Gene

KWMTBOMO08198

Pre Gene Modal

BGIBMGA009494

Annotation

PREDICTED:_lysoplasmalogenase-like_protein_TMEM86A_[Amyelois_transitella]

Location

Bomo_Chr14(+):1640360-1647884      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.629

CDS

ATGATTTCCCCTACTGCATTGGTAAAAAGGGTGGGGGTGGGCGGTCGTCTCGTCCCATTCTTCAAATGTGTCTGCGTGTATTTCCTGGCCATGGGCGCGGGTGGGAGCGATCCATCCTTGATCGGCGTGGCAACAAAATGCGCTCCGATACTTTGCCTGCTACTCGTCGTGGTTCTACACCATGGATCCTTGCCTTATGAGAAAGGTTGGTACGCGCGACGGATCGCGGCCGGTCTGGCTCTATCAGCCCTGGGCGATGCCTTCCTGGTTTGGCCGCAGCACTTCATCGCGGGCATGGCGGCCTTTGCGGCTGCCCACATATCCTACATATCAGCTTTCCGGTTCACCCCGCTCGCGAAGCCATTAGCACCTATCGTCTACTCGGGTTGCGGGTACTACATGACCTTGATAACTCCGCCTGATGGATTGAAGGTGTTGGTACCGGTGTACGGAATGTTATTGAGTACAATGGCATGGAGGGGCCTGGCCAGGGGTCGGGCGGCGGCTGTCGGTGCTGTACTGTTCCTGATATCTGATGCTATACTAGGGTACAGCCTATTTGGAGGACCGTAG

Protein

MISPTALVKRVGVGGRLVPFFKCVCVYFLAMGAGGSDPSLIGVATKCAPILCLLLVVVLHHGSLPYEKGWYARRIAAGLALSALGDAFLVWPQHFIAGMAAFAAAHISYISAFRFTPLAKPLAPIVYSGCGYYMTLITPPDGLKVLVPVYGMLLSTMAWRGLARGRAAAVGAVLFLISDAILGYSLFGGP

Uniprot

H9JIZ3   A0A212EWD2   A0A154PHS0   A0A310SC69   A0A0M8ZY85   A0A2A3E524   + More
A0A087ZY52   A0A0L7R0P4   A0A3L8DID6   A0A195FR20   A0A158NA31   E9IXL7   F4WC27   K7JCT3   E2A5R4   E2B880   A0A1B6CW54   A0A0P5YDU3   E9FWP2   A0A0P5GT30   A0A0P5Y904   A0A0N8ASQ6   A0A0P6DPW4   A0A0P4ZE17   A0A0P5N1Y3   A0A0P5MIW0   A0A0P5AC23   A0A0P5AE42   A0A0P6AWR2   A0A0P6HG00   A0A2J7PSE3   A0A2Y9P3X3   A0A2Y9P6P5   A0A0P6AZL6   A0A0N8B0Y1   A0A2Y9P929   A0A2Y9P6P0   A0A0P4ZZL8   A0A341C807   A0A067QX94   A0A384A2I6   A0A341C803   A0A384A261   A0A0P5NBP6   A0A0P5YHT1   A0A0N8EC92   A0A0N1PIB9   S9XKE0   A0A1B6K172   A0A340Y8G3   A0A340Y494   T1JLT3   A0A0P5TQJ4   A0A1B6GGQ2   A0A2Y9R999   A0A444TRS5   A0A1B6LWI5   A0A1B6MS05   A0A2Y9EKA4   A0A2Y9PEU7   A0A2Y9PGH7   A0A2Y9EI79   F7AFA1   A0A139WIV7   A0A293M2S3  

Pubmed

19121390    22118469    30249741    21347285    21282665    21719571    + More
20075255    20798317    21292972    24845553    26354079    23149746    17431167    18362917    19820115   

