Silkworm Genome Informatics Database

Gene

KWMTBOMO08169

Pre Gene Modal

BGIBMGA014462

Annotation

PREDICTED:_uncharacterized_protein_LOC105380875_[Plutella_xylostella]

Location

Bomo_Chr14(-):369708-371879 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.2

CDS

ATGAGCGACCGTGAATATAACGAGTCTCCGATATCAGAAGTGGGATCTCGACAGGCTGAGAAACCGCTAAATCATGAAGAATTATGGCGACAACTTATTGAAAAACAGAACCAAAATATGATGGCGCTGATCTCTACGCTACGACCGCATGAATCAAGCCGTCACTTCACTCTACCGGAATTCAACCCTGATAAAGAAGAAAGTGACGCAAGATCTTGGTGTGCAACAGCGGATATTTGTTTCGAAGACAACCCACCACGTGGCGGTCAACTCATTGTTGTCATTAGCAAGGCTCTGAAAGGTACCGCATCATCATGGTTGTCACAGATATCATACCCTGGGATATCGTGGCCGGAATTTAAGGACCTATTCACTGCAAGATTCATATCTAAAGACACATGTGCAGGTACCCTCATTAACTTACATAGTGAAAAATTAAAAGACAACGAGTCGTTAGCTGCATGCGCGAGTCGAATTATTACCTCATTGATGAGCCGTTGGAAAGATTGCACCGAAGAACAGATCGCCGTAGCAACCGCCCTAGCGCACATTTCTCAACACGACTCACGATTACAACGTCTTGCTTTTACAACGGAAATTACTTCCCGCCAGCAACTACAAAAAGAATTGCAGGCTTTCTCGTATCAAAAGCGAAAAGCTCCTGCAGCAGAGGCGTTGTCAACAGCTGATAGCAAGCGAGAAAAATTTTACAAGCAGCCTACATTAAAGTGTTTTGGCTGTGGGAAATTGGGTCACCGGCAGGCTGAGTGTAGATCAAAGCCCAAAAACTATAAGCCAAAATCTCTTGTGAATACTGACGTGGCTTCCACTTCTCATCGTGTAGAAAAATCAACGACCATTAGATGTTTCAAGTGTGGAGTATTGGGACATGTGGCAAGCCACTGTACTGCAGGAACTGGCTCCCGCGGTGGCAACACCAGCGCTAGTACATCGGCCGAGCGTCGTGTCGACCTGTGCGTAGTAGAACCTCCTACTGGATACCTTCAACATCGCGATACTTCAGAGACTATTCCTATTTTCAACTGGAAAAACAACTCATACGCTCCTCACACATTCAATGAAAGTGAATATGAATTTGGGCGCGTAAATACATTATCTGACCGGCATGGCATGTTGTTGCCAATGGACATTTTCATGGAGGTGACACAAATGGATCAGTTAGTGTCTAATATCATAATAAAAGAAAATGTTAAATACGCACATCAAAATGGAAGACCTTTGACAGTCAGTTTGGATGAAATTAAGGCATTTTTGGGCATGAATTTTGTAATGAGTTATCATGTTTTACCAACTTTTAGGAATTACTTGTCAACTGATGAAGATATGGGTGTACCTTTCATTGCTAATGTTATGGCAAGAACTAGATTTGAGCAGATTCGACAAAATGTACACTTCTCTGCAACAACAAACAATATTGTGAGTGATTGTACAATAACAATCACTCACAATCGAGTGATCGAGCGTACAAAATAA

Protein

MSDREYNESPISEVGSRQAEKPLNHEELWRQLIEKQNQNMMALISTLRPHESSRHFTLPEFNPDKEESDARSWCATADICFEDNPPRGGQLIVVISKALKGTASSWLSQISYPGISWPEFKDLFTARFISKDTCAGTLINLHSEKLKDNESLAACASRIITSLMSRWKDCTEEQIAVATALAHISQHDSRLQRLAFTTEITSRQQLQKELQAFSYQKRKAPAAEALSTADSKREKFYKQPTLKCFGCGKLGHRQAECRSKPKNYKPKSLVNTDVASTSHRVEKSTTIRCFKCGVLGHVASHCTAGTGSRGGNTSASTSAERRVDLCVVEPPTGYLQHRDTSETIPIFNWKNNSYAPHTFNESEYEFGRVNTLSDRHGMLLPMDIFMEVTQMDQLVSNIIIKENVKYAHQNGRPLTVSLDEIKAFLGMNFVMSYHVLPTFRNYLSTDEDMGVPFIANVMARTRFEQIRQNVHFSATTNNIVSDCTITITHNRVIERTK

Uniprot

H9JY44 A0A2A4J968 A0A0A9WXF0 A0A0A9WTW7 A0A146KSC7 A0A0A9XB05 + More
A0A0A9XED9 A0A0A9X8W6 A0A0A9X8W2 A0A0K8TH57 A0A146M7T2

Pubmed

19121390 25401762 26823975

EMBL

BABH01042131 NWSH01002289 PCG68667.1 GBHO01032416 JAG11188.1 GBHO01032415 + More
JAG11189.1 GDHC01019258 JAP99370.1 GBHO01026470 JAG17134.1 GBHO01026466 JAG17138.1 GBHO01026462 JAG17142.1 GBHO01026467 JAG17137.1 GBRD01000898 JAG64923.1 GDHC01003813 JAQ14816.1

Proteomes

UP000005204 UP000218220

PRIDE

H9JY44

Pfam

PF00098   zf-CCHC        + More
PF13843   DDE_Tnp_1_7
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17921   Integrase_H2C2

Interpro

IPR036875   Znf_CCHC_sf        + More
IPR001878   Znf_CCHC
IPR029526   PGBD
IPR041577   RT_RNaseH_2
IPR000477   RT_dom
IPR041588   Integrase_H2C2
IPR021109   Peptidase_aspartic_dom_sf

SUPFAM

SSF57756 SSF57756

Gene 3D

2.40.70.10

ProteinModelPortal

H9JY44 A0A2A4J968 A0A0A9WXF0 A0A0A9WTW7 A0A146KSC7 A0A0A9XB05 + More
A0A0A9XED9 A0A0A9X8W6 A0A0A9X8W2 A0A0K8TH57 A0A146M7T2

KEGG

NA

GO

GO:0003676 GO:0008270 GO:0050660 GO:0045454 GO:0005515 GO:0005634 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Length:

497

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03274

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00465

outside

1 - 497

Pi

189.552395

Theta

184.70523

Tajima's D

-0.376992

CLR

1.670459

CSRT

0.269136543172841

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics