2   A0A0L7QQQ2   A0A182PRQ0   A0A2R7VWL0   A0A182K523   A0A151JVQ5   A0A084VXS0   A0A182VVV2   A0A2M3Z5D1   A0A182RVR2   A0A182QN77   A0A182NQM1   W5J4Y8   A0A182J6S3   A0A195E1G7   A0A182LZ98   A0A182YBG0   A0A310S7J9   A0A1Q3FHI5   A0A023EK05   A0A2J7PCH8   A0A224XJG2   A0A069DXK9   A0A0P4VKY7   R4G5C3   A0A1W4XFM6   A0A2P8Z989   A0A0A9VQT9   D2A197   A0A1B6FYK0   A0A1B6IHK6   E0VBI0   J3JVP8   A0A1A9WF51   A0A1B6KZ58   B4NK38   D3TNP7   A0A1A9XEX2   A0A1B0BEV7   U4UBM3   B4GEF8   B4ICI7   A0A023F9M4   A0A0L0C5Y8   B4QW22   B3P6A4   Q9VBI3   A0A3B0K5U3   A0A1W4V901   Q296Z4   B4PSX0   W8CDQ0   A0A1A9VDZ4   A0A0M5IZZ6   B4JGJ5   A0A0K8USG6   A0A034W4Y8   A0A0A1X9F0   A0A1L8EEA0   N6U6V0   A0A1I8PBQ9  

Pubmed

28756777    19121390    26354079    22118469    23622113    24508170    + More
30249741    21282665    20798317    17510324    26483478    21719571    21347285    28648823    20075255    20966253    12364791    14747013    17210077    24438588    20920257    23761445    25244985    24945155    26334808    27129103    29403074    25401762    26823975    18362917    19820115    20566863    22516182    17994087    20353571    23537049    25474469    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    17550304    24495485    25348373    25830018   

EMBL

ODYU01011840    SOQ57813.1    KZ150093    PZC73657.1    BABH01023047    GDQN01004863    + More
JAT86191.1    KQ460889    KPJ11071.1    AGBW02012057    OWR45753.1    NWSH01000904    PCG73592.1    GAIX01012517    JAA80043.1    RSAL01000178    RVE44996.1    KQ459585    KPI98311.1    LBMM01002501    KMQ94733.1    KK107154    QOIP01000001    EZA56808.1    RLU27166.1    KQ435878    KOX70068.1    KZ288322    PBC28161.1    JR039394    AEY58673.1    KQ434896    KZC10802.1    GL766449    EFZ15208.1    GL440706    EFN65486.1    GL448558    EFN84187.1    GANO01000131    JAB59740.1    CH477215    EAT47555.1    GALX01001238    JAB67228.1    JXUM01065565    KQ562354    KXJ76092.1    KQ977565    KYN01921.1    GGFJ01008980    MBW58121.1    GL888503    EGI59911.1    ADTU01009631    DS232454    EDS42026.1    NNAY01002172    OXU21874.1    GGFK01006733    MBW40054.1    GFDF01003491    JAV10593.1    AAAB01008987    EAA01777.4    APCN01000830    KQ414786    KOC60879.1    KK854135    PTY11893.1    KQ981713    KYN37381.1    ATLV01018205    KE525224    KFB42764.1    GGFM01002976    MBW23727.1    AXCN02001514    ADMH02002105    ETN59026.1    KQ979814    KYN18973.1    AXCM01000928    KQ765605    OAD53847.1    GFDL01008019    JAV27026.1    GAPW01004162    JAC09436.1    NEVH01027059    PNF14034.1    GFTR01003800    JAW12626.1    GBGD01002800    JAC86089.1    GDKW01000822    JAI55773.1    GAHY01000665    JAA76845.1    PYGN01000141    PSN53063.1    GBHO01044802    GBRD01011504    GDHC01015497    JAF98801.1    JAG54320.1    JAQ03132.1    KQ971338    EFA01563.1    GECZ01020734    GECZ01020070    GECZ01020034    GECZ01014511    GECZ01003461    JAS49035.1    JAS49699.1    JAS49735.1    JAS55258.1    JAS66308.1    GECU01021313    JAS86393.1    DS235030    EEB10736.1    BT127316    AEE62278.1    GEBQ01026314    GEBQ01023250    GEBQ01017796    GEBQ01015611    GEBQ01011774    GEBQ01011753    GEBQ01009681    GEBQ01001530    JAT13663.1    JAT16727.1    JAT22181.1    JAT24366.1    JAT28203.1    JAT28224.1    JAT30296.1    JAT38447.1    CH964272    EDW85080.1    EZ423049    ADD19325.1    JXJN01013032    KB632012    ERL88001.1    CH479182    EDW33993.1    CH480828    EDW45083.1    GBBI01000535    JAC18177.1    JRES01000953    KNC26829.1    CM000364    EDX14521.1    CH954182    EDV53574.1    AE014297    BT003747    AAF56559.1    AAO41408.1    OUUW01000023    SPP89574.1    CM000070    EAL28312.2    CM000160    EDW98657.1    GAMC01001561    JAC04995.1    CP012526    ALC46736.1    CH916369    EDV93692.1    GDHF01023044    JAI29270.1    GAKP01010124    JAC48828.1    GBXI01006957    JAD07335.1    GFDG01001771    JAV17028.1    APGK01040441    KB740981    ENN76371.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000283053    UP000053268    + More
UP000036403    UP000005203    UP000053097    UP000279307    UP000053105    UP000242457    UP000076502    UP000000311    UP000008237    UP000008820    UP000069272    UP000069940    UP000249989    UP000078542    UP000007755    UP000005205    UP000002320    UP000215335    UP000002358    UP000075903    UP000075902    UP000075882    UP000076407    UP000007062    UP000075840    UP000053825    UP000075885    UP000075881    UP000078541    UP000030765    UP000075920    UP000075900    UP000075886    UP000075884    UP000000673    UP000075880    UP000078492    UP000075883    UP000076408    UP000235965    UP000192223    UP000245037    UP000007266    UP000009046    UP000091820    UP000007798    UP000092443    UP000092460    UP000030742    UP000008744    UP000001292    UP000037069    UP000000304    UP000008711    UP000000803    UP000268350    UP000192221    UP000001819    UP000002282    UP000078200    UP000092553    UP000001070    UP000019118    UP000095300   

