Gene

KWMTBOMO08168

Pre Gene Modal

BGIBMGA014381

Annotation

PREDICTED:_apoptosis-inducing_factor_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr14(+):344730-355564      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.919

CDS

ATGGAACACGATAAGAAAGCAAAGGTGTTCTTCATAAGCAAGGAAGACTGTCTACCGTACATTAGACTTCCAATGTCGAAGCAAATGTGGTGGAACCCCGATCCGCCTGACATCAAATCCCTCAACTATTTAGAAGACGGAAAGAGACGCACCATGTACCTAGCGGATTGTTCGAAGTTCATGGATCCGGTGAAGTTTTACCGGACTAAGACCGGACCGGCCGTGTCCGTGGCGACCGGATGGTGCGTGCTGAGGGTGGACGCAGACGAGCACGTTGTCTACGTGAAGACAATGTGCGGCGAGCAGCCTATATACTACGAGAGGTGCTTACTGGCTCCTGGTTCCAAACCGAAGAGTTTGAGCGTGTTCAAGTCGGCGCCCAAAGCGGTCCGGCAGAAGGTGTGCGCGCTGCGGACCGTGCGCGACCTGGAGCTGGCGCAGCGCGGGGTGCGGCGCGCGCGACACGTGGTCGTGCTGGGCGGCGGCTGTCTGGGCACCGAGCTGGCCTGGCATCTGGGGAGGATGAATCAGCTCATCGAACGTAAGCCCGATGAGGAGCCGCTGCAGATAGTCCACGTCTTCAAAGACAAAGGCATCATGGCTGGAGTCATACCAGACTATCTCGGCGAGTGGGCCACTGAGAAGATCAAATGCGAAGGCGTCACCGTAATGCCTAAAACGCAAGTGTACGACGCGTTCGAGACGCCCGACGGGAGGGTCCAGTTGACGCTGTCTAACGGAACTTCCCTGGTCACGGACTACGTGCTAGTGGCGGTGGGAGCCGAACCGCGAATGGAACTGGCCGAACCCTCGTTTCTGGAGCAGGACCCGGTCAACGGCGGATTCCTGGTCAACACAGAACTGGAAGCTAGAACACATCTATACGTTGCCGGAGACGCGGCCAGTGTGTACTCGCAGTGGCGCGACGTCCGCTTCCGGGACGAGCACTACGACACGGCCGAGCGGCTCGGTCTCATCGCCGGCGCCAACATGACGGGCCACTGGCTCGCCTGCAACCTCGAGCCGCACTACTGGCTCCGGCTCGGAGACGCGCTGCAGATGGAGGTGGTGGGTGAAGTGGGGGCTTGTCTCCCGACGATCGCGTTGTTCAAGCAATGCGCTCCTGAAGAGGTCCCCAAAAAGACGGAGACCCCCGCGGGTGATGGCGAAAAACCTTGCTACAAAAAGTCGGAGGAGTACCAGAACCGATACAAGCGAGGCATCGTGTTCTACCTGCGCGACGAGACCGTGGTGGGGCTGGTCTTCTGGAACATGCCGCCCATCGACGACAGGAGGGACGTGGCCACCGAGATCCTTCGCGCTCGACCCTCGTACAAAGATATAAACCTGCTAGCTGAACTCCTGGGCTTCGCAGAGACGCAGTGCGTTTACAAAACGCACGAGCAACTCAAGGAACCTGGTCCTTGCATTCGAAACTGGAGAGAATTTTGA

Protein

MEHDKKAKVFFISKEDCLPYIRLPMSKQMWWNPDPPDIKSLNYLEDGKRRTMYLADCSKFMDPVKFYRTKTGPAVSVATGWCVLRVDADEHVVYVKTMCGEQPIYYERCLLAPGSKPKSLSVFKSAPKAVRQKVCALRTVRDLELAQRGVRRARHVVVLGGGCLGTELAWHLGRMNQLIERKPDEEPLQIVHVFKDKGIMAGVIPDYLGEWATEKIKCEGVTVMPKTQVYDAFETPDGRVQLTLSNGTSLVTDYVLVAVGAEPRMELAEPSFLEQDPVNGGFLVNTELEARTHLYVAGDAASVYSQWRDVRFRDEHYDTAERLGLIAGANMTGHWLACNLEPHYWLRLGDALQMEVVGEVGACLPTIALFKQCAPEEVPKKTETPAGDGEKPCYKKSEEYQNRYKRGIVFYLRDETVVGLVFWNMPPIDDRRDVATEILRARPSYKDINLLAELLGFAETQCVYKTHEQLKEPGPCIRNWREF