EMBL

BABH01023044    BABH01023045    AGBW02012057    OWR45754.1    KQ434912    KZC11373.1    + More
KQ769812    OAD52843.1    KQ435826    KOX72019.1    KZ288369    PBC26788.1    KQ414670    KOC64408.1    QOIP01000007    RLU20204.1    KQ981305    KYN42918.1    ADTU01009955    GL766762    EFZ14627.1    GL888070    EGI68007.1    AAZX01014685    GL437023    EFN71261.1    GL446286    EFN88082.1    GEDC01024980    GEDC01023668    GEDC01019684    GEDC01006691    GEDC01004536    JAS12318.1    JAS13630.1    JAS17614.1    JAS30607.1    JAS32762.1    GDIP01059221    JAM44494.1    GL732526    EFX88398.1    GDIQ01236060    GDIQ01116352    JAK15665.1    GDIP01061168    JAM42547.1    GDIQ01246611    JAK05114.1    GDIQ01075415    JAN19322.1    GDIP01218299    JAJ05103.1    GDIQ01155989    JAK95736.1    GDIQ01155988    JAK95737.1    GDIP01205645    JAJ17757.1    GDIP01203447    JAJ19955.1    GDIP01029859    JAM73856.1    GDIQ01019978    JAN74759.1    NEVH01021931    PNF19257.1    GDIP01022091    JAM81624.1    GDIQ01223611    JAK28114.1    GDIP01209253    JAJ14149.1    KK852907    KDR13993.1    GDIQ01144393    JAL07333.1    GDIP01057513    JAM46202.1    GDIQ01040932    JAN53805.1    KQ460889    KPJ11070.1    KB016491    EPY88134.1    GECU01002497    JAT05210.1    JH432130    GDIP01123010    JAL80704.1    GECZ01008145    JAS61624.1    SAUD01000821    RXG72631.1    GEBQ01027304    GEBQ01011926    JAT12673.1    JAT28051.1    GEBQ01010493    GEBQ01001266    JAT29484.1    JAT38711.1    JSUE03022357    KQ971338    KYB27846.1    GFWV01010544    MAA35273.1   

Proteomes

UP000005204    UP000007151    UP000076502    UP000053105    UP000242457    UP000005203    + More
UP000053825    UP000279307    UP000078541    UP000005205    UP000007755    UP000002358    UP000000311    UP000008237    UP000000305    UP000235965    UP000248483    UP000252040    UP000027135    UP000261681    UP000053240    UP000265300    UP000248480    UP000288706    UP000248484    UP000006718    UP000007266   

PRIDE

H9JIZ3   

Pfam

PF07947   YhhN        + More
PF04499   SAPS

Interpro

IPR012506   YhhN        + More
IPR007587   SAPS       
IPR016024   ARM-type_fold       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

H9JIZ3   A0A212EWD2   A0A154PHS0   A0A310SC69   A0A0M8ZY85   A0A2A3E524   + More
A0A087ZY52   A0A0L7R0P4   A0A3L8DID6   A0A195FR20   A0A158NA31   E9IXL7   F4WC27   K7JCT3   E2A5R4   E2B880   A0A1B6CW54   A0A0P5YDU3   E9FWP2   A0A0P5GT30   A0A0P5Y904   A0A0N8ASQ6   A0A0P6DPW4   A0A0P4ZE17   A0A0P5N1Y3   A0A0P5MIW0   A0A0P5AC23   A0A0P5AE42   A0A0P6AWR2   A0A0P6HG00   A0A2J7PSE3   A0A2Y9P3X3   A0A2Y9P6P5   A0A0P6AZL6   A0A0N8B0Y1   A0A2Y9P929   A0A2Y9P6P0   A0A0P4ZZL8   A0A341C807   A0A067QX94   A0A384A2I6   A0A341C803   A0A384A261   A0A0P5NBP6   A0A0P5YHT1   A0A0N8EC92   A0A0N1PIB9   S9XKE0   A0A1B6K172   A0A340Y8G3   A0A340Y494   T1JLT3   A0A0P5TQJ4   A0A1B6GGQ2   A0A2Y9R999   A0A444TRS5   A0A1B6LWI5   A0A1B6MS05   A0A2Y9EKA4   A0A2Y9PEU7   A0A2Y9PGH7   A0A2Y9EI79   F7AFA1   A0A139WIV7   A0A293M2S3  

KEGG

101746176    no KO assigned | (RefSeq) lysoplasmalogenase

GO

GO:0016021   GO:0047408   GO:0016020   GO:0046485   GO:0047409   GO:0005737   GO:0008270   GO:0045454   GO:0046983   GO:0005515   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR31885   PTHR12634  

Length:

190

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

114.89115

Exp number, first 60 AAs:

41.62609

Total prob of N-in:

0.98026

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  39

TMhelix

40  -  62

inside

63  -  74

TMhelix

75  -  97

outside

98  -  131

TMhelix

132  -  154

inside

155  -  166

TMhelix

167  -  189

outside

190  -  190

 

 

Pi

23.204584

Theta

187.437229

Tajima's D

0.696038

CLR

0.411238

CSRT

0.569221538923054

Interpretation

Uncertain