Gene

KWMTBOMO08180

Pre Gene Modal

BGIBMGA009485

Annotation

PREDICTED:_leucine-rich_repeat-containing_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr14(+):833902-855021      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.515

CDS

ATGGCTAATAAACATTGGGAGGCATGGTTGAAAATCATTTTCATACCCCTCTTTATTATTACGACCACTGCTGATTTCACCACGGAATGCCAGAGGCCATGCGACTGCAGGTGGCAGTCCGGAAACAAAGCAGCCATTTGCTCAAATTCAAGCCTTAAAGTCGTGCCTACGAATCTCAGCAACGACATACAAATACTAGAACTTTCTAACAACAACATACAACAATTACATTCGGAAGCTTTCAAGAAAGCTGGTCTCAACAACTTGAAAAAACTATTCCTGCGGGAGTGTAACTTGGAGATTGTCCACAAAACCACGTTCGTCACCCTGGCAATCATGATAGAGTTGGATCTGTCGAAGAATAAAATTCGATACCTCCATCCGGACACTTTCAAAGGCACCGAGAAACTGAGATTGATAAACTTAAGCAACAACTTTATCGATAAGTTGGAAGACGGTCTGTTTCGCAACATGAAGTTCCTGCAGAAAGTCGAAGCCAGCAATAACAGGATAGTTCGAATCGGCACAAAGGCATTCGTCAACTTACCTCAATTAAAGATTCTGAGGTTCGACGGCAACAATCTAAGCCACATGAAGCTCGAAACTTTAATAGCACTGAAGAATCTATCTGGCTTAGACTTGCATAACAATCCGTGGCGATGCGATTGCAATCTCCAGACTTTTAGGGACTGGGTGATCAGTCACAATTTGTACACGGCGCCTACATCCTGCGCGGAGCCGGTCTCCGTCCAAGGCAAACTTTGGAATGAATTAGATTCGTCGAATTTCGCGTGCCGCCCGACTATTCTCGAACCGTTACCAGACTCGACGGTCAAAAGTTACGATGAAAACGTGACTTTGACTTGTAAAGTTGTCGGTAATCCACCACCTGATGTCTCGTGGAGGTTTAATGGACGAGTTATTGAAATGAAAACGTTCGGCGAATTGAGATATGCGGTTAACGAAAACATTATGGATTTGATCAAATGGGTTAATTTGACAATTATTAACGCGCGATACAGCGACCGAGGGAATTATAGTTGCGTTGCCGAAAATCCAGGGGGACGTGACGAAAAGACATTAGGATTAGTTTTAACGAAATACGGAGGGTCTGGCTTAATAGCTGGCCTGGACACGGATTCATTTGCAATTATAATTGGCTGTTTGACGGCCATAGTAATAATATTTGGAGTGACGCTTGTAGTGTGCTACTTCACGACGCAGAATAATGAAATCAAAAGACTGATAAAGAACGACCCAAGATCGTCCAATGGGGAAGTTTTAATTGAAGGGTCGGTGAATTCGGATAACGAGAAGGGGATAAAAATGGATGTAAACCCCGTGACAAAACCGCCTAGAAAATACGATGTAACACCCTCGTTGACAAACGAAGCCACAGAGATGTCCGAATTGAATAAAACATTACTGGATAATGAAACAGCTTTGGCTACCTCCGAAGACAGCAGACGACATCAAGAGGCAGAGTTACCGAAGATTTCCCAAGAAACCTTAGTCGCAGACCGGTATTCACAAGACCAAACATATCCTCCTGATCTGCTTTCGTTTCCACTCAGAGCCCAACTCTCGTCAGCTGGAACGACAAAGCAAACTATTTGCAGTCCAATCAAATCTCCAGCTTACGCAGACTCAAGTGATTTGTACAGCAGATTTCAGTCACCAAATGTTCAGGGCTCGTTCAACCCAAAAGGCTACGTGACGTTACCAAGAAGGCCAAGGTTTCCTGAAGGTAACCCAAGACCCCAAGTCTTTTCAACTTTGAATGGAGTCATTCCTTATTACGACACTTTCAACATGAAACTCTTCCACGGTGGAAATTACTACAGCTTGAACAAGAGCGAAATGGACTTAGGGCCAATGACAAAAGTCCACTATAATGAAGAAGAAATCGAGCCTGCACCGTCTCCAGCGCCGGGAACTCCTCACGCAACAATCCCAAGAAGCAGCATCAGCTCTCCGAACATCCACAACCAGCTTCTGAATCTACAAGCCATGGCGAATTCAGATAACCGGCCTTTGAAGATGACTTTGGTGGAGAGCGAGAGTCTTCTGAAGAGTCCAAGGGATTTGAGGATAGCGTACAGTGGGAATGTAGTCAGCGGCACTCTGGGCAGAAGGACTGCTCCAAAACCACCCCCTAAACCGAGGAAAAAGAATTCATGTGAGGTCAAAGACCCTTTCTTAATGAACAACGATATAGCTACACAAGTGTAA

