Silkworm Genome Informatics Database

Gene

KWMTBOMO08179

Pre Gene Modal

BGIBMGA009481

Annotation

PREDICTED:_uncharacterized_protein_LOC106719359_[Papilio_machaon]

Location

Bomo_Chr14(-):543331-549339 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.183

CDS

ATGCCTCGAAAACCTTGTTACTGGACGCGTAAACTAGAATTACAATTGATTGATTTCGTGCATCAAAGAGACTTCGTATGGAAACCAGTAGGAAATACTAACCACGATATTCAGAAAAAGTATAGGGCTTATGCGGAGTTCGCCGCTAAATTGGGTCGAGGATTTACAGCACGATCTGTAAGAGACAGGTGGGTGAACATAAGAAGCACATTCAATCACAACTTGCGTCGAGTAGAAAAATCTATGAAAGTAGCTAAATCGTCAGCAGAAATCTATGTTCCATGCTGGCCATTGTGGAAACCTCTACAATTCTTGAAGGAGATATCCAAGAAAGAACCCAACAATATAGAGAACTTTACTACTGCAGAAAATTATAGTGAGGAAATTAATGATGCCATTAAAAGAGAATGCGCTGTGAATAATGATCTGGAAATTAAAATTCGACAACGAAGTCAAAGAAGTGATAGACCTAGGAGAAAGAAAGTGAAAACTCTTAATAAGAATGGTAGTAAATGTATGAGGATAATTGATGATCTTGTGAAAGCTGTGAATCCTCTTGCAAATGCTGTAGGGAAGACAGAAGATGAAAGATATTGGTTTTTCGGTAAACACGTTACAGAACAACTCAACACTATGAGGACAAATGATGCAGAATGTGCTTGTCAAGAGATAATGACATTATTGGACGAGTGGCCATTGTGTGATGATCCTTAA

Protein

MPRKPCYWTRKLELQLIDFVHQRDFVWKPVGNTNHDIQKKYRAYAEFAAKLGRGFTARSVRDRWVNIRSTFNHNLRRVEKSMKVAKSSAEIYVPCWPLWKPLQFLKEISKKEPNNIENFTTAENYSEEINDAIKRECAVNNDLEIKIRQRSQRSDRPRRKKVKTLNKNGSKCMRIIDDLVKAVNPLANAVGKTEDERYWFFGKHVTEQLNTMRTNDAECACQEIMTLLDEWPLCDDP

Uniprot

H9JIY0 A0A2H1VLL5 A0A3S2P361 A0A2A4IYU3 A0A0N1PGH6 A0A194PY58 + More
A0A212EP96 A0A0L7KSM2 S4PMN9 H9JIU4 A0A2W1BXK1 A0A2H1VAV6 A0A2A4K6U6 A0A212FL51 A0A0N1IEW0 A0A3S2LNU4

Pubmed

19121390 26354079 22118469 26227816 23622113 28756777 + More

EMBL

BABH01022950 ODYU01002971 SOQ41144.1 RSAL01000037 RVE51185.1 NWSH01005257 + More
PCG64332.1 KQ461193 KPJ07018.1 KQ459585 KPI98267.1 AGBW02013507 OWR43320.1 JTDY01006403 KOB66039.1 GAIX01000076 JAA92484.1 BABH01023177 KZ149927 PZC77540.1 ODYU01001573 SOQ37983.1 NWSH01000071 PCG79961.1 AGBW02007925 OWR54419.1 KQ460426 KPJ14775.1 RSAL01000718 RVE41192.1

Proteomes

UP000005204 UP000283053 UP000218220 UP000053240 UP000053268 UP000007151 + More
UP000037510

PRIDE

H9JIY0 H9JIU4

Pfam

PF10545 MADF_DNA_bdg

Interpro

IPR006578 MADF-dom + More
IPR039353 TF_Adf1

ProteinModelPortal

H9JIY0 A0A2H1VLL5 A0A3S2P361 A0A2A4IYU3 A0A0N1PGH6 A0A194PY58 + More
A0A212EP96 A0A0L7KSM2 S4PMN9 H9JIU4 A0A2W1BXK1 A0A2H1VAV6 A0A2A4K6U6 A0A212FL51 A0A0N1IEW0 A0A3S2LNU4

KEGG

101744637 no KO assigned | (RefSeq) uncharacterized LOC101744637

GO

PANTHER

PTHR12243

Length:

237

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0009

Exp number, first 60 AAs:

0.00033

Total prob of N-in:

0.19510

outside

1 - 237

Pi

47.421119

Theta

165.829494

Tajima's D

-1.821406

CLR

3603.905865

CSRT

0.0279486025698715

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics