SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08160
Pre Gene Modal
BGIBMGA014365
Annotation
putative_dynein?_axonemal?_heavy_polypeptide_1_[Danaus_plexippus]
Full name
SAGA-associated factor 11 homolog       + More
Dynein heavy chain 1, axonemal      
Alternative Name
Axonemal beta dynein heavy chain 1
Ciliary dynein heavy chain 1
mDHC7
Heat shock regulated protein 1
hDHC7
Location in the cell
Cytoplasmic   Reliability : 1.539 PlasmaMembrane   Reliability : 1.425
 

Sequence

CDS
ATGCACTCCAGCGAGGGGGAGACGGTGGAGCTCAAGTACAAGTTCTACCCCACTGCAAACGTGGAACAGTGGCTCTTGCTGCTGGAGGACACCATGAAAAACACCATCCGACTGACCCTGATCGACAGTCTGGAGGAGATCTGGGTGCTGCCCCGCGCCGAGTGGGTGCTGCGCTGGCCGGGGCAGGTCGTCATCGCGGGCAGCCAGCTGGCCTGGACCGCCGGTGTCGAGGACGCCATACGGAACTGTTGCGTCGACGTCTTCTATGAGAATATGCTGAAACAGCTGGACAGCCTGCGCGCGCTGGTGAAAGGCGAGCTGTCGTGGTTCCACCGCGAGGTGGTGTGCGCGCTGCTCGTGGTGGAGGTGCACGCGCGTGACGTCACGGACGCGCTGCGGGCCGTGCGCGCGCTCACGGACTTCCACTGGATCTCGCAGCTGCGATATTACGAGGTGGTAAACGAACCCCGTCCCCTGGAAGAGGGCGAGTCCCCGGAAGTGTACCAGGACGAGGAGGTGCTCGATACGAGCATGTACTATCGGCAGTTTAGTCAGAACTGCTGCGAAGTCAGAGCTCTTAATGCAGTCTTCATCTACCAGAATGAATATCTCGGGAACAGCGGTCGGCTGGTGATCACGCCGCTGACGGACCGGTGCTACCTCACGCTGATGTGCGCCATGCGGGTCCACCAGGGCGCGGCGCCCGCGGGCCCGGCCGGCACCGGCAAGACCGAGACCACGAAGGATTTAGCCAAAGCCTTAGCCGTTCAGTGCGTAGTGTTCAATTGCTCGGACCAGCTGGACTACATGGCGATGGGCAAGTTCTTTAAGGGATTGGCTGCTTCAGGGGCCTGGGCGTGCTTCGATGAGTTTAACAGAATAGACATTGAAGTGCTCTCCGTAGTTGCCCAGCAGGTGGCGACGATCCAGAAAGCGCAAGTGGCCAAGCTGGACAAGTTCATGTTCGAGGGTATCGAGCTGCCCATCAAGGCTTCCTGTTCAGTTTTCATCACCATGAACCCTGGATATGCAGGTCGCACGGAGCTACCTGAAAATTTGAAGGCTCTCTTCCGCCCCATCGCCATGATGGTTCCAGATTATGCTCTCATCGCGGAAATTTCTCTTTTCTCTTACGGCTTCTACGAAGCAAAGATCCTCGCAGGGAAGATCACCACTACCTTCAGACTTAGTTCGGAACAACTGTCTTCTCAGGACCACTACGACTTCGGCATGCGCGCCGTGAAGACCGTGATCGTGGTGGCCGGCAACCTCATGCGGCAGCAGCCCGGCGGCGACGAGCGCCAGCTGGTGCTGCGCGCGCTGCGGGACGTCAACGTGCCCAAGTTTCTCGCCGAAGACCTGCTGCTCTTCAACGGTATAATATCGGATCTGTTCCCGCGAGTGGAGATCCCGGTGGTGGACTACGGGATCATGGAGCAGTCCATCCGCAGCGTGCTCGTCAAGCGAGGGTACGACGACGTCTACGCCTTTATATTCAAGATAATTCAGCTGTACGAGACCACGGTGGTCCGGCACGGCCTGATGCTGGTGGGGCCCGCGGGCGCCGGGAAGACCAAGTGTTACGAGATCCTGCGCGACGCCCTGACCGCCATCAAAGGGAAGCCCGCCCCGGACGGCACGCCCTTCGCCCCGGTGCACACCTTCGTGGTCAACCCCAAGTCCATAACGATGGGGCAGCTGTACGGGGAGTTCGACCTCCAGACTCACGAATGGACGGATGGCATCTTATCGAGTCTGGTCCGCATGGGCATCGCGGTGGAAGACATGGACAAGCGATGGTATGTCTTCGACGGGCCAGTTGACGCTGTCTGGATCGAGAATATGAATACTGTGCTGGACGACAACAAGAAGCTGTGCCTGTCGAGCGGTGAGATCATGAAGCTGACGGAGCGGCAGCGCATGCTGTTCGAGGTGGCGGACCTGGCGGTGGCGTCCCCCGCCACGGTGTCGCGCTGCGGCATGGTCTACATCGACGCGGAGGTGGTGGGCCTGCTGCCGCTCGTCAACGCCTGGCTCCGCTCCTCCATCCCGCCGATGGCGGATAACATACGCAAGATCCTGCCGAACCTGATCACGACGTACCTGTACCCGTCGCTGGTGCTGCTGCGCACCAAGCTCACGGAGATGGTGCCGTCCCTGGACTCGGCACTGGTCTTAAAGTTCCTAGAACTGTTGGACTTCAGGCTCCGGCCGCTCACCGGGAAGGACGACAAGCCTCCACCGGGACCTGCCTTCATAGCCCTCATGCCCCGCCTGGCGCCGTGCTGGGTGGTGTGGGCAACGGTGTGGACCGTGGGCGCCACGTGCGACCTGGCTGGCCGCGCCGTGTTCTCCACCTTCATGCGCGACCTCACCACGCAGAACGGACTCAAGCCGCCTTTTCCCAAGGAGGGCAGGGTTTATGACTACACTTTGCACGACGGCGGGTTCACGGAGCCGACCGAGGACGGCGAGCCCGCCGCGCCCTACTGGTACAACTGGATGCAGAACCTGGACGCCTACGAAGTGGACCCGGACTGCCAGTACTCGGATATCGAAGTCCCGACCATAGACAACGTGCGCAGCGCGGCCCTGCTGGGCTACAAGGTGTGGTGCCAGCGGGCGGCGCTGTGCGTGGGGCCCACGGGCGCCGGCAAGACGCTCACCATCACCTCCAAGCTCAGCCGCGGACTGCACAAGAAGTTCATTTGCGAATTCATCGTGTTCTCGGCGAGGACCTCGGCCAACCAGACCCAGGACGTCATCGACAGTAAGCTGGAACGTCGGCGCCGCGGAGTATTCGGGCCGCCGCCGACCAAGTACCAGGTGTTCTTCATCGACGACCTCAACATGCCCGCGCTTGAGGTCTACGGAGCGCAACCTCCCATCGAGCTGCTCAGACAGTTTATGGACTTTTCTGGCTGGTACGACCGTCTGAACATAGGCGAGTTCAAGACCCTGGTGGACGTGACCATGGTGGGCGCCATGGGACCGGCCGGGGGAGGACGGAACCCCGTCACGGCCAGGCTGCTGCGCCACATGCACTACATTTCATTTACGGAGATGGAGTATACTAGCAAGTACACAATCTTCAGCGTTATCTTGAAGTCTTGGACGAGAAATTTCGACAAGGTGTCGATAAGAGAGGCCCCATTCTTGAAGGCGTCCATAGATATCTTCAGCTCTCTCGTGGAGGAACTTCTGCCGACTCCTACCAAGTCTCACTACACTTTCAACATGAGGGATCTTAGTAAAGTCTTCCAGGGTATACTGATGATGGATCCTCGGCTTGTCAAGGACGAAGACGACGTCATCAGGCTGTGGTACCACGAGCACCAGCGCGTGTACCAGGACCGTCTGATCAACGATGAGGACCGCCAGTGGTTTGTCAATTTACTAAACAAGAAGATCCGTTCGGAGTTCGGCAAGAAGCCGGGCGAGGTGACCGGCGGCCGCCTCCTGCTGTTCGGAGACTTCATGGACCTCGGCGCCGACGACAAGAAGTACGTGGAGATCACCGACGCCGCCGAGTTAAATGAGATCTTGGCCCACTACCTGCGCGAGTACAACGCCTCCACCACCGCCCCGCTCGAGCTGGTGCTGTTCGAGGACGCCGTGGCTCACCTCTGCAGACTTTCCAGGATCATGAGGCAGCCGATGGCCAACGCCCTGCTCCTCGGGATGGGAGGGTCGGGTCGCCAGTCGCTGTCCAGGCTGTCGGCCTCCATGTCGGAGCTGGCGTGCGTGCAGATCGAGATCACCAAGTCGTACGGGCAGCAGGAGTGGCGGGACGACCTGCGGCAGACCATGCTGAAGGCCGGCGCCGAGAACAGAGGAACCGTCTTTTTATTTTCGGATGCCCAGATAAAAATGGAATCGTTCCTTGAAGACGTGAACAGCATCCTGAGCTCGGGCGACGTGGCCAACATCTACGAGCCCGAGGACCTGGACCGGATCTACATGTCGGTCCGCCACGCCGTCATGGAGATGAACCTGCCCGCCACCAAGACCAACCTGTTCTCCTGCTACCAGAAGAGGGTCCGGAACAACTTGCACATCGTTATCGTCATGAGCCCCATCGGAGATGTGTTCCGCGGCAGACTGCGGCAGTTCCCGGCGCTGGTGTCGTGCTGCACGCTGGACTGGTACAGCGAGTGGCCGCGCGCCGCCCTGCGCTCCGTCGCCAACCACTTCTTCACCAACATGCCGGAGCTCGACACCACGGCCGATGTGCTGGACGCCATGGTGTCTGCGTGCTGCGAGGCGCACGTGAGCGTGGCGGAGACCAGCGCCGCGTTCCTGGCGCGCCTGGGCCGCCGGAACTACGTCACGCCGATGTCCTACATGGAGATGCTGTCCGCCTACAGAGACATGTTCAGGAACAAGAGGAACTCGATACTCGAGGAGTCCAACGCCCTCAGGAACGGCTTGAACAAACTGAATCAAACCGAGATAGAAGTGAAACAACTTCAGATTGAACTGGCTGAGCTGAAACCCCTGATGGAGAAGGCGGCCCAAGAAACCAGGGTAGTCATTGAGCAGATCGCGATAGACACTGCCATAGCGGAAGACGCTCGGTTGAAAGTGGAGAAGGAGCAGGCCATAGCGGAGCAGATGGCCGCCGAGACTACGGCCATGGCGGAGGACGCTCAGAGAGATCTCGACGAGGCCCTGCCGGCCCTGCGCGCGGCGGAGCAAGCCCTGCAGGAACTGAACAGGAACGACATAGTGGAGGTGAAGGCTCTGAAGAAGCCGCCAGCAGGAGTCATTCTCGTCATAGAGTCGCTCTGTGTGGTCTTTGATATCAAACCTATCAAGGAGCCCGGCGCCACGTTCGGAGTGAAGGTGCTGAACTACTGGCGGCCGGGCAGCGCCATGCTTGCCGACCCCACCGCCTTCCTCGACTCGCTCATCAACTATGATAAGGACTCCATCACTGAGGACACCATCAAGAAACTGAAGAAGTTCATACAGAACCCAGACTATGAACCCAACAAGATTGCCAAGGTGTCGAAGGCGTGCATGTCGCTGTGCATGTGGGTGCACGCCATGTACAAGTACTACCACGTCAACACCGGCGTCGCGCCCAAGCGGGCCGCCCTCGCCGAGGCCGCCGCCCGCCTGCACGCCGTCACACGAATGTTAGAAAGCACAAAAGCTAAGATGAGAGCTTTGCTGGAAGGCATTGCGAAGCTCGACGCATACCTCCAGGAGAAGGAAGAGGAAAAGAGACGGATGGAGGAGGACATCAACCAGTGCCTCGCCAGGATGGACCGCGCCCACAGGTGGGACCGGCGCGTGCTCATCATTATACCGCAACATTAG
Protein
MHSSEGETVELKYKFYPTANVEQWLLLLEDTMKNTIRLTLIDSLEEIWVLPRAEWVLRWPGQVVIAGSQLAWTAGVEDAIRNCCVDVFYENMLKQLDSLRALVKGELSWFHREVVCALLVVEVHARDVTDALRAVRALTDFHWISQLRYYEVVNEPRPLEEGESPEVYQDEEVLDTSMYYRQFSQNCCEVRALNAVFIYQNEYLGNSGRLVITPLTDRCYLTLMCAMRVHQGAAPAGPAGTGKTETTKDLAKALAVQCVVFNCSDQLDYMAMGKFFKGLAASGAWACFDEFNRIDIEVLSVVAQQVATIQKAQVAKLDKFMFEGIELPIKASCSVFITMNPGYAGRTELPENLKALFRPIAMMVPDYALIAEISLFSYGFYEAKILAGKITTTFRLSSEQLSSQDHYDFGMRAVKTVIVVAGNLMRQQPGGDERQLVLRALRDVNVPKFLAEDLLLFNGIISDLFPRVEIPVVDYGIMEQSIRSVLVKRGYDDVYAFIFKIIQLYETTVVRHGLMLVGPAGAGKTKCYEILRDALTAIKGKPAPDGTPFAPVHTFVVNPKSITMGQLYGEFDLQTHEWTDGILSSLVRMGIAVEDMDKRWYVFDGPVDAVWIENMNTVLDDNKKLCLSSGEIMKLTERQRMLFEVADLAVASPATVSRCGMVYIDAEVVGLLPLVNAWLRSSIPPMADNIRKILPNLITTYLYPSLVLLRTKLTEMVPSLDSALVLKFLELLDFRLRPLTGKDDKPPPGPAFIALMPRLAPCWVVWATVWTVGATCDLAGRAVFSTFMRDLTTQNGLKPPFPKEGRVYDYTLHDGGFTEPTEDGEPAAPYWYNWMQNLDAYEVDPDCQYSDIEVPTIDNVRSAALLGYKVWCQRAALCVGPTGAGKTLTITSKLSRGLHKKFICEFIVFSARTSANQTQDVIDSKLERRRRGVFGPPPTKYQVFFIDDLNMPALEVYGAQPPIELLRQFMDFSGWYDRLNIGEFKTLVDVTMVGAMGPAGGGRNPVTARLLRHMHYISFTEMEYTSKYTIFSVILKSWTRNFDKVSIREAPFLKASIDIFSSLVEELLPTPTKSHYTFNMRDLSKVFQGILMMDPRLVKDEDDVIRLWYHEHQRVYQDRLINDEDRQWFVNLLNKKIRSEFGKKPGEVTGGRLLLFGDFMDLGADDKKYVEITDAAELNEILAHYLREYNASTTAPLELVLFEDAVAHLCRLSRIMRQPMANALLLGMGGSGRQSLSRLSASMSELACVQIEITKSYGQQEWRDDLRQTMLKAGAENRGTVFLFSDAQIKMESFLEDVNSILSSGDVANIYEPEDLDRIYMSVRHAVMEMNLPATKTNLFSCYQKRVRNNLHIVIVMSPIGDVFRGRLRQFPALVSCCTLDWYSEWPRAALRSVANHFFTNMPELDTTADVLDAMVSACCEAHVSVAETSAAFLARLGRRNYVTPMSYMEMLSAYRDMFRNKRNSILEESNALRNGLNKLNQTEIEVKQLQIELAELKPLMEKAAQETRVVIEQIAIDTAIAEDARLKVEKEQAIAEQMAAETTAMAEDAQRDLDEALPALRAAEQALQELNRNDIVEVKALKKPPAGVILVIESLCVVFDIKPIKEPGATFGVKVLNYWRPGSAMLADPTAFLDSLINYDKDSITEDTIKKLKKFIQNPDYEPNKIAKVSKACMSLCMWVHAMYKYYHVNTGVAPKRAALAEAAARLHAVTRMLESTKAKMRALLEGIAKLDAYLQEKEEEKRRMEEDINQCLARMDRAHRWDRRVLIIIPQH

