SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08181
Pre Gene Modal
BGIBMGA009478
Annotation
PREDICTED:_carboxypeptidase_B-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.735 PlasmaMembrane   Reliability : 2.035
 

Sequence

CDS
ATGAGAGGTTTCGGTTTGATTTTGTGTCTAATATTTAATTACGTATTTGCGAAGCACGAATTTTATGAAGGTCATGGCCTGTACCAAGTGGACGTGATTTTTGTGGAACAAACACAGTACCTCCAAGAATTACAATCCAAATATGCCATCGATGTTTGGATTAACGCACATCCAGGGAGGCAAGGGCAGATTCTCGTTCCTGATTACCTGAAAGAAAAGTTCGAAGAAGAACTTAAAGTTGCTGGAATTGGATACACATTACTAGTAGAAAATATCAAGGAGAAATTGGACTTGGAAGATTCTTTGTTAGAAGCTGCTGCAGCTAGAACCAATAGGTCCAAGTCTAGTCCTGGATTGTCGTTTGATGTTATCCACAGATATGACGTGGTTGATCAGTATCTAGTGGACTTGGCCAATAGCTACCCTGAAACCGTCACCGTTGTTTCGGCTGGGAAAAGCGTCGAAGGCAGGGATATCAAGTATCTAAAAATTTCCACAACAAATTTTCAGGACACTAGGAAACCAGTAGTGATGCTCCAATCTCTTCTTCACGCGAGAGAATGGGTGACCCTTCCAGGAACACTTTACGCTATTGAGAAACTGGTGATCGATGTAACTGAGAGCGACCTTCTCCAAGATATTGACTGGATCATCCTGCCCATTGCCAACCCTGACGGATACGAAATTTCTCATACAGAATTTCGATTCTGGCGCAAAAATCGCGCCCCTCACGCTTGTATGGGCGGCGTCGACCTTAATCGCAATTTCGACGTCTTCTGGGGAATATGGTCCAGCTCGAATCCTTGCGCCGAGGATTACCGTGGGCCGTATGCTTTCTCCGAACCAGAGACCGCGATAATCCGTGATATTCTACACGAATATAGAAACCGCTTGGAAGTCTACATTGATCTCCACAGTTTTGGCAGCATGATCTTATTTGGCTATGGTAACGGTCAGCTTGCGCCTAATGCACTGACGCTCAATTTCCTTGGAGTCCAGATGGCACAGGCCATTGATGCTGTCAAATGGCCCCAGAATAGAAATTACATTGTGGGTCATATTCCGTCAATCCTTTACAGGGCTTCTGGTGTGTCTAGCGACTACGCTACTAGTGTGGGTATACCATTAAGCTATACATATGAACTGCCATCCTACAGGGGTATTGTCGGCACATTACAAGGCTTTCTGGTGGAGCCTGAATTTATTGCTCAAGCTGGATTCGAGACATGGCAAGGTATCAAAGTGGCAGCTCGATTTGCTGTCAGGAATTTCAGAAGCCGTACTACTGAAAAGTAG
Protein
MRGFGLILCLIFNYVFAKHEFYEGHGLYQVDVIFVEQTQYLQELQSKYAIDVWINAHPGRQGQILVPDYLKEKFEEELKVAGIGYTLLVENIKEKLDLEDSLLEAAAARTNRSKSSPGLSFDVIHRYDVVDQYLVDLANSYPETVTVVSAGKSVEGRDIKYLKISTTNFQDTRKPVVMLQSLLHAREWVTLPGTLYAIEKLVIDVTESDLLQDIDWIILPIANPDGYEISHTEFRFWRKNRAPHACMGGVDLNRNFDVFWGIWSSSNPCAEDYRGPYAFSEPETAIIRDILHEYRNRLEVYIDLHSFGSMILFGYGNGQLAPNALTLNFLGVQMAQAIDAVKWPQNRNYIVGHIPSILYRASGVSSDYATSVGIPLSYTYELPSYRGIVGTLQGFLVEPEFIAQAGFETWQGIKVAARFAVRNFRSRTTEK

