Gene

KWMTBOMO08171

Annotation

PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]

Location

Bomo_Chr14(+):428340-431555      View in EpiBrowser

Transcription factor

zf-BED

Location in the cell

Nuclear   Reliability : 2.942

CDS

ATGGGACCTAAGAAAAAAAGTTCCGTTTGGCAGTTCTTTAACAAAATTGACGATAAGAAAACGAAATGCAAACTATGTCAAAAGGAAATTAAGTCTGCTGGAAACACTACGAACTTAATTGGACATATTCGTAATGTTCATAAGGCTGCTTATCTCGAAATTCAGCCGAAACAAACTACATTCAATGCAGTAACTACTACAGACGAAATATCGAATCCTCTGGATCTGGATACCAAAGTTACGCCTTATAATAAAATGGATGATGGAGTACTTCAGTTTCAACCTGTTCCAAGTTGCAGTGGCAGTCAAAGATCCGGTGCACCGTTACCAAAAACCGTAAATGAAACCATTGATTCAGACTTAGACGAAAACGTTACACCTTTAAAACGCCAAAGAACAATACAGGCCGCTTTTAAAGATATTTCCTCTTACTCAGAATCTGGAGCGAAGACAAGGAAACTGAACAACTGTTTGTTATTCATGATTTGCAAAGACCATCAGCCATTCTCAATCGTTGAAAACGAAGGCTTCAAAACTCTAATGAAAACAGTTGCTCCTCAATATAAGCTCCCGAGTAGAACAACTCTAAGACGCTGGCTGGACGATAAATATGAAGTAATTTCAGAAACAATTAAGAAAATGTTGTCCTCTATAGAAGATATAACCCTAACAACAGATATTTGGTCGGATACCTTGAATATGAAAAGTTTTTTGGGCATCACAGCACATTTCGGAATAGACATTGAACTATATTCAGTCACCTTAGGTGTGTACGAATTGGATGAAAGACATACATCAGATTATCTTTCTGAAATTCTCTTAAAGGTATGTCAAGACTGGAAAATCGATCAAGAGAATGTAACAGCTGTTGTTACTGACAACGCAGCCAATATAGTTAAGGCGATCGAATTAGCGTTTGGTAGAAGGAAACACATCCCATGTTTTGCCCATACTCTGAATTTGGTGGCTGAAGGCACAATGATATGTATTGAGTGGAGAAACATTGTTTCTAAAGTAAAATCAATAGTGACTTGGTTTAAACAGAGTTGCATTGCTAGTGATGAATTACGTAAAGCTACTGCTGCGGCTACGGAGTCTTCTGCTGGAGCAGCTGAGGTAAAATTAATACAAAGCGTGGATACTCGCTGGAACAGTACATATTATATGTTACAAAGATTTCTAGAACTCCGTAGTGTCATAAATGATATTCTCTTCCGCCACCCTAGAGCACCTGCAATGCTGAGTGCATCGGAAATATCTACTGTATCGTCTGTCATCATGGTATTGCGACCCTTAGAAGCGGCTACAAAAGAAATTTCAGGTGATAAATACTGCACAAGTAGTAAAATTATTCCCTTAGTTCGTTGCATGCTCTCTAAAATAACTTCAGCTGTTATAGAAGATCCCGTAGCGAAAGAGGTGCAGAAACTTGCTATTAATGAAATAAATAAAAGAATGGGTTCAATAGAACATGTGAATGCTCTGGCTATCGCAAGTATTTTAGATCCACGGTTTAAAAGAATGCATTTCAATGATCCGATAGCTTGTTCGAATGCTGTTACGAAAATTAAAGATTTAATGAAGAAGAATTTGCATAGCAATGAAGAACCTGAGTCCGATTCTGACAAGTCCGATAAAAATGAAGAGGCCTTTTCATTATGGACTGATCACCATAAGTTAGTGCATCGTAACTGGAAAATTAACAAATCTGAAGACGTTTTGTCTGACGAACTTTCCGTTTATCTCCGAACTCCTGTTGGAAGACTTAAAGAAAATCCGTTAGAAATTTGGTGA

