Gene

KWMTBOMO08196

Pre Gene Modal

BGIBMGA009471

Annotation

PREDICTED:_rho_GTPase-activating_protein_26_[Bombyx_mori]

Location

Bomo_Chr14(-):1571891-1631759      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.14

CDS

ATGGGCGTGGGTCTGCAGCCTCTAGAGTTCACCGAGTGCCTCGCGGACAGCCCTCAGTTCCGCGAGAATCTCCAACGTCACGAAAAGGAACTAGAACGAACCAGCCAGCAGATCAAGCGGCTCATCAAAGAAGTCAAGGATGTCGTGCAGGCAGCTAAACGTCTCGGCAGCGCTCAGCTGGCGCTGGCATCGAGCATGGAGCAGTTCGAGTTCGCCTGCATCGGTGCATCCATGACGGAAGACGAGCGCGTTATAGGACGCTCCCTGCACCACTTCGCCCATCTAATAAGGACCATAGAGGAAGAGAGGGAACGAATGTTGGGCAGAGCGCACGAGCAAATAATTCAGCCCCTGGAGAAGTTCCGGAAAGAACATATCGGTGCTGTCAAGGAAGGAAAAAAGAAATTCGATAAGAAGACTGCGAAGTTCTGTCAAACGCAAGAACGCACGTTGTCGCTGTCTTTGAAGAAACCAGAGACTGTCTTCCAAGAGGCTGATGCGGCAATGGACATGGCCGAGCGCGACTTCTGCCAGGCCTCCCTCGAGTACGTGTTCCAGCTGCAAGCCGTCCAGGAGAGGAAGAAGTTCGAGCTGGTGGAGACGCTGCTCGGCTTCGTCTTCGGCTGGTGGACCTTCCACCACACGGCGCACGACGTCCACGCCGACGCCGAGCCCAGGGTGCGCGATCTGCAACTCAGGATACAACGAACGAGGAGTAATTTCGAAGAGACAAGCAAACAGACTGAATCACTCATGAAGAAGATGATGGAAGTGCGGCAAATGTCCAAAGAAGAGGACGGAAGCGACGACGGCCCCGGGGGCGTGTCCAGAGCCGGGTACCTGTTCCTCATGGAGAAAAAGGCCTTCGGTACGACGACGTGGAGCAAGCAGTTCTGCACGTACGAGAAGAGATCCCGGATCCTGACCCTGACGCCGTACAATCAGATCAACGTCAAAACGAGCTGGTCTCCCGAGGCCGTGTGTCTGTGCGGCGCCGTGGCTTGCGGTGAGGCGGCGGAGCGGCGTTGGTGCTGGGAGGCAATCCCCGCAGACCGCGAGCGCAGCCCCCTCACGCTGCAGGCGCTCTCGCAGCGGGACCGCGCCGCCTGGCTCGCGGCCGTCGACGAGCCCCCCGCCGAGAGACACCCGCAGAAAGCATCTGTGAACAGTGAAGAGTTTGCGTTAGACGAAACGGGATTCGCCTTCGTGCGGAAGCTGATATCCGTGATAGAGTCGAGGGGGCTGGAGGAGCAGGGACTGTACAGGGTGGCGGGCGTGGCGTCCAAGGTGTCGCGGCTGGTGGCGTGCGGCGCGCCGGGCCGCCGCCTGCCGCCCGCGCTCCACGACCCGCTGGAGTGGGAGACCAAGACCCTGACCTCCGCGCTCAAGAGCTACCTGCGCGCGCTGCCCGACCCGCTGCTCACCCGCGCGCTGCACGACCGCTTCATCGCCGTCGTCAAGTGCGAGCGGCGGGCGGAGCGCGCGGCGGGCGTGTGCGAGCTGGTGCGCGCGCTGCCGCCGCACAACCGGGACATGCTGCTGCTGGTGCTGGCACACCTGCGGAAGGTAGCGGCGAAGAGCGATAAGAACCTAATGTCGGAGTCGAACCTGGCGGTCTGCTTCGGGCCCACGCTGCTGAGGCCGGAGCGTGAGACGGTGGCGTCCATACTGGAGCTCAAGTTCTACAACGTGCTGGTGGAGACCATGCTCGAGAACTACGACGAGATCTTCGAGGCCGGCCCCCCCGCCCCGCCCGCGCACAACGGCCTGCTCAGAACGTCGCCGACCGCGTTACCGACAGCGTCGAGGAATGATATCAGCTTGGTAGGCGCGGGCGGCATAGCGGCCGGCGTGGGGCCCGGCGCGCGATACTCGCCCCACCACCACCAGCTGCTGCAACACTTCACCCACCCGCACCCCCTCGCTCATGCGGGAGTGGGGCGCTCCAGCAGCAGCTCGGCCGAGTCGGTGTCCAGCGCGTCGCCCCCGCCCGGAGCCCCGGCCTCCGCCCTCCGCCCGCAACGCTGCACGTGA

