Silkworm Genome Informatics Database

Gene

KWMTBOMO08165

Pre Gene Modal

BGIBMGA014363

Annotation

PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_pan1_[Bombyx_mori]

Location

Bomo_Chr14(-):304472-331529 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.237

CDS

ATGCCGAATAAAGATAATATCCGTACACCAACAACTGAGGTTAAACCTTCAATCAATCCAGTGCTACAAGTAGTAACAGCTAAAAGTACAATGGTACCAATCAAAGTTGTACCTAAGGCGATGAAAGAGACACCCATGTCTCCGCCGTCGATGAGCCCAGCCGACACGGAGCGCACGGAGCTGCTGGGGTCGTTGACCACACAGCAGCAGCAGAGGACCAGCGCAAGGGTCATCAAGAAGCTAAAACTCGAGCCCCAAGGAGACAAGAGGGTCGCCAAGAGATCGGAAGGCGCTTCCGATGACATAACAGAATGCGAGACTCCAAACAAAATTGACGATAAGGACGCTTTAAAGTTCCCGACGGTCAAACAGCGCATGCCCAAGGCTCTGTGGTCCACGGACGAAAAGAATCTATTCTTCGAGGCCCTCAATGAGTACGGGAAGGACTTCGATGCGATCACGGCGTACATCCGCGGTAAAATAAAGAAGAAAGGAATGCCTGAAGCCAATATGAAGACGAAGACCCAAGTCAGCCATTTCTACTACAGGACCTGGCATAAACTATCTAAGCACGTACGTTTTGATGAAAACGTAAAGAAGGTAGCGCAAGAGCTATACGCGTTGATCAACTACGGCGAGCTCCGCAAGAAGCTGGTGTCGGTGAGCGAGAAGACGTGCGGGCGGCTGGACGAGCTGGTGCGGCGCGGCGGGCTGGCGGTGCGCGCGCGCGGACGCACCCTGCGCGTGCGCACGCCCATGTGCCCAGCACTGCGCGCGCTCAATCACATCACCGAGCGCTCGTGCAGTTCGCGCGTGTGCAGCCGCGCGTGCGTGTCGCTGCGGGCGCGCGACGCGGGCGCGTGGGGGCGCGTGCAGGCCGCCGCGCACAACCCGCGCCTGGCGCTGGCACTGCCGCCGCGCGTCTCCCTGCGCGCGCTGCTGCGGGCCCTGCACGCGCGCTGGAAGGGAACCTTGTCGGACCAGAAGCACACGCATGGGGTCTCCGAGAGCGCGGACACGAAAGGTTCAGAGGAGCTGTGCAGAGATACAGACGAGTACCCCGCCCTGACACAGGGCTGCCCCGAGGACAAAGACGACGAGAAGGAGGAGGACGGACACCACCTCGGCTTGGAAACGGATCGGGTCATAGTTCACGAACAGCGACAAGTCAAAAAACTGGCTCTGCACCTGGGCCCCAGGCCTGACGCGGAGATCCACATCCCGGTGGTCAGTCCCAGCGAACAGCTGTCCAGCCAGAAGATCTGCTTCTCTTCGTACCTGGAGAGGATGGGGAAACTCCGTCGGGACAAGGACGGGGTCGGAGCGAAGATCCGCACGCCGAAGCGGCTGCGCAAGGACAGCGCCACGGAGAGGGAGCTCGACACCAAGAAATACAAAACGGACGACAACGAGAAGCTGATCAACATCGACGAGACCGCCATCGACGGCGTGGAGCTCATGGCCTCCTACAGGCACCACCTCGACGACGAGGAGAAACCCAGCACCGAGGACGAGAAAGAGGCGCCGGAGGAGTACGCCGACCGGGAGAAGGACATGTCCGAGAGGGAGAAGGACAGCCTGTCCGAGCTGGAGGACGACGACAAGTACAACAAGAGCGACACGGACAACGACAGCGACCCGGGGAGAGCCGACAGGAAGGAGCAGAAGCTGAACAACCTCAAGGTAAAATTCCGCATAAGACAAAAGAAACGAGGCGGCTCGATATACACGCTGGTCATGGATAAGGATGACGACCCCGGACTCAAGGACGATACTTTGAAGGTAGACGACGGTATGAAGGTAGACGAAGAGATCAAGCCCCAGATAGACGTGGACACAGCCCTCAAGCAGATCCGGAGGGGCTGGAGCATCCACGACGCCGGAGATTTGACCATAGGGGATCTTTATTTAATGTTCGGTTCCCGATCGAAAATAGAGCTGGACTACTGGTGGGCGGTGCCCACTCCGCCCCTGCCCGGGCCCCCCAGCATAGAGAAGAAAGACAAGCCTGAAGCGCCGTGCGCGGACAGGAAGGACAGGACACCGGACAAAGGCGACAGCTCTGTGGAAGATGAAGGGAAAAGAGAGAGTGACAATGATATATTTTCACCAAAGAACACGTATAGTCAAGACAGCAACGACGGCGCTTCTGGAGACGAGAGAAAAGGTGAGCAGACCTTATCCCCGGAGCACAAGTGGAGCGGATCTTTGAAACTGGTCTCCAAGCTTCTCAACCGCCCGACGCCGGCCGCCTCCGTTTCTCAGAATGGGTTTGCGCTGCTCAGCGAGAGGTTTGCATCCATCCTCCTCCTCATCCTCCTTGGGACTGAGGCGCTAGACCTTTACGTTAGCTCTCATATCCTCTTTACACAGACTAAGCTTTTCCACCTTGAGGTTTTTTTAAGGCATTTTATGACCAGGTAA