Protein

MGPKKKSSVWQFFNKIDDKKTKCKLCQKEIKSAGNTTNLIGHIRNVHKAAYLEIQPKQTTFNAVTTTDEISNPLDLDTKVTPYNKMDDGVLQFQPVPSCSGSQRSGAPLPKTVNETIDSDLDENVTPLKRQRTIQAAFKDISSYSESGAKTRKLNNCLLFMICKDHQPFSIVENEGFKTLMKTVAPQYKLPSRTTLRRWLDDKYEVISETIKKMLSSIEDITLTTDIWSDTLNMKSFLGITAHFGIDIELYSVTLGVYELDERHTSDYLSEILLKVCQDWKIDQENVTAVVTDNAANIVKAIELAFGRRKHIPCFAHTLNLVAEGTMICIEWRNIVSKVKSIVTWFKQSCIASDELRKATAAATESSAGAAEVKLIQSVDTRWNSTYYMLQRFLELRSVINDILFRHPRAPAMLSASEISTVSSVIMVLRPLEAATKEISGDKYCTSSKIIPLVRCMLSKITSAVIEDPVAKEVQKLAINEINKRMGSIEHVNALAIASILDPRFKRMHFNDPIACSNAVTKIKDLMKKNLHSNEEPESDSDKSDKNEEAFSLWTDHHKLVHRNWKINKSEDVLSDELSVYLRTPVGRLKENPLEIW

Uniprot

J9LDY8   A0A1W4WLZ1   J9L2Y9   J9M7K2   A0A1E1WN08   J9KF88   + More
J9M2M5   A0A151IJ50   E2AN53   J9M5N4   J9KNP5   A0A151J3A2   A0A151ICL6   A0A0J7K4Y0   J9LFC3   E2C2R7   A0A195DX32   A0A151K1W2   A0A151J8J8   A0A026X0S0   X1WXE1   A0A151IVN1   A0A3L8DVM9   A0A2S2QDH1   A0A026WKR9   A0A2S2R3S9   J9LSA5   A0A0J7KSL2   A0A151IK53   A0A026VWT7   A0A437AZ90   A0A224XKI7   Q8T648   J9LEV9   A0A158P559   A0A3P8RVY2   X1X7U1   T1JXM7   J9LVM0   A0A3B1JDP8   A0A2S2QCJ4   E2A4Y2   A0A232EFR6   J9LS52   A0A1X7UCW0   A0A3B3BJP2   J9KBT0   X1WTG7   G3PR68   J9KJS4   A0A1X7TGY6   A0A1W4XFU6   X1XCD4   A0A3Q3GI05   T1K5U2   A0A1X7UJA9   A0A0A1XSV1   A0A2S2PB02   A0A0K2UYR9   A0A1X7UFA9   A0A2A4JMY2   J9KDG5   A0A2A4JLR2   A0A151IU19   X1XTH2   A0A034W0I4  

Pubmed

20798317    24508170    30249741    12733661    25329095    28648823    + More
29451363    25830018    25348373   

