SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08185
Pre Gene Modal
BGIBMGA009476
Annotation
PREDICTED:_carboxypeptidase_B-like_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 1.956
 

Sequence

CDS
ATGTTCTTATTTTATTGTTCGCTTGCGATTATCGCAGTGGTTTCTGCTAAAAATGAGGAGTATATGGGGTTCAGGGTTTACAACCTGACCTTTTCGACCCAGGAGCAGCAAGACAAGTTCCATCTGCTTAAAAGCGATTTGATTGAATTCTGGCAGCGACCAAATCTACAACGCAATGTGGTCGGTCAGGCCATGGTTCCGCCTTCTCATTTCCCATGGTTCGAAGAGCAACTCGAAAAATTGGGTATCGAAAGGAGTTTGCATGTAACTGACGTATTTGAATTTTTAAAAGAAAAGGATCCAACACCAATGTTAAGAAACAACAGAAATTTTGACTACACCGATTTTTATAGGTACAATGAAATCTTAAATCATCTAAACACCTTAAAAGAATCTTACGCAAACAATCCAAATATCAACGTAGACATTATACAACATGGAGTTACAGACCAGAATCGTCCATTAGTATATTTGAAGATATCCAGGGCCACCACCGCCATAAGACCGGTGGTGATAATAGAAGCTGGTATTATCCCTAATGAATGGATAACTATACCGGCAGTTCTGAATACAGTGGATAGAATATTGGAAGGGTCTGCCTATTTGGATGCATTTGATTGGATTGTCGTACCTGTTGTTAATCCTGATGGATATGAATATACTCATACCAATCTGAGACTCTGGTCGAAATCTCGAAGCACCAGAAGTAACCTTGGCATCATCTGCCCTGGGGTCAACATCAATCGCAATTTCGACTTGGACTGGTCACACTTCGACTCTAGCTCCAGTCCCTGCAGTCACCTTTATGCTGGAGTCGAACCCTTCTCAGAACCAGAAACCAAACTCTTGAAGCATTTAATAGACGAATATGGTACCAGAACTCGGTTGTACTTATCTCTTCAGAACAACGGAGGGTTCCTAACATATCCATGGCATTTTGAGAAGGCTGCTAGTGGGATGTTTAGGCAGCATCATCTAACTGGCATAGATGCTGTCAATGCTATGAACGAGAATTATATATTAGGAGCGGCTTCTGTTGTGTTTGGGGAAAGAGCTTCAGGCACTAGTGTAGATTATGTTAGATCTAACGGTTTACTTTATACTTTCAATATTGATATTGTACAAAGAGGAAACGGTGTTTTGATACCGGCAGGTGAAATTCGAAGTATTGTAGATGATGTTTGGAGAGGAATTTCTGCTATTGTTAACAGTATTATCTAA
Protein
MFLFYCSLAIIAVVSAKNEEYMGFRVYNLTFSTQEQQDKFHLLKSDLIEFWQRPNLQRNVVGQAMVPPSHFPWFEEQLEKLGIERSLHVTDVFEFLKEKDPTPMLRNNRNFDYTDFYRYNEILNHLNTLKESYANNPNINVDIIQHGVTDQNRPLVYLKISRATTAIRPVVIIEAGIIPNEWITIPAVLNTVDRILEGSAYLDAFDWIVVPVVNPDGYEYTHTNLRLWSKSRSTRSNLGIICPGVNINRNFDLDWSHFDSSSSPCSHLYAGVEPFSEPETKLLKHLIDEYGTRTRLYLSLQNNGGFLTYPWHFEKAASGMFRQHHLTGIDAVNAMNENYILGAASVVFGERASGTSVDYVRSNGLLYTFNIDIVQRGNGVLIPAGEIRSIVDDVWRGISAIVNSII