Protein

MPNKDNIRTPTTEVKPSINPVLQVVTAKSTMVPIKVVPKAMKETPMSPPSMSPADTERTELLGSLTTQQQQRTSARVIKKLKLEPQGDKRVAKRSEGASDDITECETPNKIDDKDALKFPTVKQRMPKALWSTDEKNLFFEALNEYGKDFDAITAYIRGKIKKKGMPEANMKTKTQVSHFYYRTWHKLSKHVRFDENVKKVAQELYALINYGELRKKLVSVSEKTCGRLDELVRRGGLAVRARGRTLRVRTPMCPALRALNHITERSCSSRVCSRACVSLRARDAGAWGRVQAAAHNPRLALALPPRVSLRALLRALHARWKGTLSDQKHTHGVSESADTKGSEELCRDTDEYPALTQGCPEDKDDEKEEDGHHLGLETDRVIVHEQRQVKKLALHLGPRPDAEIHIPVVSPSEQLSSQKICFSSYLERMGKLRRDKDGVGAKIRTPKRLRKDSATERELDTKKYKTDDNEKLINIDETAIDGVELMASYRHHLDDEEKPSTEDEKEAPEEYADREKDMSEREKDSLSELEDDDKYNKSDTDNDSDPGRADRKEQKLNNLKVKFRIRQKKRGGSIYTLVMDKDDDPGLKDDTLKVDDGMKVDEEIKPQIDVDTALKQIRRGWSIHDAGDLTIGDLYLMFGSRSKIELDYWWAVPTPPLPGPPSIEKKDKPEAPCADRKDRTPDKGDSSVEDEGKRESDNDIFSPKNTYSQDSNDGASGDERKGEQTLSPEHKWSGSLKLVSKLLNRPTPAASVSQNGFALLSERFASILLLILLGTEALDLYVSSHILFTQTKLFHLEVFLRHFMTR

Uniprot

H9JXU5 A0A2H1X0R3 A0A2W1BM06 A0A0N0PBK7 A0A212EY93 A0A194PY82 + More
A0A437BLS7 W8AKQ0 W8B7M6

Pubmed

19121390 28756777 26354079 22118469 24495485

EMBL

BABH01040388 BABH01040389 ODYU01012099 SOQ58214.1 KZ150088 PZC73740.1 + More
KQ460889 KPJ11054.1 AGBW02011582 OWR46455.1 KQ459585 KPI98292.1 RSAL01000037 RVE51188.1 GAMC01017325 JAB89230.1 GAMC01017324 JAB89231.1

Proteomes

UP000005204 UP000053240 UP000007151 UP000053268 UP000283053

PRIDE

H9JXU5

Interpro

IPR009057   Homeobox-like_sf        + More
IPR017884   SANT_dom
IPR001005   SANT/Myb

SUPFAM

SSF46689 SSF46689

CDD

cd00167 SANT

ProteinModelPortal

H9JXU5 A0A2H1X0R3 A0A2W1BM06 A0A0N0PBK7 A0A212EY93 A0A194PY82 + More
A0A437BLS7 W8AKQ0 W8B7M6

KEGG

101736666 no KO assigned | (RefSeq) actin cytoskeleton-regulatory complex protein pan1

GO

GO:0003677 GO:0005634 GO:0016887 GO:0030286 GO:0016791 GO:0005515 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Subcellular location

Nucleus

Length:

807

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.20462000000001

Exp number, first 60 AAs:

0.00374

Total prob of N-in:

0.00058

outside

1 - 807

Pi

264.882167

Theta

183.482471

Tajima's D

1.28237

CLR

0.753175

CSRT

0.733363331833408

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics