SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08183
Pre Gene Modal
BGIBMGA009486
Annotation
carboxypeptidase_B-like_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.702
 

Sequence

CDS
ATGAATCATTTTTTGATCCTTTCCAGATATAAATCGTACTACATATCACCTTCACACGAGAATGAGTTCCAAGCACTCGCTTCCTTGGAGAATGAGTATCAAATTGATGTTTTGACCCGGCCGATATTCGGAAGGGACGGACTGGTTCTGGTTAAGCCGGAGTACCAGGAGAGCTTCTTGGATGCTCTCGATAAATACGGCATCAAGTACAGAATTCATTTTGACGATGTGAAAGCGCAACTTGACTACGAGGACGCCATCTTGGAATTGAGAAGGAACCAAACGAGAAGTACAGAGAGATTGTCATACACCAGCTACCATGATTGGCCAGTGATTGAAGAGTACATAGACGGCATTGCTCACCGCTATCCCGATTTAGTGAAATTGGTTAATGCAGGAAGGACTTTCGAAGGGCGGAACCTCAAGTACCTGAAAATTTCCACAACAAACTTCGAAGATGCGAGCAAACCTGTTATTGTAATAGACGCAGCCATCCACGCCAGAGAATGGGCTACGATCCCTGTAGCTACTTGGGCCATCCACAAGCTAGTTGAAGACGTGACTGAGCCTGATCTGTTGAATAATTTCGATTGGATCATTTTCCCTGTTGCCAATCCCGACGGATACACGTTCTCTTTGAATACGCAACGTTTCTGGCGCAAGACCAGATCAATCGTTTCCCCCAACACAGAAAGGTGTCCGGGAGTAGACGGCAATCGAAACTATGATTTCCATTGGAACACTGTTGGTACGAGTACTAACCCTTGCGCTGAGAACTACGGCGGACCAAAGGCCTTCTCCGAGATTGAAACTAGAATAGTCCGTGATATCTTGGATGAGCACTTGTCCCGAATCAGTCTATACCTTACTATTCACAGCCATGGCAGCATGATCTTGTACCCATGGGGACACGATGGCTCTTTATCCCACAACGCTCTTGGTCTTCACACCGTTGGTATTGAAATGGCAAATGCAATCCACACTAAGGCTTTAAGCTACTTCCCAAGATATGTCGTTGGAAACGCAGCTCTCGTTTTGAGGTACGCAGCATCCGGAGCTTCTGAAGACTACGCCCATTCAGTTGGGGTGCCGCTGTCATATACCTACGAGCTTCCAGGAGGCGGTAGAGGATTCTTCTTGGATCCAATTTATATTAAACAAGTGGCTACTGAAACTTGGGAAGGCATTGTAGCCGGTGCCAGAAAATCCGAAATTTTATTTAGAGCTTAA
Protein
MNHFLILSRYKSYYISPSHENEFQALASLENEYQIDVLTRPIFGRDGLVLVKPEYQESFLDALDKYGIKYRIHFDDVKAQLDYEDAILELRRNQTRSTERLSYTSYHDWPVIEEYIDGIAHRYPDLVKLVNAGRTFEGRNLKYLKISTTNFEDASKPVIVIDAAIHAREWATIPVATWAIHKLVEDVTEPDLLNNFDWIIFPVANPDGYTFSLNTQRFWRKTRSIVSPNTERCPGVDGNRNYDFHWNTVGTSTNPCAENYGGPKAFSEIETRIVRDILDEHLSRISLYLTIHSHGSMILYPWGHDGSLSHNALGLHTVGIEMANAIHTKALSYFPRYVVGNAALVLRYAASGASEDYAHSVGVPLSYTYELPGGGRGFFLDPIYIKQVATETWEGIVAGARKSEILFRA

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01022994    BABH01022995    JX865781    AGL42356.1    FJ210817    ACN69214.1    + More
NWSH01002977    PCG67157.1    PCG67156.1    ODYU01005225    SOQ45875.1    AM085495    CAJ30028.1    EF600060    ABU98625.1    AGBW02009192    OWR51430.1    JTDY01004612    KOB67948.1    RSAL01000278    RVE43076.1    SOQ45873.1    AY512677    AAS82586.1    AY512678    AAS82587.1    GDQN01002013    JAT89041.1    ODYU01003862    SOQ43155.1    KQ460778    KPJ12424.1    OWR51431.1    KQ459585    KPI98272.1    GDQN01003319    JAT87735.1    KQ459604    KPI92215.1    GU323795    ADA83700.1    ODYU01003485    SOQ42347.1    RSAL01000517    RVE41479.1    BABH01024959    BABH01024960    AJ005177    CAA06418.1    KPI98273.1    KQ460045    KPJ18276.1    AJ005178    CAA06419.1    BABH01022991    AJ005176    CAA06417.1    KPJ12422.1    KPJ12423.1    KQ461189    KPJ07295.1    BABH01022992    NWSH01002042    PCG69323.1    AY512674    AAS82583.1    GDQN01005910    JAT85144.1    KPJ12425.1    GU325786    ADB96010.1    AJ626862    CAF25189.2    GDQN01001497    JAT89557.1    ODYU01006127    SOQ47708.1    ODYU01007689    SOQ50698.1    AY512676    AAS82585.1    KPJ07296.1    ODYU01000433    SOQ35191.1    RVE43075.1    KQ459595    KPI95994.1    OWR51432.1    AJ626863    CAF25190.1    AY512675    AAS82584.1    KPI98270.1    AGBW02007655    OWR54814.1    JTDY01005092    KOB67379.1    AGBW02010665    OWR48083.1    SOQ50701.1    KPI98271.1    EU924507    ACH82086.1    JTDY01002459    KOB71372.1    ODYU01003089    SOQ41402.1    GEZM01092428    JAV56557.1    GDHF01017649    JAI34665.1    GFDG01000545    JAV18254.1    CCAG010004976    EZ422848    ADD19124.1    JRES01000080    KNC34299.1    JXJN01026429    GANO01000996    JAB58875.1    CH480817    EDW50838.1    GFDG01001145    JAV17654.1    GBXI01000083    JAD14209.1    CM000363    CM002912    EDX09570.1    KMY98094.1    AE014296    AY051552    AAF50560.2    AAK92976.1    CH916366    EDV97048.1    CH933809    EDW17770.1    CP012525    ALC43322.1    CH954178    EDV50474.1    CM000159    EDW93756.1    CH902618    EDV40704.1    GAKP01022233    JAC36719.1    AY752799    AAV84212.1    CH940647    EDW68999.1    EDV97049.1    GBXI01014928    JAC99363.1    GGFM01006222    MBW26973.1    CH963847    EDW73136.1    EDW73135.1    AY071045    AAF50561.2    AAL48667.1    GBXI01011699    JAD02593.1   
Pfam
PF02244   Propep_M14        + More
PF00246   Peptidase_M14
PF00001   7tm_1
Interpro
IPR034223   IGCP-like_CPD        + More
IPR000834   Peptidase_M14       
IPR036990   M14A-like_propep       
IPR003146   M14A_act_pep       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
Gene 3D
PDB
2C1C     E-value=9.64294e-118,     Score=1083

Ontologies

Topology

Length:
409
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02217
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00425
outside
1  -  409
 
 

Population Genetic Test Statistics

Pi
50.875966
Theta
141.111974
Tajima's D
-0.833376
CLR
298.017538
CSRT
0.169491525423729
Interpretation
Possibly Positive selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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