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01022996    KQ459585    KPI98274.1    KQ458448    KPJ05895.1    ODYU01007689    + More
SOQ50699.1    AGBW02009192    OWR51433.1    JTDY01005092    KOB67378.1    AY512677    AAS82586.1    AY512678    AAS82587.1    FJ210817    ACN69214.1    ODYU01005225    SOQ45875.1    AM085495    CAJ30028.1    NWSH01002977    PCG67157.1    EF600060    ABU98625.1    BABH01022994    BABH01022995    PCG67156.1    GFDG01000545    JAV18254.1    KQ460778    KPJ12423.1    JX865781    AGL42356.1    AY512675    AAS82584.1    KPJ12422.1    KPJ12424.1    KQ459595    KPI95994.1    KPI98273.1    KPI98272.1    KQ461189    KPJ07295.1    LJIJ01000118    ODN02272.1    OWR51431.1    FX985400    BAX07413.1    GBXI01006297    JAD07995.1    JRES01000080    KNC34299.1    GANO01000996    JAB58875.1    GDIQ01188456    JAK63269.1    GU325786    ADB96010.1    JX915874    AFZ78840.1    AJ626863    CAF25190.1    KPJ07296.1    GBRD01003706    JAG62115.1    AE014296    AY051552    AAF50560.2    AAK92976.1    SOQ50701.1    GALX01003006    JAB65460.1    RSAL01000278    RVE43076.1    AJ626862    CAF25189.2    GDIP01158897    JAJ64505.1    GDIQ01036867    JAN57870.1    NWSH01002042    PCG69323.1    CH480817    EDW50838.1    GDIP01059796    JAM43919.1    JXJN01026429    AGBW02007655    OWR54814.1    GDQN01002013    JAT89041.1    KPJ12425.1    LRGB01000084    KZS21059.1    GEDC01010757    JAS26541.1    GDIP01111928    JAL91786.1    GDIP01087990    JAM15725.1    GDIQ01193840    JAK57885.1    CCAG010004976    EZ422848    ADD19124.1    AGBW02010665    OWR48083.1    GL732529    EFX86827.1    CM000159    EDW93756.1    AY512674    AAS82583.1    GDIQ01085008    JAN09729.1    CH379069    EAL30738.1    GL764292    EFZ17948.1    CM000363    CM002912    EDX09570.1    KMY98094.1    AXCN02000557    CH963847    EDW73136.1    CH933809    EDW17770.1    GDIQ01188863    JAK62862.1    GL732574    EFX75560.1    GDQN01003319    JAT87735.1    EFX75600.1    GDIQ01179244    JAK72481.1    RSAL01000517    RVE41479.1    OWR51430.1    BT126625    AEE61588.1    LNIX01000001    OXA63011.1    BT127454    AEE62416.1    GGFJ01005675    MBW54816.1    GDIP01149218    JAJ74184.1    GGFJ01005621    MBW54762.1    BT128566    AEE63523.1    GDIP01009527    JAM94188.1    GDIP01198616    JAJ24786.1    KPI98270.1    SOQ45873.1    GL732547    EFX80529.1    GFDF01005234    JAV08850.1    GDIQ01033220    JAN61517.1    ACPB03022906    GAMC01014656    GAMC01014655    JAB91899.1   
Pfam
PF00246   Peptidase_M14        + More
PF02244   Propep_M14
PF00001   7tm_1
Interpro
IPR036990   M14A-like_propep        + More
IPR003146   M14A_act_pep       
IPR000834   Peptidase_M14       
IPR034223   IGCP-like_CPD       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
Gene 3D
PDB
2C1C     E-value=3.90087e-39,     Score=406

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.962828
 
 
Length:
406
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0871099999999999
Exp number, first 60 AAs:
0.07537
Total prob of N-in:
0.00545
outside
1  -  406
 
 

Population Genetic Test Statistics

Pi
249.368418
Theta
193.367104
Tajima's D
0.841905
CLR
0.000829
CSRT
0.612269386530673
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号