Summary

Description
Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
Force generating protein of cilia required for sperm flagellum motility (PubMed:11371505). Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP (By similarity). Required in spermatozoa for the formation of the inner dynein arms and biogenesis of the axoneme (By similarity).
Force generating protein of cilia required for sperm flagellum motility. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required in spermatozoa for the formation of the inner dynein arms and biogenesis of the axoneme (PubMed:24360805).
Subunit
Component of some SAGA transcription coactivator-HAT complexes. Within the SAGA complex, participates to a subcomplex of SAGA called the DUB module (deubiquitination module).
Consists of at least two heavy chains and a number of intermediate and light chains.
Similarity
Belongs to the SGF11 family.
Belongs to the dynein heavy chain family.
Keywords
Alternative splicing   ATP-binding   Cell projection   Cilium   Coiled coil   Complete proteome   Cytoplasm   Cytoskeleton   Dynein   Flagellum   Microtubule   Motor protein   Nucleotide-binding   Reference proteome   Ciliopathy   Disease mutation   Kartagener syndrome   Polymorphism   Primary ciliary dyskinesia  
Feature
chain  Dynein heavy chain 1, axonemal
splice variant  In isoform 2.
sequence variant  In dbSNP:rs10460963.
EMBL
KQ459585    KPI98285.1    BABH01040385    DS235030    EEB10716.1    PZQS01000006    + More
PVD29059.1    KB202619    ESO89348.1    NEDP02004067    OWF46845.1    RQTK01000491    RUS78759.1    AMQN01004546    AMQN01004547    KB293809    ELU15361.1    KQ434772    KZC03876.1    JH816168    EKC41830.1    RCHS01001119    RMX55115.1    GECZ01025168    JAS44601.1    GG666510    EEN60796.1    GEEE01015646    JAP47579.1    GEEE01020327    JAP42898.1    REGN01004975    RNA15333.1    CM004472    OCT85694.1    AGTO01011004    AKHW03006215    KYO22997.1    BEZZ01000623    GCC34692.1    AANG04000016    ABQF01031696    ABQF01031697    UZAN01040308    VDP69207.1    AAPE02022324    AAPE02022325    KL897320    KGL84335.1    AAQR03061720    AAQR03061721    AAQR03061722    AAQR03061723    AAQR03061724    AAQR03061725    AAQR03061726    AAQR03061727    AK053204    AC108416    CH466573    BC023155    Z83815    AABR07072490    AC095672    AC099108    NOWV01000159    RDD38836.1    DS985267    EDV19716.1    AMGL01045540    AMGL01045541    AMGL01045542    AMGL01045543    AB037831    AK023766    AK074130    AK125990    AB290163    AC092045    KF459588    AJ132083    AJ132094    U61738    Z83804    U83571    AY221994    AL117428    AAGW02044169    AAGW02044170    AAGW02044171    NDHI03003498    PNJ32495.1    HM005373    AEE60973.1    KQ978625    KYN29645.1    AFYH01005848    AFYH01005849    AFYH01005850    AFYH01005851    AFYH01005852    AFYH01005853    AFYH01005854    AFYH01005855    AFYH01005856    AFYH01005857    KL205959    KFV77546.1    PVD29061.1    ABGA01132802    ABGA01132803    ABGA01132804    ABGA01132805    ABGA01132806    ABGA01132807    GL832958    EGD80666.1    AGTP01005611    AGTP01005612    AJFE02064152    AJFE02064153    AJFE02064154    AJFE02064155    NBAG03000218    PNI80296.1    AAWZ02028659    AAWZ02028660    AAWZ02028661    AACZ04000327    LSMT01000171    PFX24646.1    AKCR02000111    PKK20416.1    CABD030021461    KB016744    EPY84637.1    KQ981490    KYN41140.1    JH881365    ELR54718.1    AAEX03012197    GAMS01001321    JAB21815.1    FQ310506    CBN81050.1    KL224918    KFW65598.1    ACTA01154541    ACTA01162540    ACTA01170538   
Pfam
PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF08209   Sgf11
PF05161   MOFRL
PF13660   DUF4147
Interpro
IPR042222   Dynein_2_N        + More
IPR035706   AAA_9       
IPR041589   DNAH3_AAA_lid_1       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR026975   DNAH1       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR004273   Dynein_heavy_D6_P-loop       
IPR013602   Dynein_heavy_dom-2       
IPR026983   DHC_fam       
IPR042219   AAA_lid_11_sf       
IPR035699   AAA_6       
IPR042228   Dynein_2_C       
IPR041228   Dynein_C       
IPR041658   AAA_lid_11       
IPR013246   SAGA_su_Sgf11       
IPR013243   SCA7_dom       
IPR025286   MOFRL_assoc_dom       
IPR007835   MOFRL       
IPR038614   GK_N_sf       
SUPFAM
SSF52540   SSF52540       
PDB
5NUG     E-value=0,     Score=1701

Ontologies

Topology

Subcellular location
Nucleus  
Cytoplasm  
Cytoskeleton  
Cilium axoneme  
Cell projection  
Cilium  
Flagellum  
Length:
1774
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.10169
Exp number, first 60 AAs:
0.00061
Total prob of N-in:
0.00036
outside
1  -  1774
 
 

Population Genetic Test Statistics

Pi
261.706884
Theta
205.094606
Tajima's D
1.495506
CLR
0.162052
CSRT
0.783010849457527
Interpretation
Uncertain
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