PRIDE

H9JIW7   

Pfam

PF03357   Snf7

Interpro

IPR005024   Snf7_fam       

ProteinModelPortal

A0A2H1WXL2   A0A2W1BK58   H9JIW7   A0A1E1WH55   A0A0N0PBL2   A0A212EW93   + More
A0A2A4JQA0   S4NWJ4   A0A437B3E5   A0A194PY96   A0A0J7KWQ8   A0A088A330   A0A026WLI1   A0A0N0BD81   A0A2A3EAS2   V9IC29   A0A154PG45   E9IW29   E2AM53   E2BJ37   U5EYT7   Q17LI1   V5H307   A0A182FRM6   A0A182GIB2   A0A195CMG9   A0A2M4BYX9   F4X0W9   A0A158N9F6   B0X7L4   A0A232EU63   K7J2S4   A0A2M4AH03   A0A1L8DW04   A0A182V834   A0A182U680   A0A182L8R5   A0A182X9I9   Q7PUC1   A0A182HKH2   A0A0L7QQQ2   A0A182PRQ0   A0A2R7VWL0   A0A182K523   A0A151JVQ5   A0A084VXS0   A0A182VVV2   A0A2M3Z5D1   A0A182RVR2   A0A182QN77   A0A182NQM1   W5J4Y8   A0A182J6S3   A0A195E1G7   A0A182LZ98   A0A182YBG0   A0A310S7J9   A0A1Q3FHI5   A0A023EK05   A0A2J7PCH8   A0A224XJG2   A0A069DXK9   A0A0P4VKY7   R4G5C3   A0A1W4XFM6   A0A2P8Z989   A0A0A9VQT9   D2A197   A0A1B6FYK0   A0A1B6IHK6   E0VBI0   J3JVP8   A0A1A9WF51   A0A1B6KZ58   B4NK38   D3TNP7   A0A1A9XEX2   A0A1B0BEV7   U4UBM3   B4GEF8   B4ICI7   A0A023F9M4   A0A0L0C5Y8   B4QW22   B3P6A4   Q9VBI3   A0A3B0K5U3   A0A1W4V901   Q296Z4   B4PSX0   W8CDQ0   A0A1A9VDZ4   A0A0M5IZZ6   B4JGJ5   A0A0K8USG6   A0A034W4Y8   A0A0A1X9F0   A0A1L8EEA0   N6U6V0   A0A1I8PBQ9  

PDB

6E8G     E-value=3.74728e-10,     Score=152

KEGG

101746321    K12191 charged multivesicular body protein 2A | (RefSeq) charged multivesicular body protein 2a

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0007034   GO:0015031   GO:0032509   GO:0045324   GO:0000815   GO:0005771   GO:0005769   GO:0043162   GO:0016197   GO:0008270   GO:0045454   GO:0046983   GO:0005515   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

228

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00298

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03327

outside

1  -  228

 

 

Pi

213.304822

Theta

185.171015

Tajima's D

0.491096

CLR

0.071005

CSRT

0.506924653767312

Interpretation

Uncertain