SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08186
Pre Gene Modal
BGIBMGA009474
Annotation
PREDICTED:_prostatic_acid_phosphatase-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.744 PlasmaMembrane   Reliability : 1.377
 

Sequence

CDS
ATGGGCACAATCCTATCCGGCAACCGGGAGCTGTCTCCATTCCTGTCACTCTTCGAGAAGCTCTCGGGCTTACTAGGTTTCAACATCACCAAGAACCCCATGAGCCTTATGGGGCTTTACAACCTTATAGTGGCGCAGCGAGGCGTCGGACATAATTCAATACTGTCTGAAATACTTTCGCACCTCCCGCTGATCAAAGAAGTGTGTGATAAAATCATAAGTATAGTGTTTGGAGACACGAGATATTTACCATTGCAGTCAGGTGTCCTTCTCGATGGTTTCTTGACAGCGGCATCCCAGGTTCAGGCCGGTCAGAAGGTACCGAAAGTGTACCTGCATTCAGCTCACGACTTCAACGTGTACTCTATGATGGCCGTGACGAAGGTGAACACAACTGGCATGCCGAACTACGGAGCATCCTACTCGTTGGAACTGAGGAGGGAAAGGAGCACTCAAAAGTATTTCGTGTTGCCAGTCTTCATGAACGGACCAGGGGAGCCCGAGATCTATCTGACGAGTGAGGGCTGTGACGGACCGCTCTGTGAGTGGGAGAAGTTCCAGAGCATCATTTCATCGCACGCTCTCGACGTCACCAACTGGAGGAACAGCTGCGGCTGGAACGAGGACATCGACGTAGACAATTGTGCGGACTATTAA
Protein
MGTILSGNRELSPFLSLFEKLSGLLGFNITKNPMSLMGLYNLIVAQRGVGHNSILSEILSHLPLIKEVCDKIISIVFGDTRYLPLQSGVLLDGFLTAASQVQAGQKVPKVYLHSAHDFNVYSMMAVTKVNTTGMPNYGASYSLELRRERSTQKYFVLPVFMNGPGEPEIYLTSEGCDGPLCEWEKFQSIISSHALDVTNWRNSCGWNEDIDVDNCADY

Summary

Similarity
Belongs to the histidine acid phosphatase family.
EMBL
BABH01040368    NWSH01000059    PCG80075.1    RSAL01000117    RVE46811.1    AK401604    + More
BAM18226.1    KQ459585    KPI98276.1    ODYU01005909    SOQ47289.1    ODYU01008706    SOQ52512.1    ODYU01001511    SOQ37823.1    SOQ47287.1    PCG80073.1    PCG80074.1    SOQ37825.1    KQ460778    KPJ12419.1    GDQN01003058    JAT87996.1    AK404965    BAM20407.1    RSAL01000278    RVE43078.1    RSAL01000014    RVE53289.1    BABH01004863    NWSH01000024    PCG80629.1    AK401975    BAM18597.1    GAIX01014082    JAA78478.1    KQ459601    KPI93945.1    AGBW02010086    OWR49186.1    BABH01022999    BABH01023000    KQ460855    KPJ11936.1    ODYU01001406    SOQ37542.1    ODYU01008500    SOQ52158.1    KQ460889    KPJ11041.1    NNAY01005308    OXU16770.1    KPI98277.1    NWSH01001685    PCG70424.1    LSMT01000027    PFX32114.1    AGBW02013469    OWR43369.1    RCHS01002172    RMX49090.1    KQ435041    KZC14176.1    GBXI01011662    GBXI01007380    GBXI01001598    JAD02630.1    JAD06912.1    JAD12694.1    GGMR01005235    MBY17854.1    KQ414714    KOC62926.1    GFDL01015589    JAV19456.1    GFDL01015587    JAV19458.1    GFDL01015588    JAV19457.1    GFDL01015590    JAV19455.1    DS232876    EDS26304.1    UFQS01001870    UFQT01001870    SSX12606.1    SSX32049.1    GFXV01000178    MBW11983.1    EZ423150    ADD19426.1    PZQS01000005    PVD30980.1    CP012525    ALC44752.1    CCAG010002313    CCAG010002314    KQ982557    KYQ55099.1    OUUW01000002    SPP76591.1    PZQS01000002    PVD36224.1    GFJQ02003784    JAW03186.1    AGTO01011023    CM000159    EDW95328.2    GAKP01012457    GAKP01012456    GAKP01012455    JAC46495.1    GEZM01071380    GEZM01071376    GEZM01071375    GEZM01071372    JAV65849.1   
Pfam
PF00328   His_Phos_2        + More
PF18701   DUF5641
PF00665   rve
Interpro
IPR029033   His_PPase_superfam        + More
IPR029630   Api_m_3       
IPR000560   His_Pase_clade-2       
IPR033379   Acid_Pase_AS       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR036397   RNaseH_sf       
IPR040676   DUF5641       
SUPFAM
SSF53254   SSF53254        + More
SSF53098   SSF53098       
Gene 3D
PDB
4JOD     E-value=0.000438804,     Score=100

Ontologies

Topology

Length:
218
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.3195
Exp number, first 60 AAs:
0.2985
Total prob of N-in:
0.05737
outside
1  -  218
 
 

Population Genetic Test Statistics

Pi
372.578195
Theta
169.634806
Tajima's D
3.526876
CLR
1.193826
CSRT
0.994750262486876
Interpretation
Uncertain
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