Protein

MGVGLQPLEFTECLADSPQFRENLQRHEKELERTSQQIKRLIKEVKDVVQAAKRLGSAQLALASSMEQFEFACIGASMTEDERVIGRSLHHFAHLIRTIEEERERMLGRAHEQIIQPLEKFRKEHIGAVKEGKKKFDKKTAKFCQTQERTLSLSLKKPETVFQEADAAMDMAERDFCQASLEYVFQLQAVQERKKFELVETLLGFVFGWWTFHHTAHDVHADAEPRVRDLQLRIQRTRSNFEETSKQTESLMKKMMEVRQMSKEEDGSDDGPGGVSRAGYLFLMEKKAFGTTTWSKQFCTYEKRSRILTLTPYNQINVKTSWSPEAVCLCGAVACGEAAERRWCWEAIPADRERSPLTLQALSQRDRAAWLAAVDEPPAERHPQKASVNSEEFALDETGFAFVRKLISVIESRGLEEQGLYRVAGVASKVSRLVACGAPGRRLPPALHDPLEWETKTLTSALKSYLRALPDPLLTRALHDRFIAVVKCERRAERAAGVCELVRALPPHNRDMLLLVLAHLRKVAAKSDKNLMSESNLAVCFGPTLLRPERETVASILELKFYNVLVETMLENYDEIFEAGPPAPPAHNGLLRTSPTALPTASRNDISLVGAGGIAAGVGPGARYSPHHHQLLQHFTHPHPLAHAGVGRSSSSSAESVSSASPPPGAPASALRPQRCT

Uniprot

A0A194PY97   A0A212FC52   A0A191UR79   A0A0C9Q743   A0A154PE05   A0A0M9A447   + More
A0A087ZRM9   A0A0L7R5T3   A0A1B6K0Y2   E2AEJ4   A0A1B6KCG6   A0A1B6KSM0   A0A1B6L4C8   A0A1B6L5F2   A0A232FDI1   A0A195BWM0   F4WRU0   A0A151XIT4   A0A158NEM0   A0A195CRI1   A0A195FKM3   A0A023F3M9   A0A067R0J4   A0A026WRR8   E2BT36   K7ITA3   A0A195ENT9   A0A0P5QT38   A0A3L8DEC5   A0A0P5I269   A0A0P5DKE9   A0A0P5GHV4   A0A0P5GNE1   A0A0P5GWH8   A0A0P5R2Y1   A0A0P5GMF9   A0A0P5I2A3   A0A0P5I814   A0A0P5HIV5   A0A0N8A1Q2   A0A0P5JZC5   A0A0P5HFQ8   A0A0P5Q2C3   A0A0P6IUU3   A0A0P6FRR2   A0A0P5B1D4   A0A0P5GBY7   A0A0P5HMV5   A0A0P5YUP9   A0A0P6AGY0   A0A0P5KVT1   A0A0P6GAC5   A0A1Y1LRG4   A0A1Y1LRF5   A0A2A3ER43   E9GSI6   A0A2H8TFJ3   A0A2S2NMQ4   J9JV82   T1HVB1   V5G502   A0A310SU94   A0A1S4EA17   A0A0A9ZDM2   A0A0K8T650   A0A0P5BCG3   A0A131Z5H7   A0A1S3JSA8   A0A0N8A5X1   A0A1Q3FTJ4   A0A1Q3FTK4   A0A131Z3Q1   A0A131YFE9   T1JFW8   A0A224Z5N1   A0A0P4YQN3   A0A182FLX3   A0A131XEE6   L7M711   A0A1E1X5U5   A0A2M4CHA7   A0A2M4CHL7   A0A0K8VHD9   A0A293LMB8   A0A0K2UZF5   A0A1S3JSF9   A0A0P5CD45   A0A0K8TZG8   A0A034VIS9   V5HZR0   A0A182QSY8   F5HLS9   A0A0P4YIE5   A0A1B0C9A1  

