Gene

KWMTBOMO08149

Pre Gene Modal

BGIBMGA012135

Annotation

Vacuolar_protein_sorting-associated_protein_13C_[Operophtera_brumata]

Location

Bomo_Chr14(-):25695-28205      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.866

CDS

ATGTTTTTAGAAAGATATCATGACTATGCAGTACTATTATTACAAGAAATAATGCCACGGGAGATTGCTTTTGATGGAACACTATCAATATGCAACCCTTGCTGGCTGAGATTTTATCGCGCAGTGCAAGTCCGGCCAGTAGACGATCCATTACCTCAGCAAGTTCAAGAACCATTACCCCAGCAAGTACAAGAAGAGGAAGTCCAAGAAATAGTAGTTGACGTTCAACAACAACAAGACATAGGTCTTATGACTATTCCTGGATATTTGCGTGTATCTAATACTGCTCGACGCTGTGTTTTTCAAAACTGCAGAAACGTACCAGCAAATGCTGTGCCAAAATATGTCAGGTTACATTTTTTTCGTATTAATAAGCTATTCATACCAAAACTTGCTCGAGTTTGCCAACCCCATATGATAAACAATGAATGGGAAGATCTACTTAATGAGCAAATACCTCTTCATGAAAACTTTAATAGTGCTCATGTTCTCGATATTATCGAGCTGTATGAATGGAGATTGGAACGAGGAACTCAGTTGGACTTCGAAAATGTTGAGGAGATAGATGACAATGAACTACATTTTTATACGGGTATGGATAAAATTCAATTCAATAATATTTTGAATCAAACATCTTCTCTACGTGATAGAACCAACAGTTCTGCTACTGTTTTGGGACTGTATTTAGTTAAAATAAGAACAGGTGAACCAGACGAGCGTATAGCTTCTATGTTTAATATGTCGAGAAGAACATTGGAACGAAAACTAAAAATAGCTCGAGAATGTTTATCTGAAGAGTTTGTTCCCCGCCATCTGGGTTTGGATCACATGACGAGAGAAGATGTAGTAGCTCGCAACTTAACCATCCCGAGTCATATTTTTGGAGGTAACCAGAATGAACCTGCGGCCATTCTTGTGTGTGATGGAACATACATATACGTGCAAAAAAGCTCCAACTTCCTTTTTCAGAGAAGAACGTATAGCCTGCACAAATTCCGCAACTTAATAAAACCCTTTTTAATTGTATGCACAGACGGCTATATTGTAGACGTATTAGGCCCGTATCCAGCTATTACTACGGATGCCGAAATAATGCGTCACATGATGGAGGAGGAAGTTTGGTATTGGTTTCTGAACGCCAACGATATTTTCATATTGGACCGCGGCTTTAGAGACTCTATCCCTGCCATCGAAGAGCATGGATATGATGCACATATGCCGCCAACAAGGACGAGAGGAGAGCAGTTGAGCACAGTAGATGCAAATAAATCACGTCTAATCACTATGTGTCGTTGGGTGGTAGAGACTATTAATGGTCGCTTTAAAAAAGACTTCAAAATATTCCGCCATGTTTATTTTAATGTAGCGCTTACAAATATGATGACTGATTTTAAAATAACTGCAGCACTTATCAATGCCACTTATCAGCCATATAGAGATAACGCTCATGCCGCAGAGTTTATAAATATAATAAATGAGAATATAAATAGAGAAAATGAATTGGCTGATTACGTGATTCGAAACAACTTAAACAGGCAAAGAGTTGCATTCACGCCGATAGAGGCAAACAATCCCGAATTAAGAGATTTTCCACAATTAACTTACGACGAGCTATTTTTATTTACCTTGGGAATATACCATTTGAAATTGGCCAAATCTTATTGCCATGAACACATGCGGCCAAACGGAGTGTATATAATGGAATTATACCATCGCAGAGAGTTGGTAGAAAATAAAATATTAATACGAGGCAGAATACAGTCTCGTCACATAAGAGCAAAACGCTATTATACATATATACTAATAAATCCGGCATTGCAAGGAAGACAAAGCCTCGAAGGGTATTACTGTTCCTGTATACACGGCCGCCGCACTGTAGGGAGTTGCGCGCACATCGCCAGTGTGGTATACTTTTTATCTTGGGCTATATATCAAGAAGAATTCCACGCACCTGCGGCGTTTTTAGACGAAACTCTTGTAGATTTGGATGCGGCAGAATAA

Protein

MFLERYHDYAVLLLQEIMPREIAFDGTLSICNPCWLRFYRAVQVRPVDDPLPQQVQEPLPQQVQEEEVQEIVVDVQQQQDIGLMTIPGYLRVSNTARRCVFQNCRNVPANAVPKYVRLHFFRINKLFIPKLARVCQPHMINNEWEDLLNEQIPLHENFNSAHVLDIIELYEWRLERGTQLDFENVEEIDDNELHFYTGMDKIQFNNILNQTSSLRDRTNSSATVLGLYLVKIRTGEPDERIASMFNMSRRTLERKLKIARECLSEEFVPRHLGLDHMTREDVVARNLTIPSHIFGGNQNEPAAILVCDGTYIYVQKSSNFLFQRRTYSLHKFRNLIKPFLIVCTDGYIVDVLGPYPAITTDAEIMRHMMEEEVWYWFLNANDIFILDRGFRDSIPAIEEHGYDAHMPPTRTRGEQLSTVDANKSRLITMCRWVVETINGRFKKDFKIFRHVYFNVALTNMMTDFKITAALINATYQPYRDNAHAAEFINIINENINRENELADYVIRNNLNRQRVAFTPIEANNPELRDFPQLTYDELFLFTLGIYHLKLAKSYCHEHMRPNGVYIMELYHRRELVENKILIRGRIQSRHIRAKRYYTYILINPALQGRQSLEGYYCSCIHGRRTVGSCAHIASVVYFLSWAIYQEEFHAPAAFLDETLVDLDAAE

