SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08148
Pre Gene Modal
BGIBMGA001083
Annotation
PREDICTED:_palmitoyltransferase_ZDHHC17-like_[Papilio_machaon]
Full name
Palmitoyltransferase       + More
Palmitoyltransferase Hip14      
Alternative Name
Huntingtin-interacting protein 14 homolog
Location in the cell
PlasmaMembrane   Reliability : 4.023
 

Sequence

CDS
ATGATGTACGACAGTACTTGTGGTGCAGCGGCGACTGGCCAGTGTGGCCCTGCGCAGGCTGAACGAGAACCTCCAGAACCGCGGGAACCTCCACCACCACCAACTGAACGAGATTACAGCGGCTACGATATCGTGAAAGCAACGCAGTACGGAGCATTTGTGCGCGTTAAAGAACTCGTCGAAGCTGGCTGGGACGTGAACCGACCCGACGGCGAAACGGTGACCTTGCTGCACTGGGCTGCAATCAACAACAGACGCGACATCATCCAGTACTTGCTGTCGAAGGGTGCGAATGTCGATGCAGTTGGGGGAGAGTTACAGTCGACACCGCTACACTGGGCGACGCGGCAAGGGCACCTGGACGCGACTGTGCTGCTGGTCCGCGCGGGAGCCGACCCTTCGCTGCGTGACGCCGAGGGCTGCGCGTGCCTACACCTGGCAGCACAATTCGGTCACACTGCTGTGGTGGCGTACCTAGTGGCACGAGGTGTGACTGTGGATGAACCTGATGCAGGTGGCATGACGGCGCTCATGTGGGCAAGCTGGAAGGTTGCAGCTGTGGACCCAACACGTTTACTCCTCACTTTAGGTGCATCAACACAACCAGCTGATCGTGGCCATGGTAACACAGCCCTGCACTGGGCTATTCTGGCACGTAACACTACGGCCATATCCACTCTGATACTTTATGGTGATGCTAATTTGGATGTACCCAACCTGCGAGGAGTGACTCCATTGCAGATGTTACAGGCGAGTGCTGATTCCTTATGGGTTGGCTCTAAAGTTTCAGACAAAATAAAGGAACGTACAATGGAGTCAGAAAGATTATCAATATTTAGAAGATTGACATATGACAAGAAATTCAGATGGTGGTGTGTGGTAGTAATGCCATTCATGGCATTCTACTTGACTGGCCTCATCCTGGAGACGGACTTGAACTATCCTCTAAAAACCTTAATCTTGATTGGTTTCTACTCACTTTTACATTTTACTAGTAACTTGTTATTTGATGATGAACTCAAAAACATATTTCCCCTGAGTATATATCTCGCAACCAAGGTGTGGTTCTACATAACGTGGGTGGTGTTTATCCTTCCGGTGGTGGGGTGGAGCTGGTCTCTGGGGTTCGCAGTTTGCTCGGGGTTGCTGTGGGTGACATTCCTGCGCTCGTGGCGTTCCGATCCTGGCGTCATTACAGCTTCCAAAGCTGACAAGTTCAGGACGATCATCGAGCTGTCGGAGGCGGCGGGCGGCGGGTTCGAGTCGTCGCGGTTCTGCTCGGCGTGCCTGGTGCGGCGCCCGCTGCGGTCCAAGCACTGCGCCGTGTGCAACCGCTGCGTCGCCAAGTTCGACCACCACTGTCCCTGGGTCGGCAACTGCATCGGCGCCAACAACCACCGCCACTTCATCGGCTTCCTGTGCAGCCTCATCCTCATGTGCTGCTGGATGCTGTGGGGCGGCGCGCGCTACCTGCGCGACCAGTGCCCCGCGCCCGCCGAGCCGCTCGCCTGGGTCTCCTGCAACGGCTGGATCTCGTGGGTGATGCTCAATGCCGCGTTCCACCTGTTCTGGGTGACGGTGCTCACCGGCTTCCAGATGTACCTGGTGGTGTGCCTCGGCATGACCACCAACGAGCAGCTGAACCGCGGCCGCTACAAGCACTTCCAGGCGCGCGGCGGCCGCTCGCCCTTCAGCCGCGGCCCGCTCGCCAACTGCTTGGAGCTGCTCGGCTGCCGGTCGCCCCGGGACCACGCCGACCTGGACCACGGCGTGTGA
Protein
MMYDSTCGAAATGQCGPAQAEREPPEPREPPPPPTERDYSGYDIVKATQYGAFVRVKELVEAGWDVNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDAVGGELQSTPLHWATRQGHLDATVLLVRAGADPSLRDAEGCACLHLAAQFGHTAVVAYLVARGVTVDEPDAGGMTALMWASWKVAAVDPTRLLLTLGASTQPADRGHGNTALHWAILARNTTAISTLILYGDANLDVPNLRGVTPLQMLQASADSLWVGSKVSDKIKERTMESERLSIFRRLTYDKKFRWWCVVVMPFMAFYLTGLILETDLNYPLKTLILIGFYSLLHFTSNLLFDDELKNIFPLSIYLATKVWFYITWVVFILPVVGWSWSLGFAVCSGLLWVTFLRSWRSDPGVITASKADKFRTIIELSEAAGGGFESSRFCSACLVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCIGANNHRHFIGFLCSLILMCCWMLWGGARYLRDQCPAPAEPLAWVSCNGWISWVMLNAAFHLFWVTVLTGFQMYLVVCLGMTTNEQLNRGRYKHFQARGGRSPFSRGPLANCLELLGCRSPRDHADLDHGV