Pubmed

26354079    22118469    27142481    20798317    28648823    21719571    + More
21347285    25474469    24845553    24508170    20075255    30249741    28004739    21292972    25401762    26823975    26830274    28797301    28049606    25576852    28503490    25348373    25765539    12364791    14747013    17210077   

EMBL

KQ459585    KPI98307.1    AGBW02009223    OWR51311.1    KU365968    ANJ04684.1    + More
GBYB01009963    JAG79730.1    KQ434886    KZC10092.1    KQ435740    KOX76827.1    KQ414648    KOC66174.1    GECU01002601    JAT05106.1    GL438862    EFN68151.1    GEBQ01030834    JAT09143.1    GEBQ01025550    JAT14427.1    GEBQ01026999    GEBQ01021461    JAT12978.1    JAT18516.1    GEBQ01021116    GEBQ01001608    JAT18861.1    JAT38369.1    NNAY01000418    OXU28543.1    KQ976401    KYM92368.1    GL888292    EGI63097.1    KQ982080    KYQ60304.1    ADTU01013497    KQ977381    KYN03102.1    KQ981490    KYN41215.1    GBBI01002741    JAC15971.1    KK852794    KDR16415.1    KK107119    EZA58745.1    GL450325    EFN81166.1    AAZX01003313    AAZX01008304    KQ978625    KYN29577.1    GDIQ01110330    JAL41396.1    QOIP01000009    RLU18830.1    GDIQ01221591    JAK30134.1    GDIP01160970    JAJ62432.1    GDIQ01240439    JAK11286.1    GDIQ01241888    JAK09837.1    GDIQ01238734    JAK12991.1    GDIQ01112076    JAL39650.1    GDIQ01240438    JAK11287.1    GDIQ01219090    JAK32635.1    GDIQ01240437    JAK11288.1    GDIQ01232780    JAK18945.1    GDIP01191121    JAJ32281.1    GDIQ01193146    JAK58579.1    GDIQ01228582    JAK23143.1    GDIQ01120120    JAL31606.1    GDIQ01027449    JAN67288.1    GDIQ01061442    JAN33295.1    GDIP01191120    JAJ32282.1    GDIQ01243286    JAK08439.1    GDIQ01230836    JAK20889.1    GDIP01053154    JAM50561.1    GDIP01029396    JAM74319.1    GDIQ01178743    JAK72982.1    GDIQ01046605    JAN48132.1    GEZM01048972    GEZM01048971    JAV76233.1    GEZM01048973    JAV76232.1    KZ288202    PBC33511.1    GL732562    EFX77433.1    GFXV01000233    MBW12038.1    GGMR01005852    MBY18471.1    ABLF02040615    ABLF02040617    ACPB03009283    ACPB03009284    ACPB03009285    ACPB03009286    GALX01003336    JAB65130.1    KQ759874    OAD62359.1    GBHO01037387    GBHO01003689    GBHO01003688    GDHC01005368    JAG06217.1    JAG39915.1    JAG39916.1    JAQ13261.1    GBRD01005156    JAG60665.1    GDIP01201925    JAJ21477.1    GEDV01003186    JAP85371.1    GDIP01179369    JAJ44033.1    GFDL01004114    JAV30931.1    GFDL01004115    JAV30930.1    GEDV01003187    JAP85370.1    GEDV01011355    JAP77202.1    JH432190    GFPF01010354    MAA21500.1    GDIP01225274    JAI98127.1    GEFH01004580    JAP64001.1    GACK01005194    JAA59840.1    GFAC01004558    JAT94630.1    GGFL01000549    MBW64727.1    GGFL01000547    MBW64725.1    GDHF01014013    JAI38301.1    GFWV01009908    MAA34637.1    HACA01026079    CDW43440.1    GDIP01172335    JAJ51067.1    GDHF01032646    JAI19668.1    GAKP01016548    JAC42404.1    GANP01004230    JAB80238.1    AXCN02002217    AAAB01008949    EGK97240.1    GDIP01229523    JAI93878.1    AJWK01002077   