EMBL

ABLF02010709    ABLF02009488    ABLF02008875    GDQN01002674    JAT88380.1    ABLF02030582    + More
ABLF02006015    KQ977395    KYN02984.1    GL441080    EFN65135.1    ABLF02001734    ABLF02023260    KQ980290    KYN16919.1    KQ978037    KYM97822.1    LBMM01014067    KMQ85349.1    ABLF02011645    ABLF02044591    ABLF02050984    ABLF02055777    GL452203    EFN77752.1    KQ980204    KYN17277.1    LKEX01009590    KYN50115.1    KQ979507    KYN21183.1    KK107050    EZA61658.1    ABLF02026056    ABLF02057203    KQ980913    KYN11465.1    QOIP01000003    RLU24471.1    GGMS01006357    MBY75560.1    KK107161    EZA56605.1    GGMS01015207    MBY84410.1    ABLF02017802    LBMM01003701    KMQ93224.1    KQ977255    KYN04655.1    KK107725    EZA47986.1    RSAL01000257    RVE43413.1    GFTR01007466    JAW08960.1    AF486809    AAL93203.1    ABLF02018406    CAEY01000199    ABLF02012532    CAEY01000832    ABLF02006624    ABLF02006626    GGMS01006230    MBY75433.1    GL436768    EFN71507.1    NNAY01004948    OXU17200.1    ABLF02021118    ABLF02014501    ABLF02011646    ABLF02013863    ABLF02067360    CAEY01001590    GBXI01000181    JAD14111.1    GGMR01013943    MBY26562.1    HACA01026053    CDW43414.1    NWSH01001073    PCG72760.1    ABLF02055338    PCG72759.1    KQ980971    KYN10910.1    ABLF02011642    GAKP01011699    JAC47253.1   

Proteomes

UP000007819    UP000192223    UP000078542    UP000000311    UP000078492    UP000036403    + More
UP000008237    UP000053097    UP000279307    UP000283053    UP000015104    UP000265080    UP000018467    UP000215335    UP000007879    UP000261560    UP000007635    UP000261660    UP000218220   

Pfam

PF05699   Dimer_Tnp_hAT        + More
PF04937   DUF659
PF02892   zf-BED
PF13843   DDE_Tnp_1_7

Interpro

IPR037220   BED_dom        + More
IPR012337   RNaseH-like_sf       
IPR008906   HATC_C_dom       
IPR007021   DUF659       
IPR036236   Znf_C2H2_sf       
IPR003656   Znf_BED       
IPR029526   PGBD       

SUPFAM

SSF140996   SSF140996        + More
SSF53098   SSF53098       
SSF57667   SSF57667       

ProteinModelPortal

J9LDY8   A0A1W4WLZ1   J9L2Y9   J9M7K2   A0A1E1WN08   J9KF88   + More
J9M2M5   A0A151IJ50   E2AN53   J9M5N4   J9KNP5   A0A151J3A2   A0A151ICL6   A0A0J7K4Y0   J9LFC3   E2C2R7   A0A195DX32   A0A151K1W2   A0A151J8J8   A0A026X0S0   X1WXE1   A0A151IVN1   A0A3L8DVM9   A0A2S2QDH1   A0A026WKR9   A0A2S2R3S9   J9LSA5   A0A0J7KSL2   A0A151IK53   A0A026VWT7   A0A437AZ90   A0A224XKI7   Q8T648   J9LEV9   A0A158P559   A0A3P8RVY2   X1X7U1   T1JXM7   J9LVM0   A0A3B1JDP8   A0A2S2QCJ4   E2A4Y2   A0A232EFR6   J9LS52   A0A1X7UCW0   A0A3B3BJP2   J9KBT0   X1WTG7   G3PR68   J9KJS4   A0A1X7TGY6   A0A1W4XFU6   X1XCD4   A0A3Q3GI05   T1K5U2   A0A1X7UJA9   A0A0A1XSV1   A0A2S2PB02   A0A0K2UYR9   A0A1X7UFA9   A0A2A4JMY2   J9KDG5   A0A2A4JLR2   A0A151IU19   X1XTH2   A0A034W0I4  

PDB

6DX0     E-value=4.18294e-14,     Score=191

KEGG

105842192    no KO assigned | (RefSeq) uncharacterized LOC105842192

GO

GO:0046983   GO:0003677   GO:0016021   GO:0003676   GO:0050660   GO:0045454   GO:0005515   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

597

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02103

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00168

outside

1  -  597

 

 

Pi

215.500937

Theta

212.011977

Tajima's D

0.040815

CLR

0.000861

CSRT

0.383380830958452

Interpretation

Uncertain