Summary

Description
Probable palmitoyltransferase which is required for photoreceptor synaptic transmission and for the correct expression and localization of palmitoylated protein Csp and synaptosomal-associated protein Snap25 (PubMed:18158335, PubMed:18032660). Probably palmitoylates Csp (PubMed:18158335). Probably also palmitoylates the dorsal-ventral patterning protein Sog and promotes its secretion and activity and the stabilization of the membrane-bound form (PubMed:20599894). Required for synaptic vesicle exocytosis (PubMed:18158335).
Catalytic Activity
hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein]
Subunit
Interacts with dorsal-ventral patterning protein Sog.
Similarity
Belongs to the DHHC palmitoyltransferase family.
Belongs to the DHHC palmitoyltransferase family. AKR/ZDHHC17 subfamily.
Keywords
Acyltransferase   ANK repeat   Cell junction   Cell membrane   Complete proteome   Golgi apparatus   Lipoprotein   Membrane   Palmitate   Reference proteome   Repeat   Synapse   Transferase   Transmembrane   Transmembrane helix  
Feature
chain  Palmitoyltransferase Hip14
EC Number
2.3.1.225
EMBL
BABH01000003    ODYU01003924    SOQ43287.1    NWSH01001493    PCG71089.1    KQ460297    + More
KPJ16263.1    KZ150387    PZC71058.1    KQ459439    KPJ01096.1    GGFK01009227    MBW42548.1    ADMH02001696    ETN61393.1    AXCN02001661    AXCM01000779    ATLV01013376    KE524854    KFB37834.1    GFDL01003407    JAV31638.1    GFDL01003402    JAV31643.1    JXUM01044388    KQ561398    KXJ78710.1    AAAB01008986    EAA00049.3    UFQS01000115    UFQT01000115    SSW99922.1    SSX20302.1    CH964168    EDW80166.2    AE014296    AGB94603.1    AY094779    AAM11132.1    JXJN01010285    CH379070    EAL30521.2    CH479219    EDW34723.1    GAMC01007900    JAB98655.1    CH891734    EDW99818.2    CH902618    EDV40130.2    CH954178    EDV52184.2    GAKP01019189    JAC39763.1    CM000363    CM002912    EDX10623.1    KMY99892.1    CCAG010022451    CH933809    EDW18789.2    GDHF01028232    JAI24082.1    GDHF01032179    JAI20135.1    GDHF01021759    JAI30555.1    CH916366    EDV97269.1    CP012525    ALC44789.1    OUUW01000002    SPP76797.1    CH940647    EDW70040.2    JRES01000005    KNC34955.1    KA648324    AFP62953.1    AJWK01003138    AJVK01029539    GFDF01002750    JAV11334.1    APCN01002385    KQ971339    EFA01463.1    CVRI01000074    CRL08133.1    GEZM01086196    JAV59681.1    NEVH01016301    PNF25878.1    DS235842    EEB18248.1    APGK01017930    APGK01017931    APGK01017932    KB740060    ENN81782.1    GEDC01019481    JAS17817.1    KB632433    ERL95568.1    KK852729    KDR17567.1    GGFK01010083    MBW43404.1    CVRI01000047    CRK98524.1    KQ434772    KZC03869.1    ACPB03005829    ACPB03005830    GBHO01010557    JAG33047.1    GBBI01003350    JAC15362.1    PYGN01000117    PSN53756.1    QCYY01002305    ROT71356.1    KQ435746    KOX76561.1    GL438128    EFN69553.1    GL450325    EFN81171.1    KQ414648    KOC66289.1    KZ288219    PBC32315.1    KK107519    EZA49450.1    NNAY01002550    OXU21075.1    KQ982769    KYQ50878.1    KQ761502    OAD57473.1    KQ976401    KYM92594.1    KQ981335    KYN42635.1    QOIP01000009    RLU18497.1    KQ978023    KYM97942.1    IACF01003631    LAB69242.1    ADTU01026871    GL888182    EGI65737.1   
Pfam
PF01529   DHHC        + More
PF12796   Ank_2
PF00023   Ank
PF03647   Tmemb_14
Interpro
IPR020683   Ankyrin_rpt-contain_dom        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR030289   ZDHHC17       
IPR002110   Ankyrin_rpt       
IPR001594   Palmitoyltrfase_DHHC       
IPR005349   TMEM14       
SUPFAM
SSF48403   SSF48403       
Gene 3D
PDB
5W7I     E-value=6.15963e-75,     Score=716

Ontologies

Topology

Subcellular location
Golgi apparatus membrane   Localizes to the Golgi apparatus in non-neuronal cells and located primarily in presynaptic terminals in neurons.   With evidence from 5 publications.
Cell junction   Localizes to the Golgi apparatus in non-neuronal cells and located primarily in presynaptic terminals in neurons.   With evidence from 5 publications.
Synapse   Localizes to the Golgi apparatus in non-neuronal cells and located primarily in presynaptic terminals in neurons.   With evidence from 5 publications.
Presynaptic cell membrane   Localizes to the Golgi apparatus in non-neuronal cells and located primarily in presynaptic terminals in neurons.   With evidence from 5 publications.
Length:
591
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
126.16845
Exp number, first 60 AAs:
0
Total prob of N-in:
0.98083
inside
1  -  289
TMhelix
290  -  308
outside
309  -  317
TMhelix
318  -  336
inside
337  -  342
TMhelix
343  -  365
outside
366  -  368
TMhelix
369  -  388
inside
389  -  468
TMhelix
469  -  491
outside
492  -  517
TMhelix
518  -  540
inside
541  -  591
 
 

Population Genetic Test Statistics

Pi
5.053229
Theta
6.595845
Tajima's D
-1.084509
CLR
0.101596
CSRT
0.11704414779261
Interpretation
Uncertain
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