Proteomes

UP000053268    UP000007151    UP000076502    UP000053105    UP000005203    UP000053825    + More
UP000000311    UP000215335    UP000078540    UP000007755    UP000075809    UP000005205    UP000078542    UP000078541    UP000027135    UP000053097    UP000008237    UP000002358    UP000078492    UP000279307    UP000242457    UP000000305    UP000007819    UP000015103    UP000079169    UP000085678    UP000069272    UP000075886    UP000007062    UP000092461   

Pfam

PF00620   RhoGAP        + More
PF14604   SH3_9
PF00169   PH
PF07653   SH3_2

Interpro

IPR000198   RhoGAP_dom        + More
IPR008936   Rho_GTPase_activation_prot       
IPR027267   AH/BAR_dom_sf       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR001452   SH3_domain       
IPR036028   SH3-like_dom_sf       

SUPFAM

SSF103657   SSF103657        + More
SSF48350   SSF48350       
SSF50044   SSF50044       

Gene 3D

1.10.555.10     1.20.1270.60     2.30.29.30    

ProteinModelPortal

A0A194PY97   A0A212FC52   A0A191UR79   A0A0C9Q743   A0A154PE05   A0A0M9A447   + More
A0A087ZRM9   A0A0L7R5T3   A0A1B6K0Y2   E2AEJ4   A0A1B6KCG6   A0A1B6KSM0   A0A1B6L4C8   A0A1B6L5F2   A0A232FDI1   A0A195BWM0   F4WRU0   A0A151XIT4   A0A158NEM0   A0A195CRI1   A0A195FKM3   A0A023F3M9   A0A067R0J4   A0A026WRR8   E2BT36   K7ITA3   A0A195ENT9   A0A0P5QT38   A0A3L8DEC5   A0A0P5I269   A0A0P5DKE9   A0A0P5GHV4   A0A0P5GNE1   A0A0P5GWH8   A0A0P5R2Y1   A0A0P5GMF9   A0A0P5I2A3   A0A0P5I814   A0A0P5HIV5   A0A0N8A1Q2   A0A0P5JZC5   A0A0P5HFQ8   A0A0P5Q2C3   A0A0P6IUU3   A0A0P6FRR2   A0A0P5B1D4   A0A0P5GBY7   A0A0P5HMV5   A0A0P5YUP9   A0A0P6AGY0   A0A0P5KVT1   A0A0P6GAC5   A0A1Y1LRG4   A0A1Y1LRF5   A0A2A3ER43   E9GSI6   A0A2H8TFJ3   A0A2S2NMQ4   J9JV82   T1HVB1   V5G502   A0A310SU94   A0A1S4EA17   A0A0A9ZDM2   A0A0K8T650   A0A0P5BCG3   A0A131Z5H7   A0A1S3JSA8   A0A0N8A5X1   A0A1Q3FTJ4   A0A1Q3FTK4   A0A131Z3Q1   A0A131YFE9   T1JFW8   A0A224Z5N1   A0A0P4YQN3   A0A182FLX3   A0A131XEE6   L7M711   A0A1E1X5U5   A0A2M4CHA7   A0A2M4CHL7   A0A0K8VHD9   A0A293LMB8   A0A0K2UZF5   A0A1S3JSF9   A0A0P5CD45   A0A0K8TZG8   A0A034VIS9   V5HZR0   A0A182QSY8   F5HLS9   A0A0P4YIE5   A0A1B0C9A1  

PDB

1F7C     E-value=4.74724e-46,     Score=467

KEGG

101740041    K20071 Rho GTPase-activating protein 26 | (RefSeq) rho GTPase-activating protein 26

GO

GO:0007165   GO:0005096   GO:0016021   GO:0050660   GO:0045454   GO:0046983   GO:0005515   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

677

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00011

outside

1  -  677

 

 

Pi

221.654066

Theta

167.670581

Tajima's D

1.171225

CLR

0.373475

CSRT

0.705614719264037

Interpretation

Uncertain