Uniprot

E9JEG6   A0A0N1ICV2   A0A212F5H5   A0A194PY77   A0A2W1BF90   A0A2H1WZL8   + More
A0A2M3Z7Q7   A0A2M4AAJ3   W5JKX5   A0A182F616   A0A1Q3FED4   A0A2M3Z799   B0W7M7   A0A2M4BHK9   A0A2M4BHD0   A0A1W4WGV9   A0A1Q3FE57   A0A2M4AAQ2   Q17JG7   A0A182UAE0   A0A1S4GXS5   A0A182WUA0   A0A0C9QS22   A0A182L1R2   Q7Q3U0   A0A182HUW8   A0A182JR64   A0A1Y1LC16   A0A182GSK7   A0A182UYX4   A0A0K8TNI5   E0W028   A0A182RC80   A0A182Y019   A0A443RNN7   A0A087T8Q9   A0A2S2PEQ0   A0A3T0JLN2   A0A2H8TVU6   A0A2S2QWH0   A0A2P2HWW7   A0A182P4V7   A0A423S9X6   A0A087TMI7   A0A1S3LPT9   A0A443SRS7   A0A3S1B2K8   A0A084VND9   A0A1B1GE10   A0A1W4ZEJ7   A0A3B3RGD9   T1J3Z2   A0A1W4ZMW1   A0A1S3LQ11   A0A0P5M571   A0A1S3LQ57   A0A0P4Z3H5   A0A3B3RGH1   A0A1S3LQU2   A0A0P5INF4   A0A1W4ZEJ8   A0A1W4ZN17   T1KHA7   A0A3B3RG57   A0A1S3LPN4   H9GEN1   A0A0P5FRE2   A0A0P4Z9V0   A0A0K8VG98   A0A1S3LPT3   A0A1S3LQ52   A0A1J1IVD3   A0A0P4WPP2   A0A1S3LQ07   A0A1S3LQT7   A0A2C9JBH3   A0A0P5Q211   H2ZVB3   A0A0P5SLX2   A0A0P5BIH7   A0A0P4YA23   A0A182YTT5   A0A0P5HWQ5   A0A0P4WSA2   A0A0N8C166   A0A060WQQ5   A0A0P5ATI5   A0A182QQX4   A0A0P5AQW0   H2ZVB2   A0A0P5WI87   A0A0P5QDI6   A0A0P5BBX7   A0A0P5H8Z7   A0A0T6B2J4   A0A0P5DD02   A0A091KUC9   A0A0P5BJ72  

Pubmed

19121390    21040523    26354079    22118469    28756777    20920257    + More
23761445    17510324    12364791    20966253    28004739    26483478    26369729    20566863    25244985    24438588    27368536    29240929    21881562    15562597    9215903    24755649   

EMBL

BABH01040393    GQ426283    ADM32509.1    KQ460889    KPJ11050.1    AGBW02010196    + More
OWR48986.1    KQ459585    KPI98287.1    KZ150088    PZC73742.1    ODYU01011849    SOQ57824.1    GGFM01003801    MBW24552.1    GGFK01004431    MBW37752.1    ADMH02000877    ETN64791.1    GFDL01009132    JAV25913.1    GGFM01003567    MBW24318.1    DS231854    EDS38062.1    GGFJ01003300    MBW52441.1    GGFJ01003301    MBW52442.1    GFDL01009247    JAV25798.1    GGFK01004550    MBW37871.1    CH477232    EAT46873.1    AAAB01008964    GBYB01003442    JAG73209.1    EAA12325.4    APCN01002480    GEZM01061486    JAV70438.1    JXUM01017001    KQ560472    KXJ82231.1    GDAI01001905    JAI15698.1    DS235855    EEB18984.1    NCKU01000159    RWS16828.1    KK113991    KFM61498.1    GGMR01014767    MBY27386.1    MH393923    AZV23876.1    GFXV01006234    MBW18039.1    GGMS01012908    MBY82111.1    IACF01000468    LAB66242.1    QCYY01004418    ROT61031.1    KK115903    KFM66326.1    NCKV01000613    RWS30165.1    RQTK01000929    RUS73496.1    ATLV01014737    KE524984    KFB39483.1    KX096891    ANQ68316.1    JH431832    GDIQ01169164    JAK82561.1    GDIP01218982    JAJ04420.1    GDIQ01210249    JAK41476.1    CAEY01000074    AAWZ02028191    GDIQ01254295    JAJ97429.1    GDIP01218981    JAJ04421.1    GDHF01029919    GDHF01014446    GDHF01007738    GDHF01004258    JAI22395.1    JAI37868.1    JAI44576.1    JAI48056.1    CVRI01000057    CRL02497.1    GDIP01253412    JAI69989.1    GDIQ01120229    JAL31497.1    AFYH01037266    AFYH01037267    AFYH01037268    AFYH01037269    AFYH01037270    GDIP01138138    JAL65576.1    GDIP01199072    JAJ24330.1    GDIP01230526    JAI92875.1    GDIQ01221184    JAK30541.1    GDIP01253370    JAI70031.1    GDIQ01124931    JAL26795.1    FR904563    CDQ66945.1    GDIP01199071    JAJ24331.1    AXCN02000801    GDIP01209724    JAJ13678.1    GDIP01086083    JAM17632.1    GDIQ01115631    GDIQ01115630    JAL36096.1    GDIP01186631    JAJ36771.1    GDIQ01236431    JAK15294.1    LJIG01016118    KRT81561.1    GDIP01163173    JAJ60229.1    KK758711    KFP44204.1    GDIP01184131    JAJ39271.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000000673    UP000069272    + More
UP000002320    UP000192223    UP000008820    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000075881    UP000069940    UP000249989    UP000075903    UP000009046    UP000075900    UP000076408    UP000285301    UP000054359    UP000075885    UP000283509    UP000087266    UP000288716    UP000271974    UP000030765    UP000192224    UP000261540    UP000015104    UP000001646    UP000183832    UP000076420    UP000008672    UP000193380    UP000075886   

