SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08184
Pre Gene Modal
BGIBMGA009487
Annotation
carboxypeptidase_B-like_precursor_[Bombyx_mori]
Location in the cell
Peroxisomal   Reliability : 1.091 PlasmaMembrane   Reliability : 1.535
 

Sequence

CDS
ATGAGGGCTTGGATTCTGTTGGGTCTCATTACGTTTGTGTTCGCCAAACATGAACATTATATTGGGTGGAAAACTTTCCACGTGAGACCATCAAACGATGTCCAACTCAAGACTTTCGGTTCGCTGATACAGCAACTGGACTTGGATGTGCTCGGTCATGCGACCACGCAGCGTGAAGGGTTGGTCCTCGTGCAGCCTGATCAGCTCGAAGCTTTCACGAGTCTAATGGATGGCCAGGGTATTGCCTACAGGATCCATGCTGATGACATCAAAAGTAAGCTTGATTACGACGACATGTTAATTGAAGAGGCACACAATGCAACCAAAGCTAGGAACGGAGCAAGACTGCCCTATGACAATTACCAGACCTGGGAAGCGATCGAAGCCTACCTTGACGACGTTGCTCGGCGATTCCCAAACAGAGCAACCCTGGTCAACGCCGGTCAATCTTTCGAGGGTCGAAATCTTAAATACCTAAAGATTTCCAGCACCAATTTCGAAGATAAATCGAAGCCGGTCATCGTCATCGACGGCGGTATCCACGCAAGAGAATGGATTTCCCCACCGACAGTCACCTGGGCCATTCGCAAGCTAGTGGAAGACGTGACAGAACCAGACCTTTTGGACCGGTTTGATTGGATCCTGTTTCCTGTTGTCAATCCTGATGGATATCGGTTCACATTTACCAACAATCGTTTCTGGCGCAAGACCCGATCGACTGATCAATCCGCTCTCGGCTCTATTTGCCCGGGGGTCGACGGTAACCGCAACTATGACTTCTTCTGGAATACTGTGGGTACGAGCAGCAACGCATGCGCAGACACGTTTGCCGGGCGCCGAGCCTTCTCCGAGGTCGAAGTAAGAGCTGTACGCGACATCCTGCACGAGCATCTGCCGCGCATCGCACTGTACCTGACCATGCATAGCTTCGGCAGCATGATCCTGTACCCTTGGGGCCACGATGGGTCTCTGTCGAACAACGCTCTAGGACTCCACACGGTCGGTATAGCGATGGCCGACGCGATCAACAGTAAAGCGTTAAGCCACTTCCCGCGTTACGTCGTCGGCAATTCCGTTCTGGTCATCGGATATGCTGCATCAGGAGCATCGGAAGACTACGCTCATTCAATTGGCGTTCCGTTTAGTTACACGTATGAGTTGCCCGGTCTGAATTCGGGCATGCAAGGTTTCGTCTTAGAACCGAGATACATTCAGCAAGTATGCGAGGAAACATGGCTTGGTATTGTAGCCGGTGCTAGAAGAGCTGGTGATATTTTCAGGAAGTAA
Protein
MRAWILLGLITFVFAKHEHYIGWKTFHVRPSNDVQLKTFGSLIQQLDLDVLGHATTQREGLVLVQPDQLEAFTSLMDGQGIAYRIHADDIKSKLDYDDMLIEEAHNATKARNGARLPYDNYQTWEAIEAYLDDVARRFPNRATLVNAGQSFEGRNLKYLKISSTNFEDKSKPVIVIDGGIHAREWISPPTVTWAIRKLVEDVTEPDLLDRFDWILFPVVNPDGYRFTFTNNRFWRKTRSTDQSALGSICPGVDGNRNYDFFWNTVGTSSNACADTFAGRRAFSEVEVRAVRDILHEHLPRIALYLTMHSFGSMILYPWGHDGSLSNNALGLHTVGIAMADAINSKALSHFPRYVVGNSVLVIGYAASGASEDYAHSIGVPFSYTYELPGLNSGMQGFVLEPRYIQQVCEETWLGIVAGARRAGDIFRK