Uniprot

A0A437B6D3   A0A2H1VII7   A0A437BC39   A0A0L7L764   A0A3S2NPD3   A0A437B507   + More
A0A3S2N7G6   A0A3S2TCN2   A0A3S2NDA8   A0A3S2N2Q8   A0A3S2LCU6   A0A3S2TPM0   T1KUD9   A0A0J7K283   A0A210QLI8   K1S6H7   K1Q294   T1KG68   A0A0J7K2D6   E9IMK8   A0A226DUC6   A0A226DVP3   A0A226CY25   A0A226EGQ1   A0A226DMI5   A0A226DCY6   A0A226DTW4   A0A2H9T4U9   A0A1Y3B9H9   E9IXW4   A0A226D761   A0A151IXK0   A0A226F628   A0A0J7K318   A0A151J616   A0A226DFB5   A0A226CXD9   A0A226DNV0   A0A226D383   A0A226D0Y5   A0A0J7K2V7   A0A0J7K386   A0A226D033   A0A226E346   A0A226EDG3   A0A151JCH8   A0A226E9T2   A0A226DL71   A0A3M7R806   A0A226DLI5  

Pubmed

26227816    28812685    22992520    21282665    29150518    30375419    + More

EMBL

RSAL01000140    RVE46076.1    ODYU01002734    SOQ40606.1    RSAL01000093    RVE47928.1    + More
JTDY01002487    KOB71318.1    RSAL01000866    RVE41092.1    RSAL01000165    RVE45293.1    RSAL01003132    RVE40334.1    RSAL01000368    RVE42169.1    RSAL01000197    RVE44543.1    RSAL01005980    RVE39951.1    RSAL01000041    RVE50885.1    RSAL01000030    RVE51723.1    CAEY01000555    LBMM01016502    KMQ84404.1    NEDP02003062    OWF49584.1    JH817349    EKC43026.1    JH819060    EKC25484.1    CAEY01000034    LBMM01016052    KMQ84578.1    GL764207    EFZ18186.1    LNIX01000011    OXA49105.1    OXA49108.1    LNIX01000051    OXA37889.1    LNIX01000004    OXA56264.1    LNIX01000016    OXA46064.1    LNIX01000024    OXA42990.1    OXA48649.1    NSIT01000223    PJE78236.1    MUJZ01037002    OTF76533.1    GL766791    EFZ14590.1    LNIX01000032    OXA40694.1    KQ980825    KYN12427.1    LNIX01000001    OXA64651.1    LBMM01015392    KMQ84828.1    KQ979900    KYN18648.1    LNIX01000021    OXA43544.1    LNIX01000049    OXA37995.1    LNIX01000014    OXA46688.1    LNIX01000044    OXA38716.1    OXA38710.1    LBMM01015534    KMQ84768.1    LBMM01015464    KMQ84797.1    LNIX01000045    OXA38533.1    LNIX01000007    OXA52003.1    OXA55460.1    KQ979038    KYN23462.1    LNIX01000005    OXA54303.1    LNIX01000017    OXA45584.1    REGN01003993    RNA19707.1    LNIX01000015    OXA46405.1   

Proteomes

UP000283053    UP000037510    UP000015104    UP000036403    UP000242188    UP000005408    + More
UP000198287    UP000078492    UP000276133   

Pfam

PF13359   DDE_Tnp_4        + More
PF13613   HTH_Tnp_4
PF13843   DDE_Tnp_1_7
PF13855   LRR_8

Interpro

IPR027806   HARBI1_dom        + More
IPR007527   Znf_SWIM       
IPR029526   PGBD       
IPR027805   Transposase_HTH_dom       
IPR026847   VPS13       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A437B6D3   A0A2H1VII7   A0A437BC39   A0A0L7L764   A0A3S2NPD3   A0A437B507   + More
A0A3S2N7G6   A0A3S2TCN2   A0A3S2NDA8   A0A3S2N2Q8   A0A3S2LCU6   A0A3S2TPM0   T1KUD9   A0A0J7K283   A0A210QLI8   K1S6H7   K1Q294   T1KG68   A0A0J7K2D6   E9IMK8   A0A226DUC6   A0A226DVP3   A0A226CY25   A0A226EGQ1   A0A226DMI5   A0A226DCY6   A0A226DTW4   A0A2H9T4U9   A0A1Y3B9H9   E9IXW4   A0A226D761   A0A151IXK0   A0A226F628   A0A0J7K318   A0A151J616   A0A226DFB5   A0A226CXD9   A0A226DNV0   A0A226D383   A0A226D0Y5   A0A0J7K2V7   A0A0J7K386   A0A226D033   A0A226E346   A0A226EDG3   A0A151JCH8   A0A226E9T2   A0A226DL71   A0A3M7R806   A0A226DLI5  

KEGG

105842699    no KO assigned | (RefSeq) uncharacterized LOC105842699

GO

GO:0008270   GO:0005488   GO:0016791   GO:0005515   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR16166  

Length:

666

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.60699

Exp number, first 60 AAs:

0.00118

Total prob of N-in:

0.00283

outside

1  -  666

 

 

Pi

220.998066

Theta

45.599467

Tajima's D

1.575439

CLR

0.090971

CSRT

0.806159692015399

Interpretation

Uncertain