Gene

KWMTBOMO08170

Pre Gene Modal

BGIBMGA014460

Annotation

Uncharacterized_protein_OBRU01_22018_[Operophtera_brumata]

Location

Bomo_Chr14(-):411860-412969      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.612

CDS

ATGACCAAAGGGATGCTGATGTATTACACAACAGCAATGCTATGGGCACGCCTGTTAGATATCAAGGCTAAGCGCGGCAACGCAAACTTAACCTTTGAAGAACTCGAGTTTTGCAAAGCGATTATGCAACACGAGTATAATGTTCCACAACCCATCTATCTGTTTCTAAAAGGAATAGGTGAAGTAAAAGACGTGACGGGTAAAACCATACGTCTCACTGATCATGTTCTACCAGTAACAGTGGTACAGGGAATGGGAGGTTATCACTCTGCAGCAATAGACGCCGCAACTCACAACCTCTACGAAGAGATACCAACCTTAGGTATCTGTGGAGATATAGTGATGGCAGAATCATCGGATGCAACTGCTCCCGCAGCCAATTTCCGTGTGACACCACCACGAACCAGAGCGACCCGCGCATTGTGTGGGAACTTTGGACCGATCGGAGCAAGGAAGGAGGAGGTTCGCATACTGCTGAATTCAGTTGGTGTGACCGCAACCACTTTCGACGAAGTGATCGGAGGAACGAGGCTGAACATCCACCTCATTCAGAAAATCAGCGACTATTTCACAGGATCACCAACATTCCGCAACGAAAAAGTCAAACTAGACGCTCTGACTGTAGAAGGAGACGCAGCACAACTCATCAAGTCGATTCCGACAGATGAGAACAACGACGCAAGCGCACGTTGGACAAACTTGGTCATCAGACCAAAGTCCGCAAACGCAAATTCAACGTCAACCTTTGGTGCCTCATACCTTATGGGATACCAATTACATAAAACTGCAATCGCCGACAGCGACGCCAATTGGTGTTGCGTCGAGCAAATAGCAGAAACCAATCCATGGGCGATACCACCTGAATGGATTGCAAACAAGAACGAGAGAAGAGCCCTCCCTCCAGGAATGGAGATAGAGAGGTTCGCATCCATCTCGGACTCTCAGCGAAACAGGACAAACGCCATAGTAAGGCGAATGATTATCAGTCCTCGTTGA

Protein

MTKGMLMYYTTAMLWARLLDIKAKRGNANLTFEELEFCKAIMQHEYNVPQPIYLFLKGIGEVKDVTGKTIRLTDHVLPVTVVQGMGGYHSAAIDAATHNLYEEIPTLGICGDIVMAESSDATAPAANFRVTPPRTRATRALCGNFGPIGARKEEVRILLNSVGVTATTFDEVIGGTRLNIHLIQKISDYFTGSPTFRNEKVKLDALTVEGDAAQLIKSIPTDENNDASARWTNLVIRPKSANANSTSTFGASYLMGYQLHKTAIADSDANWCCVEQIAETNPWAIPPEWIANKNERRALPPGMEIERFASISDSQRNRTNAIVRRMIISPR

Uniprot

H9JY42   A0A0L7KPE7   A0A0L7KT16   A0A034VRH7   A0A0C9QW42   A0A1L3KP50   + More
A0A1L3KL85   A0A1B6DIM7   A0A2J7R5Z3   A0A2J7Q5P2   A0A1L3KLY0   A0A1L3KLX2   A0A1L3KLC3   J9LDZ5   A0A2S2NZP7   A0A2S2QM75   A0A0R3TX96   A0A0A9Z345   Q6F3I8   A0A158ND08   A0A1Y1K5J2   A0A151ICD9   A0A195BQA3   A0A195EYI1   A0A151WKH2   F4W9V4   A0A1L3KL92   A0A1L3KLB9  

Pubmed

19121390    26227816    25348373    27880757    25401762    21347285    + More
28004739    21719571   

EMBL

BABH01042137    JTDY01007770    KOB64951.1    JTDY01006214    KOB66191.1    GAKP01014522    + More
JAC44430.1    GBYB01004882    JAG74649.1    KX884603    KX884680    APG79082.1    APG79160.1    KX884047    KX884122    KX884174    APG78157.1    APG78235.1    APG78289.1    GEDC01011744    JAS25554.1    NEVH01006986    PNF36255.1    NEVH01017553    PNF23901.1    KX884210    KX884245    APG78325.1    APG78360.1    KX884204    APG78319.1    KX884095    APG78208.1    ABLF02035778    GGMR01009985    MBY22604.1    GGMS01009663    MBY78866.1    UZAE01014344    VDO13206.1    GBHO01004715    JAG38889.1    AB183424    BAD27579.1    ADTU01000871    GEZM01092003    JAV56683.1    KQ978060    KYM97721.1    KQ976423    KYM88768.1    KQ981909    KYN33191.1    KQ983012    KYQ48358.1    GL888033    EGI69090.1    KX884068    APG78178.1    KX884084    APG78197.1   

Proteomes

UP000005204    UP000037510    UP000203799    UP000235965    UP000202428    UP000202844    + More
UP000007819    UP000046398    UP000278807    UP000005205    UP000078542    UP000078540    UP000078541    UP000075809    UP000007755    UP000202301    UP000203875   

PRIDE

H9JY42   

Pfam

PF17921   Integrase_H2C2

Interpro

IPR001584   Integrase_cat-core        + More
IPR012337   RNaseH-like_sf       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       

SUPFAM

SSF53098   SSF53098       

Gene 3D

3.30.420.10    

ProteinModelPortal

H9JY42   A0A0L7KPE7   A0A0L7KT16   A0A034VRH7   A0A0C9QW42   A0A1L3KP50   + More
A0A1L3KL85   A0A1B6DIM7   A0A2J7R5Z3   A0A2J7Q5P2   A0A1L3KLY0   A0A1L3KLX2   A0A1L3KLC3   J9LDZ5   A0A2S2NZP7   A0A2S2QM75   A0A0R3TX96   A0A0A9Z345   Q6F3I8   A0A158ND08   A0A1Y1K5J2   A0A151ICD9   A0A195BQA3   A0A195EYI1   A0A151WKH2   F4W9V4   A0A1L3KL92   A0A1L3KLB9  

KEGG

NA   

GO

GO:0015074   GO:0003676  

Length:

331

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06818

Exp number, first 60 AAs:

0.04084

Total prob of N-in:

0.05260

outside

1  -  331

 

 

Pi

167.082544

Theta

169.811289

Tajima's D

-0.248136

CLR

458.672842

CSRT

0.307184640767962

Interpretation

Possibly Positive selection