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01022994    BABH01022995    JX865781    AGL42356.1    NWSH01002977    PCG67156.1    + More
AM085495    CAJ30028.1    PCG67157.1    FJ210817    ACN69214.1    EF600060    ABU98625.1    ODYU01005225    SOQ45875.1    JTDY01004612    KOB67948.1    RSAL01000278    RVE43076.1    AGBW02009192    OWR51430.1    SOQ45873.1    GDQN01002013    JAT89041.1    AY512677    AAS82586.1    AY512678    AAS82587.1    ODYU01003862    SOQ43155.1    OWR51431.1    KQ460778    KPJ12424.1    KQ459585    KPI98272.1    ODYU01003485    SOQ42347.1    GDQN01005910    JAT85144.1    GDQN01003319    JAT87735.1    KPI98273.1    AJ005177    CAA06418.1    GU323795    ADA83700.1    KPJ12423.1    KPJ12422.1    AJ005178    CAA06419.1    AY512674    AAS82583.1    GU325786    ADB96010.1    BABH01022992    AY512675    AAS82584.1    KPJ12425.1    AJ005176    CAA06417.1    EU924507    ACH82086.1    RVE43075.1    KQ459604    KPI92215.1    AJ626863    CAF25190.1    KPI98270.1    ODYU01007689    SOQ50698.1    OWR51432.1    RSAL01000517    RVE41479.1    KQ460045    KPJ18276.1    SOQ50701.1    BABH01022991    KQ461189    KPJ07295.1    JTDY01005092    KOB67379.1    GDQN01001497    JAT89557.1    BABH01024959    BABH01024960    AJ626862    CAF25189.2    KPJ07296.1    NWSH01002042    PCG69323.1    KPI98271.1    KQ459595    KPI95994.1    ODYU01000433    SOQ35191.1    ODYU01006127    SOQ47708.1    AY512676    AAS82585.1    AGBW02007655    OWR54814.1    AGBW02010665    OWR48083.1    GDHF01017649    JAI34665.1    JXJN01026429    CCAG010004976    EZ422848    ADD19124.1    GBXI01000083    JAD14209.1    ODYU01003089    SOQ41402.1    GAKP01022233    JAC36719.1    JRES01000080    KNC34299.1    CH933809    EDW17767.1    GAMC01014656    GAMC01014655    JAB91899.1    GBXI01011699    JAD02593.1    GFDG01001134    JAV17665.1    GFDG01001133    JAV17666.1    CM000159    EDW93755.1    CH940647    EDW68999.1    GBXI01014928    JAC99363.1    GBXI01006297    JAD07995.1    GL732537    EFX83248.1    OUUW01000002    SPP77182.1    CH379069    EAL30741.3    CH480817    EDW50836.1    KNC34344.1    GAKP01008006    JAC50946.1    CH954178    EDV50475.2    CM000363    CM002912    EDX09569.1    KMY98092.1    CH963847    EDW73134.1    CH916366    EDV97050.1   
Pfam
PF00246   Peptidase_M14        + More
PF02244   Propep_M14
PF00001   7tm_1
Interpro
IPR003146   M14A_act_pep        + More
IPR036990   M14A-like_propep       
IPR000834   Peptidase_M14       
IPR034223   IGCP-like_CPD       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
Gene 3D
PDB
2C1C     E-value=4.68848e-142,     Score=1293

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.927472
 
 
Length:
428
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.2736
Exp number, first 60 AAs:
0.14461
Total prob of N-in:
0.00969
outside
1  -  428
 
 

Population Genetic Test Statistics

Pi
4.559206
Theta
5.557484
Tajima's D
-0.80752
CLR
4.040011
CSRT
0.177591120443978
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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