Protein

MANKHWEAWLKIIFIPLFIITTTADFTTECQRPCDCRWQSGNKAAICSNSSLKVVPTNLSNDIQILELSNNNIQQLHSEAFKKAGLNNLKKLFLRECNLEIVHKTTFVTLAIMIELDLSKNKIRYLHPDTFKGTEKLRLINLSNNFIDKLEDGLFRNMKFLQKVEASNNRIVRIGTKAFVNLPQLKILRFDGNNLSHMKLETLIALKNLSGLDLHNNPWRCDCNLQTFRDWVISHNLYTAPTSCAEPVSVQGKLWNELDSSNFACRPTILEPLPDSTVKSYDENVTLTCKVVGNPPPDVSWRFNGRVIEMKTFGELRYAVNENIMDLIKWVNLTIINARYSDRGNYSCVAENPGGRDEKTLGLVLTKYGGSGLIAGLDTDSFAIIIGCLTAIVIIFGVTLVVCYFTTQNNEIKRLIKNDPRSSNGEVLIEGSVNSDNEKGIKMDVNPVTKPPRKYDVTPSLTNEATEMSELNKTLLDNETALATSEDSRRHQEAELPKISQETLVADRYSQDQTYPPDLLSFPLRAQLSSAGTTKQTICSPIKSPAYADSSDLYSRFQSPNVQGSFNPKGYVTLPRRPRFPEGNPRPQVFSTLNGVIPYYDTFNMKLFHGGNYYSLNKSEMDLGPMTKVHYNEEEIEPAPSPAPGTPHATIPRSSISSPNIHNQLLNLQAMANSDNRPLKMTLVESESLLKSPRDLRIAYSGNVVSGTLGRRTAPKPPPKPRKKNSCEVKDPFLMNNDIATQV

Uniprot

H9JIY4   A0A0L7L4K0   A0A3S2P9A2   A0A194PZ03   A0A212F7T8   A0A0N1I6J6   + More
A0A2H1VIS2   A0A194PZ11   A0A0N0PBT6   A0A2A4K8R9   A0A3S2LY36   A0A0L7KMH4   A0A2P8Y3U2   A0A212EPE7   A0A067RKY8   A0A2J7PG70   A0A2J7PG77   A0A0A9YZR3   T1IA86   A0A0L7R5W1   A0A1B6IAD7   A0A1B6KZX6   H9JIY8   A0A088AMV5   A0A2A3ESN1   A0A2R7WKT4   A0A158N9E5   A0A151HZ90   A0A1Y1LIQ5   D2A1D0   E2AP20   J9K6Q2   A0A151JZI7   A0A336N249   A0A151I9B9   A0A151XI12   A0A0J7KH30   A0A026WH28   V5IA33   A0A3L8DPX1   A0A1L8DA57   A0A1L8D9U0   E9IP92   F4X0V6   A0A154PR84   A0A1B0CXF0   Q16L90   A0A0T6BFB4   Q29IV6   B4L6X5   B0W2D5   F8V246   A0A2M4A9Z8   A0A1W4X516   A0A2M4AAE4   A0A2M4AA18   A0A1Q3EZ72   A0A1Q3EZ76   Q86PM1   Q9VWI6   A0A3B0KVE3   B4NPJ3   W8AB76   B4PZI7   A0A0K8VMX1   B3NVN0   A0A0A1XAW8   W5JCS1   T1PMI7   A0A0P9CFK4   A0A1W4VSR6   B4JX28   B3MPT9   A0A1I8Q5I9   B4MA49   A0A2M3Z4H8   A0A0L0C480   A0A1I8NII2   A0A2M4BCZ2   A0A182MS41   A0A2M4BCM0   A0A182FR86   A0A1J1I4M3   A0A1A9ZWQ1   A0A1A9XS04   A0A1B0G494   A0A182J3Y3   A0A0M4ESM4   B4I748  