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01022991    BABH01022992    GDQN01005910    JAT85144.1    AY512674    AAS82583.1    + More
AJ005178    CAA06419.1    AJ005177    CAA06418.1    GU323795    ADA83700.1    GDQN01003319    JAT87735.1    RSAL01000278    RVE43075.1    KQ460778    KPJ12423.1    AJ626863    CAF25190.1    KPJ12425.1    KPJ12422.1    KQ459585    KPI98270.1    KPI98273.1    EU924507    ACH82086.1    JTDY01005092    KOB67379.1    AY512675    AAS82584.1    AJ005176    CAA06417.1    KPI98271.1    GU325786    ADB96010.1    ODYU01007689    SOQ50698.1    AGBW02009192    OWR51432.1    SOQ50701.1    RVE43076.1    FJ210817    ACN69214.1    ODYU01000433    SOQ35191.1    BABH01022994    NWSH01002977    PCG67157.1    ODYU01005225    SOQ45875.1    AM085495    CAJ30028.1    BABH01022995    EF600060    ABU98625.1    JX865781    AGL42356.1    PCG67156.1    ODYU01009870    SOQ54577.1    GDQN01001497    JAT89557.1    NWSH01002042    PCG69323.1    SOQ45873.1    KQ461189    KPJ07296.1    KQ459604    KPI92215.1    AJ626862    CAF25189.2    RSAL01000517    RVE41479.1    KQ459595    KPI95994.1    KPJ07295.1    BABH01024959    BABH01024960    KQ460045    KPJ18276.1    JTDY01004612    KOB67948.1    ODYU01003089    SOQ41402.1    AY512676    AAS82585.1    ODYU01006127    SOQ47708.1    OWR51430.1    AGBW02007655    OWR54814.1    BABH01022854    BABH01022855    BABH01022856    ODYU01003862    SOQ43155.1    AY512678    AAS82587.1    AGBW02010665    OWR48083.1    AY512677    AAS82586.1    GDQN01002013    JAT89041.1    OWR51431.1    KPJ12424.1    AE014296    AY051552    AAF50560.2    AAK92976.1    CH480817    EDW50838.1    CM000363    CM002912    EDX09570.1    KMY98094.1    GALX01003006    JAB65460.1    JRES01000080    KNC34299.1    CM000159    EDW93756.1    KPI98272.1    GFDG01001145    JAV17654.1    CH916366    EDV97048.1    BABH01022852    BABH01022853    GAMC01014656    GAMC01014655    JAB91899.1    GFDG01000545    JAV18254.1    CH902618    EDV40704.1    KQ971336    EFA01360.1    GBXI01006297    JAD07995.1    CH963847    EDW73136.1    CH954178    EDV50474.1    JXJN01026429    CH379069    EAL30738.1    GFDG01004011    JAV14788.1    OUUW01000002    SPP77183.1    CCAG010004976    EZ422848    ADD19124.1    GAKP01008006    JAC50946.1    AXCM01009926   
Pfam
PF00246   Peptidase_M14        + More
PF02244   Propep_M14
PF00001   7tm_1
Interpro
IPR000834   Peptidase_M14        + More
IPR034223   IGCP-like_CPD       
IPR003146   M14A_act_pep       
IPR036990   M14A-like_propep       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
Gene 3D
PDB
1JQG     E-value=9.71091e-138,     Score=1256

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.957611
 
 
Length:
431
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.44447
Exp number, first 60 AAs:
0.05605
Total prob of N-in:
0.00421
outside
1  -  431
 
 

Population Genetic Test Statistics

Pi
41.139824
Theta
178.075211
Tajima's D
-0.630641
CLR
146.866418
CSRT
0.213489325533723
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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