SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08191
Pre Gene Modal
BGIBMGA009489
Annotation
PREDICTED:_uncharacterized_protein_LOC101739490_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.107
 

Sequence

CDS
ATGGGAGACCGAACGATTCGCAGGATTATCATACTCAACATACTCTTCGTAACGATAACCGCAGACTTCACGAACAACTGTCCGGAGCAATGCAAATGCAGCTGGGCTGGCGGCGACAAGCAGGCGGACTGCTCCCACGGCCACTTCGATGCGATCCCGAAAACTTTAAGCTCGGACATACAGAAACTGAACCTAACCGGCAACGACGTGTACGAAATAACAATACACGCCTTCCACGACGTCGGTCTCATAAACCTCTGGAAGCTGACGCTGAGTGAATGCAAACTGCAAACGATACAGAGAAGCGGCTTCTTCGGCCTCGGGATCATGATCGAATTGGACTTATCAAAGAACGACCTCAAGTCACTACACCCGGACCTCTTCAAGGAGACCCCGAAAATACGATGGATCCTACTCAACGACAACAAAATCGAAAAATTAGACGACGGATTGTTTAGCAACTTGGCCTATCTGCAGAAAGTCGATCTGAGCAACAACAGAATAGTACACATCGGAATGAAAACTTTCGTTAACATCCCAAAACTCAACTTCTTGAGGCTAGATAGCAACAAGCTGGAATACTTGAAAGGTGACACGTTAGAAGGCATCAGCTCCTTGTCTAACCTGGACGTGCAAGACAACCCTTGGCGTTGCGATTGCTACCTACAACCGTTCAGAAACTGGGTCATCAGCAAGAAGTTATACACTTCAAACGTTTACTGCGCTGACCCTCCGAAGGTACATGGGAAAACGTGGAAAGAACTCGACACCAACGATTTCGCATGCAGACCCAGTATTGTATACCCGTCGACGAGTACCACTCTGAGATCAGCAGACAACAACATCACCTTAGCTTGTCATGTCAACGGGAATCCATTACCAGAAGTCAACTGGGTGTTGAACGCACAAATCATTGATAGCACGTACCGATACGAAGGGGAAATTAAATACTACATCTCGCAAAGTAAAGGAGAGAACACCGAGTGGGTGAATTTGACAATAACGAATGTGGGTACAACTGATAATGGAGAGTATCTGTGTGTCGCCAAAAACCCGGGCGGAGTAGAAGAGAGGAGCGTAACTCTAGCTGTGGTCCAGACTCCGCCGGGCGTGATTGTTCCGACCGGCATGAACAATAACATGATGCCAGTTCTCATCGGAGTATCATGCACTGCAGCCATCATACTAATCATCCTCGTCATACTGTGTTACTGCTGCTGTAGAAGAAGAACTACTGATAAGAAAGCGGAGAACACTAACGGGGAAGCACTCATCGAAGGTTCTGTTATACCTGAAATGGAGAAGAGTTTGATAACTGCTGTGAATCCAGTGACGAAACCTCCGAGACGCTACGACGTTCCACCTTCAATTACCAGTGGTACTGAGATGTCTGAGTTGAATAAAACATTGCTGGACAATGATTCTGTATTTGCACACAACGAAGACGAAAAGCGGTCGCTGGGCTACGACCATTTGATGAAACCATCTCAAGATGCACTGAACGTAGAGTACGGCCGGACTGATGGCCGAGCTTACCCCCCTGATCTGCTGTCTTTCCCACCGAGAGCCGCGCAAATTTCGCCGGCTGCAAGCAACGCCTCAACTGTCCCTGATACGACGAGGCTGCCACCCCACCAACTCAACCCGGTCAGCCCCATCCATTCACCGATATACGGCATAACACCAAACCCGAACATGTTTAGAACCTTGCCGTACTCACGATCTCAATCACCGTTTACTGCTCCGATCACTTCCCCAGTGGTGACCCCTCGACAAGGCTACGTTACGATACCCAGAAGACCTAGAGTACCCAGTTGGTCCAGCACTGCGAGTACCCAAATCCTACCCAGTTCGGAGGCTCAAGAGCCTTTGTATGATAACTTGGGTTTAAGAACTACAGCTGACGGAAGTTCCGTACTATCTTTGAATAAAGCCGGCTTAGAAAGCCAGTTTTCTCCTATGCGGAACAGGCCATTGCCAGCCACACCGACCAGCTATCAAACTCCCCATCCAGTATACTATGCTCCGATCGAAGAACAAGAACCAGCCCCATCCCCGGTCCCTCCACAACACAACCCTCGGAACAGTATCAGCTCTCAGCTATCAACTCCAGGACCACAGGAGCCTATAAACAGAATGAGTTGGACTGCAAAGAACACTTCGACCCCTCAAACTGAACCAAGGAAAGCTTTGTTTAATGACGCACCAACAGACACCCCGAACCGAAAAGGAAAACCCGAGACCGGGTCTTTAAGACGACCTCCAGTTGACTCCAATAAGGACGAACTTAGATCACCCTCCAAGGAAGAAATTAAGAAGAACGAGGGTAACATATCCATGAACCAATCTGGAACCCTGGGCAGGAGCGGGAAGATCCCACCCAGACCTCCACCAAAGCCGAAAAAGAAGCTAAACCCCGAAGTAAACACGAGCGAGCCCTTATTCGAAGATGAAGGCGAAGACGGAACGGAAGTGTAG
Protein
MGDRTIRRIIILNILFVTITADFTNNCPEQCKCSWAGGDKQADCSHGHFDAIPKTLSSDIQKLNLTGNDVYEITIHAFHDVGLINLWKLTLSECKLQTIQRSGFFGLGIMIELDLSKNDLKSLHPDLFKETPKIRWILLNDNKIEKLDDGLFSNLAYLQKVDLSNNRIVHIGMKTFVNIPKLNFLRLDSNKLEYLKGDTLEGISSLSNLDVQDNPWRCDCYLQPFRNWVISKKLYTSNVYCADPPKVHGKTWKELDTNDFACRPSIVYPSTSTTLRSADNNITLACHVNGNPLPEVNWVLNAQIIDSTYRYEGEIKYYISQSKGENTEWVNLTITNVGTTDNGEYLCVAKNPGGVEERSVTLAVVQTPPGVIVPTGMNNNMMPVLIGVSCTAAIILIILVILCYCCCRRRTTDKKAENTNGEALIEGSVIPEMEKSLITAVNPVTKPPRRYDVPPSITSGTEMSELNKTLLDNDSVFAHNEDEKRSLGYDHLMKPSQDALNVEYGRTDGRAYPPDLLSFPPRAAQISPAASNASTVPDTTRLPPHQLNPVSPIHSPIYGITPNPNMFRTLPYSRSQSPFTAPITSPVVTPRQGYVTIPRRPRVPSWSSTASTQILPSSEAQEPLYDNLGLRTTADGSSVLSLNKAGLESQFSPMRNRPLPATPTSYQTPHPVYYAPIEEQEPAPSPVPPQHNPRNSISSQLSTPGPQEPINRMSWTAKNTSTPQTEPRKALFNDAPTDTPNRKGKPETGSLRRPPVDSNKDELRSPSKEEIKKNEGNISMNQSGTLGRSGKIPPRPPPKPKKKLNPEVNTSEPLFEDEGEDGTEV