Pubmed

19121390    26227816    26354079    22118469    29403074    24845553    + More
25401762    26823975    21347285    28004739    18362917    19820115    20798317    24508170    30249741    21282665    21719571    17510324    15632085    17994087    23185243    18057021    21627820    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    17550304    25830018    20920257    23761445    26108605    25315136   

EMBL

BABH01022972    BABH01022973    JTDY01003046    KOB70256.1    RSAL01000178    RVE44991.1    + More
KQ459585    KPI98268.1    AGBW02009832    OWR49788.1    KQ460778    KPJ12427.1    ODYU01002791    SOQ40727.1    KPI98278.1    KQ460889    KPJ11042.1    NWSH01000059    PCG80070.1    RSAL01000117    RVE46807.1    JTDY01008586    KOB64498.1    PYGN01000968    PSN38854.1    AGBW02013469    OWR43370.1    KK852614    KDR20196.1    NEVH01025635    PNF15328.1    PNF15329.1    GBHO01007026    GBRD01008023    GBRD01004260    GDHC01013493    GDHC01010958    JAG36578.1    JAG57798.1    JAQ05136.1    JAQ07671.1    ACPB03005987    KQ414648    KOC66204.1    GECU01023800    JAS83906.1    GEBQ01022971    GEBQ01019247    JAT17006.1    JAT20730.1    BABH01023022    BABH01023023    KZ288190    PBC34524.1    KK854903    PTY19610.1    ADTU01009563    KQ976712    KYM77004.1    GEZM01060796    JAV70907.1    KQ971338    EFA01549.2    GL441439    EFN64852.1    ABLF02033918    ABLF02033921    KQ981404    KYN41934.1    UFQT01004352    SSX35659.1    KQ978285    KYM95669.1    KQ982093    KYQ60043.1    LBMM01007429    KMQ89738.1    KK107214    EZA55253.1    GALX01001885    JAB66581.1    QOIP01000005    RLU22480.1    GFDF01010839    JAV03245.1    GFDF01010838    JAV03246.1    GL764458    EFZ17618.1    GL888503    EGI59898.1    KQ435066    KZC14383.1    AJWK01033671    AJWK01033672    CH477915    EAT35082.1    LJIG01001087    KRT85853.1    CH379063    EAL32547.3    KRT06112.1    CH933812    EDW06121.2    KRG07153.1    DS231826    EDS28681.1    JN006984    AEI26001.1    GGFK01004260    MBW37581.1    GGFK01004267    MBW37588.1    GGFK01004259    MBW37580.1    GFDL01014451    JAV20594.1    GFDL01014445    JAV20600.1    AY195738    AAO43730.1    AE014298    BT023770    AAF48953.2    AAN09488.1    AAN09489.1    AAZ41778.1    AFH07458.1    OUUW01000034    SPP89826.1    CH964291    EDW86433.2    GAMC01021460    JAB85095.1    CM000162    EDX02143.1    GDHF01026606    GDHF01012389    JAI25708.1    JAI39925.1    CH954180    EDV46695.1    GBXI01006216    JAD08076.1    ADMH02001603    ETN61871.1    KA649967    AFP64596.1    CH902621    KPU81689.1    CH916376    EDV95304.1    EDV44701.1    KPU81690.1    KPU81691.1    KPU81692.1    KPU81693.1    CH940655    EDW66108.2    KRF82564.1    GGFM01002676    MBW23427.1    JRES01000940    KNC27037.1    GGFJ01001778    MBW50919.1    AXCM01001280    GGFJ01001653    MBW50794.1    CVRI01000040    CRK94714.1    CCAG010013961    CCAG010013962    CP012528    ALC49340.1    CH480823    EDW56146.1   