PRIDE

E9JEG6   

Pfam

PF07992   Pyr_redox_2        + More
PF14721   AIF_C
PF08393   DHC_N2
PF14962   AIF-MLS
PF16020   Deltameth_res

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR023753   FAD/NAD-binding_dom       
IPR016156   FAD/NAD-linked_Rdtase_dimer_sf       
IPR029324   AIF_C       
IPR013602   Dynein_heavy_dom-2       
IPR032773   MGARP_N       
IPR031973   Deltameth_res_prag01       
IPR013083   Znf_RING/FYVE/PHD       
IPR020846   MFS_dom       
IPR040176   RNF121/RNF175       
IPR001841   Znf_RING       

SUPFAM

SSF51905   SSF51905        + More
SSF55424   SSF55424       

Gene 3D

3.30.390.30     3.50.50.60     3.30.40.10    

CDD

cd06174  MFS

ProteinModelPortal

E9JEG6   A0A0N1ICV2   A0A212F5H5   A0A194PY77   A0A2W1BF90   A0A2H1WZL8   + More
A0A2M3Z7Q7   A0A2M4AAJ3   W5JKX5   A0A182F616   A0A1Q3FED4   A0A2M3Z799   B0W7M7   A0A2M4BHK9   A0A2M4BHD0   A0A1W4WGV9   A0A1Q3FE57   A0A2M4AAQ2   Q17JG7   A0A182UAE0   A0A1S4GXS5   A0A182WUA0   A0A0C9QS22   A0A182L1R2   Q7Q3U0   A0A182HUW8   A0A182JR64   A0A1Y1LC16   A0A182GSK7   A0A182UYX4   A0A0K8TNI5   E0W028   A0A182RC80   A0A182Y019   A0A443RNN7   A0A087T8Q9   A0A2S2PEQ0   A0A3T0JLN2   A0A2H8TVU6   A0A2S2QWH0   A0A2P2HWW7   A0A182P4V7   A0A423S9X6   A0A087TMI7   A0A1S3LPT9   A0A443SRS7   A0A3S1B2K8   A0A084VND9   A0A1B1GE10   A0A1W4ZEJ7   A0A3B3RGD9   T1J3Z2   A0A1W4ZMW1   A0A1S3LQ11   A0A0P5M571   A0A1S3LQ57   A0A0P4Z3H5   A0A3B3RGH1   A0A1S3LQU2   A0A0P5INF4   A0A1W4ZEJ8   A0A1W4ZN17   T1KHA7   A0A3B3RG57   A0A1S3LPN4   H9GEN1   A0A0P5FRE2   A0A0P4Z9V0   A0A0K8VG98   A0A1S3LPT3   A0A1S3LQ52   A0A1J1IVD3   A0A0P4WPP2   A0A1S3LQ07   A0A1S3LQT7   A0A2C9JBH3   A0A0P5Q211   H2ZVB3   A0A0P5SLX2   A0A0P5BIH7   A0A0P4YA23   A0A182YTT5   A0A0P5HWQ5   A0A0P4WSA2   A0A0N8C166   A0A060WQQ5   A0A0P5ATI5   A0A182QQX4   A0A0P5AQW0   H2ZVB2   A0A0P5WI87   A0A0P5QDI6   A0A0P5BBX7   A0A0P5H8Z7   A0A0T6B2J4   A0A0P5DD02   A0A091KUC9   A0A0P5BJ72  

PDB

5FS7     E-value=1.32522e-68,     Score=660

KEGG

100529220    K04727 apoptosis-inducing factor 1 [EC:1.-.-.-] | (RefSeq) aif; apoptosis-inducing factor

PATHWAY

04214    Apoptosis - fly - Bombyx mori (domestic silkworm)

GO

GO:0016491   GO:0016021   GO:0046983   GO:0050660   GO:0016887   GO:0003341   GO:0003777   GO:0005858   GO:0008860   GO:0006919   GO:0003677   GO:0005758   GO:0005829   GO:0005634   GO:0070059   GO:0016174   GO:1902510   GO:0051402   GO:0071949   GO:0046872   GO:0045454   GO:0005515   GO:0030145   GO:0006412   GO:0016876   GO:0043039   GO:0055114  

PANTHER

PTHR13407  

Length:

483

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.71726

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.09976

outside

1  -  483

 

 

Pi

189.851526

Theta

152.826538

Tajima's D

1.354138

CLR

1.058822

CSRT

0.744612769361532

Interpretation

Uncertain