Summary

EMBL
BABH01023022    BABH01023023    NWSH01000059    PCG80070.1    ODYU01002791    SOQ40727.1    + More
KQ459585    KPI98278.1    KQ460889    KPJ11042.1    JTDY01008586    KOB64498.1    RSAL01000117    RVE46807.1    AGBW02013469    OWR43370.1    KK852614    KDR20196.1    PYGN01000968    PSN38854.1    NEVH01025635    PNF15328.1    PNF15329.1    JTDY01003046    KOB70256.1    GBHO01007026    GBRD01008023    GBRD01004260    GDHC01013493    GDHC01010958    JAG36578.1    JAG57798.1    JAQ05136.1    JAQ07671.1    RSAL01000178    RVE44991.1    KQ414648    KOC66204.1    GEZM01060796    JAV70907.1    KPI98268.1    KQ971338    EFA01549.2    GALX01001885    JAB66581.1    AGBW02009832    OWR49788.1    KQ976712    KYM77004.1    ADTU01009563    GL441439    EFN64852.1    KQ981404    KYN41934.1    GL446901    EFN87122.1    LBMM01007429    KMQ89738.1    KQ978285    KYM95669.1    GL764458    EFZ17618.1    KZ288190    PBC34524.1    QOIP01000005    RLU22480.1    ACPB03005987    KK107214    EZA55253.1    LJIG01001087    KRT85853.1    KQ435066    KZC14383.1    GL888503    EGI59898.1    GECU01023800    JAS83906.1    GEBQ01022971    GEBQ01019247    JAT17006.1    JAT20730.1    KQ982093    KYQ60043.1    ABLF02033918    ABLF02033921    GFDF01010839    JAV03245.1    GFDF01010838    JAV03246.1    AJWK01033671    AJWK01033672    UFQT01004352    SSX35659.1    GFDL01014451    JAV20594.1    KQ460778    KPJ12427.1    GFDL01014445    JAV20600.1    DS231826    EDS28681.1    CH477915    EAT35082.1    KK854903    PTY19610.1    CVRI01000040    CRK94714.1    GGFK01004260    MBW37581.1    GGFK01004267    MBW37588.1    GGFK01004259    MBW37580.1    ADMH02001603    ETN61871.1    AAAB01008859    EAA07455.5    GGFJ01001778    MBW50919.1    APCN01000467    GGFJ01001653    MBW50794.1    JN006984    AEI26001.1    JXUM01099605    KQ564505    KXJ72172.1    AXCN02000046    CH379063    EAL32547.3    KRT06112.1    AXCM01001280    GGFM01002676    MBW23427.1    GFDF01006924    JAV07160.1    CM000162    EDX02143.1    CH954180    EDV46695.1    GBXI01006216    JAD08076.1    OUUW01000034    SPP89826.1    AY195738    AAO43730.1    AE014298    BT023770    AAF48953.2    AAN09488.1    AAN09489.1    AAZ41778.1    AFH07458.1    CCAG010013961    CCAG010013962    GDHF01026606    GDHF01012389    JAI25708.1    JAI39925.1    KA649967    AFP64596.1   
Pfam
PF13855   LRR_8        + More
PF07679   I-set
PF01463   LRRCT
PF00560   LRR_1
Interpro
IPR013783   Ig-like_fold        + More
IPR003599   Ig_sub       
IPR000483   Cys-rich_flank_reg_C       
IPR032675   LRR_dom_sf       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       
SUPFAM
SSF48726   SSF48726       
Gene 3D
PDB
1P8T     E-value=1.43778e-19,     Score=240

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.923035
 
 
Length:
825
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.35593
Exp number, first 60 AAs:
0.58405
Total prob of N-in:
0.06355
outside
1  -  383
TMhelix
384  -  406
inside
407  -  825
 
 

Population Genetic Test Statistics

Pi
240.866524
Theta
217.791258
Tajima's D
0.340327
CLR
0.246286
CSRT
0.470576471176441
Interpretation
Uncertain
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