Proteomes

UP000005204    UP000037510    UP000283053    UP000053268    UP000007151    UP000053240    + More
UP000218220    UP000245037    UP000027135    UP000235965    UP000015103    UP000053825    UP000005203    UP000242457    UP000005205    UP000078540    UP000007266    UP000000311    UP000007819    UP000078541    UP000078542    UP000075809    UP000036403    UP000053097    UP000279307    UP000007755    UP000076502    UP000092461    UP000008820    UP000001819    UP000009192    UP000002320    UP000192223    UP000000803    UP000268350    UP000007798    UP000002282    UP000008711    UP000000673    UP000007801    UP000192221    UP000001070    UP000095300    UP000008792    UP000037069    UP000095301    UP000075883    UP000069272    UP000183832    UP000092445    UP000092443    UP000092444    UP000075880    UP000092553    UP000001292   

PRIDE

H9JIY4    H9JIY8    Q86PM1    Q9VWI6   

Pfam

PF13855   LRR_8        + More
PF07679   I-set
PF01463   LRRCT

Interpro

IPR001611   Leu-rich_rpt        + More
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR000483   Cys-rich_flank_reg_C       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR032675   LRR_dom_sf       
IPR013098   Ig_I-set       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10     3.80.10.10    

ProteinModelPortal

H9JIY4   A0A0L7L4K0   A0A3S2P9A2   A0A194PZ03   A0A212F7T8   A0A0N1I6J6   + More
A0A2H1VIS2   A0A194PZ11   A0A0N0PBT6   A0A2A4K8R9   A0A3S2LY36   A0A0L7KMH4   A0A2P8Y3U2   A0A212EPE7   A0A067RKY8   A0A2J7PG70   A0A2J7PG77   A0A0A9YZR3   T1IA86   A0A0L7R5W1   A0A1B6IAD7   A0A1B6KZX6   H9JIY8   A0A088AMV5   A0A2A3ESN1   A0A2R7WKT4   A0A158N9E5   A0A151HZ90   A0A1Y1LIQ5   D2A1D0   E2AP20   J9K6Q2   A0A151JZI7   A0A336N249   A0A151I9B9   A0A151XI12   A0A0J7KH30   A0A026WH28   V5IA33   A0A3L8DPX1   A0A1L8DA57   A0A1L8D9U0   E9IP92   F4X0V6   A0A154PR84   A0A1B0CXF0   Q16L90   A0A0T6BFB4   Q29IV6   B4L6X5   B0W2D5   F8V246   A0A2M4A9Z8   A0A1W4X516   A0A2M4AAE4   A0A2M4AA18   A0A1Q3EZ72   A0A1Q3EZ76   Q86PM1   Q9VWI6   A0A3B0KVE3   B4NPJ3   W8AB76   B4PZI7   A0A0K8VMX1   B3NVN0   A0A0A1XAW8   W5JCS1   T1PMI7   A0A0P9CFK4   A0A1W4VSR6   B4JX28   B3MPT9   A0A1I8Q5I9   B4MA49   A0A2M3Z4H8   A0A0L0C480   A0A1I8NII2   A0A2M4BCZ2   A0A182MS41   A0A2M4BCM0   A0A182FR86   A0A1J1I4M3   A0A1A9ZWQ1   A0A1A9XS04   A0A1B0G494   A0A182J3Y3   A0A0M4ESM4   B4I748  

PDB

2O6Q     E-value=2.06455e-18,     Score=229

KEGG

101739211    no KO assigned | (RefSeq) leucine-rich repeat-containing protein 4-like

GO

GO:0016021   GO:0005887   GO:0030510   GO:0005515   GO:0046983   GO:0003676   GO:0045454   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

SignalP

Position:   1 - 24,         Likelihood:  0.977651

 

 

Length:

743

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

31.11537

Exp number, first 60 AAs:

7.94387

Total prob of N-in:

0.40673

outside

1  -  382

TMhelix

383  -  405

inside

406  -  743

 

 

Pi

266.26402

Theta

193.787462

Tajima's D

1.079682

CLR

0.260437

CSRT

0.678366081695915

Interpretation

Uncertain