SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08134
Pre Gene Modal
BGIBMGA001074
Annotation
PREDICTED:_probable_phospholipid-transporting_ATPase_IA_isoform_X1_[Bombyx_mori]
Full name
Phospholipid-transporting ATPase      
Location in the cell
PlasmaMembrane   Reliability : 4.729
 

Sequence

CDS
ATGGGTCTAAACGATGTCGACATGGCGTTAGCTTTGAGAGAGTACGTGGTGAGCTTCTTGCAGGAGCACAACATTATGGCGCCTTTCTCCAGGTTCTATAGGGCCATGGTGCTCAAAATGAACCAGCATGAAGATGAAGCAACTACGTCAGGTATCACCGACGGTGCCACATCCGATCAGCAAAACCGTGTCATTTTCGTCAACAGACCGCAGCCCCAGAAGTTCGTCTCGAACAGGATCTCTACTGCTAAATACAGCGTGCCGTCCTTCGTTCCCTTATTCCTGTTCGAGCAGTTCCGTCGGTATTCCAACTGCTTCTTCCTGTTGATAGCCCTGCTGCAGCAGATCCCTGACGTGTCGCCGACGGGACGGTGGACAACCCTCACTCCTCTCATACTCATACTGAGCGTTAGCGCCATCAAGGAGATTGTTGAAGATTTTAAGCGGCACCGAGCGGACGACGAGACCAACCGCAGGCTGGTGGAGGTGCTGCGGGAGCGGCGCTGGGTCGCCATACGATGGGAGCATCTACAGATCGGCGACATCTGCAAAGTGCTCAACAACCAGTTCTTCCCAGCCGACCTGGTGCTGCTGGCCTCTAGCGAGCCCCAGGGCATATCCTTCATAGAGACCAGCAACCTGGACGGAGAGACCAACCTGAAGATCCGGCAGGCGCAGCCCGACACGGCCCGCCTGGACGCCGCCCCCGCCCTGGCGGACTTCCGCGCCACCGTGCAGTGCGAGCCGCCCAACCGACATCTATACGAATTCAATGGATTGCTAAAGGAGGCCAATGTCAAGACGCTGCCTCTGGGCTTGGACCAGATGCTCCTCCGGGGGGCGATGCTGCGGAACACGGCCTGGGTGCACGGCGTGGTGGTGTACACGGGACACGAAACTAAACTCATGAAGAATTCTACTAAAGCCCCGTTGAAGCGCTCATCGATCGACCGCCAGACCAACACCCACATCTTGATGCTGTTCATCATCCTCCTGGCGCTGTCGCTGCTCAGCGCCGGCTTCAACGAGTTCTGGATGCGGAACCACAATGACTGGTATATCGGCCTCGAAGAGGCGCAGAACGCGCACTTCGGGTTCAACTTCCTGACGTTCCTGATCCTGTACAACAACCTCATACCGATATCGCTGCAGGTCACCGCCGAGATAGTTCGCTTCTTCCAGGCCAAGTTCATCTCCATGGACAGCGAGATGTACGACCCGGCCAGCGACACGGCGGCCATGGCGCGGACCTCCAACCTCAACGAGGAGCTGGGCATGGTGCGCTACGTGTTCAGCGACAAGACCGGCACCCTCACGCAGAACGTCATGGTCTTCCACAAGTGCACCATCGCAGAGGTGATCTACAGCCGGCCGGGGCCCACGGAGCGGCTGGAGGACACGCCGCTGTACCAGAACCTGACGCGGGAGCACCCCACGGCGCCCGTCATCCGCGAGTTCCTCATCATGCTGGCCATCTGCCACACCGTCATCCCCGAGACCAAGGGGGACACCGTGGACTACCACGCCGCTTCCCCCGACGAGCGCGCGCTGGTGACGGGCGCCGCGGCCTTCGGCTTCTCGTTCTGCACGCGCACGCCCAGCCACGTGCACGTGCGCGCGCTGGGGGACACGCTGCGCTACCAGCTGCTGCACGTGCTCGACTTCACCTCCGCCAGGAAGCGCATGTCCGTCATCGTGCGCACGCCGGAAGGGACCATCAAGCTGTACTGCAAGGGCGCGGACAGCGTGATCTACAGCCGGCTGTCCGGCGGAGACAGCGCGCCCTTCGCGGCGGCCACCCTGGCGCACCTGGAGCACTTCGCCGCGGAGGGGCTCCGGACCCTCGTGTTCGCCGTCGCCGACATCCCCGAGCAGGTCTACCAGGACTGGTCCAACACCTACCACAAGGCGAGCATCGCGATACAGGACCGCGAGCAGAAGATCGAGGAAGCTGCCGATCTCGTAGAGAACAACCTGAGGCTGCTCGGAGCCACTGCCATTGAAGACAAGCTGCAGGACGGCGTGCCGGAGACCATCGCCGCGCTCCTGAAGGCCAACATCAACGTGTGGGTGCTCACGGGAGACAAGCAGGAGACCGCCATCAACATCGCGCACTCCGCGCGGCTCATCCACACCGCCATGCCGCTGCTCATACTCAACGAGGACAGCCTCGACGGCACCCGGGAGTCCATGTCGCGCCACGCCATAGACTTCGGAGACAACCTCCGGAAGCAGAACGACGTGGCGCTCGTCATCGACGGAAAGAGCCTCAAGTACGCGATGGGCTGCGACCTGAAGAAGGACTTCCTGGACCTGTGCATATCCTGCAAGGTGGTGGTGTGCTGCAGGGTGTCGCCCATACAGAAGGCCGAGGTGGTGGAGCTGGTGTCGGGCGCCACGGGGGCGGTGACGCTGGCCATCGGCGACGGAGCCAACGACGTGGCCATGATCCAGCGCGCGTCCGTCGGCGTCGGCATCTCCGGCGTCGAGGGGCTGCAGGCCGTCTGCGCCTCCGACTACAGCATCGCGCAGTTCCGTTTCCTGCTCCGCCTGCTGCTGGTGCACGGAGCCTGGAACTACTCGCGAATCAGCAAACTCATTCTGTATTCATTCTACAAAAACATCTGTCTGTACGTCATCGAACTGTGGTTCGCCATATACTCTGCTTGGTCGGGGCAGATCCTGTTCGAGCGGTGGACCATCGGCTTCTACAACGTTATCTTCACTGCGCTGCCACCCTTCGCCATCGGACTCTTCGACAAGCTGTGCTCACCGGAGATCATGCTCAGGCACCCCATCCTGTACATCCCGTCGCAACAAGGGCTGCTGTTCAACGTGCGCGTGTTCTGGGTGTGGGCGGTCAACGCGCTGCTGCACTCCGTGCTGCTGTTCTGGCTGCCCGTGGCGCTCGCCGACCACCACGTGCTGTGGTCCTCGGGCAAGGACGGCGGCTACCTGGTGCTGGGGAACCTGGTCTACACCTACGTGGTTCTGACCGTGTGTCTCAAAGCCGGGCTGGCCACGCACTCGTGGACGTGGGTCACGCACGTCTCCATATGGGGGTCCTTAGCTCTTTGGCTGCTATTCTTACTTATATACAGTAACATATACCCAACGATTCTGATCGGAGCCGTGATGCTGGGCATGGACCGGATGGTGTTCGGCTCCCTGGTCTTCTGGTTCGGCCTCATCCTCATCCCGATAGCGACCCTCATACCGGACCTCGTCGTCACCGTCGTGCGCAACTCCGCCTTCAAATCCGCCACCGAGGCCGTGCGGGAGAGCGAGCTGAAGCAGCGCGCGCCGCCCGCCCTGCTGGCCCAGCCGCGACACTCCCTCACGGAGACGGCGCGGCTGCTGCAGAACGTTCGCAGCGTGTTCACTCGGCGCTCCACCTCGCGGGCCGCCGTCGAGCTAGAGCTCTCGCATGGATTCGCTTTCTCGCAAGAGGAGGGCGGGAGTGTGTCCCAGGCGGACGTGGTCCGAGTGTACGACACAAGGCAGCCGAGACCGGAGCACTCTTGA
Protein
MGLNDVDMALALREYVVSFLQEHNIMAPFSRFYRAMVLKMNQHEDEATTSGITDGATSDQQNRVIFVNRPQPQKFVSNRISTAKYSVPSFVPLFLFEQFRRYSNCFFLLIALLQQIPDVSPTGRWTTLTPLILILSVSAIKEIVEDFKRHRADDETNRRLVEVLRERRWVAIRWEHLQIGDICKVLNNQFFPADLVLLASSEPQGISFIETSNLDGETNLKIRQAQPDTARLDAAPALADFRATVQCEPPNRHLYEFNGLLKEANVKTLPLGLDQMLLRGAMLRNTAWVHGVVVYTGHETKLMKNSTKAPLKRSSIDRQTNTHILMLFIILLALSLLSAGFNEFWMRNHNDWYIGLEEAQNAHFGFNFLTFLILYNNLIPISLQVTAEIVRFFQAKFISMDSEMYDPASDTAAMARTSNLNEELGMVRYVFSDKTGTLTQNVMVFHKCTIAEVIYSRPGPTERLEDTPLYQNLTREHPTAPVIREFLIMLAICHTVIPETKGDTVDYHAASPDERALVTGAAAFGFSFCTRTPSHVHVRALGDTLRYQLLHVLDFTSARKRMSVIVRTPEGTIKLYCKGADSVIYSRLSGGDSAPFAAATLAHLEHFAAEGLRTLVFAVADIPEQVYQDWSNTYHKASIAIQDREQKIEEAADLVENNLRLLGATAIEDKLQDGVPETIAALLKANINVWVLTGDKQETAINIAHSARLIHTAMPLLILNEDSLDGTRESMSRHAIDFGDNLRKQNDVALVIDGKSLKYAMGCDLKKDFLDLCISCKVVVCCRVSPIQKAEVVELVSGATGAVTLAIGDGANDVAMIQRASVGVGISGVEGLQAVCASDYSIAQFRFLLRLLLVHGAWNYSRISKLILYSFYKNICLYVIELWFAIYSAWSGQILFERWTIGFYNVIFTALPPFAIGLFDKLCSPEIMLRHPILYIPSQQGLLFNVRVFWVWAVNALLHSVLLFWLPVALADHHVLWSSGKDGGYLVLGNLVYTYVVLTVCLKAGLATHSWTWVTHVSIWGSLALWLLFLLIYSNIYPTILIGAVMLGMDRMVFGSLVFWFGLILIPIATLIPDLVVTVVRNSAFKSATEAVRESELKQRAPPALLAQPRHSLTETARLLQNVRSVFTRRSTSRAAVELELSHGFAFSQEEGGSVSQADVVRVYDTRQPRPEHS

Summary

Catalytic Activity
ATP + H(2)O + phospholipid(Side 1) = ADP + phosphate + phospholipid(Side 2).
Similarity
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
Feature
chain  Phospholipid-transporting ATPase
EC Number
7.6.2.1
EMBL
BABH01000052    BABH01000053    BABH01000054    KQ460297    KPJ16245.1    AGBW02012175    + More
OWR45528.1    GFDF01009182    JAV04902.1    GANO01001371    JAB58500.1    GFDL01000645    JAV34400.1    GFDL01000655    JAV34390.1    KK852570    KDR21171.1    JRES01001289    KNC23912.1    GFDF01009379    JAV04705.1    CH477201    EAT48160.1    UFQT01000781    SSX27181.1    SSX27182.1    CCAG010015909    JXJN01015380    CM000071    ENO01787.1    OUUW01000001    SPP73870.1    CH933808    EDW09620.2    GAMC01019295    GAMC01019291    JAB87264.1    GAMC01019293    GAMC01019292    JAB87263.1    GDHF01017999    JAI34315.1    GDHF01011677    JAI40637.1    GAKP01022156    GAKP01022155    JAC36797.1    KQ971338    EFA02157.2    CH954179    KQS62750.1    KRG04764.1    CH902619    KPU77080.1    KQS62748.1    KQS62746.1    KPU77083.1    CM000158    KRJ99335.1    KQS62745.1    KQS62743.1    KRJ99336.1    AY069236    AE013599    AAL39381.1    AAM68573.1    CM002911    KMY93480.1    KRJ99342.1    GEZM01034879    JAV83567.1    KMY93482.1    GEZM01034880    GEZM01034874    JAV83573.1    CH940648    KRF79266.1    QOIP01000012    RLU15759.1    ACL83103.1    KK107353    EZA52084.1    KMY93484.1    ACL83109.1    KRT02810.1    KQ979471    KYN21420.1    SSX27180.1    CH963719    EDW72056.2    SSX27179.1    GL436526    EFN71801.1    KQ977720    KYN00428.1    GDHF01012252    JAI40062.1    GDHF01021961    JAI30353.1    GFDL01000662    JAV34383.1    KQ976587    KYM79719.1    KQ435794    KOX73593.1    GGFM01006716    MBW27467.1    GFDL01000661    JAV34384.1    JR036186    AEY56983.1    GL888207    EGI65000.1    JR036187    AEY56984.1    KYB27799.1    KQ982944    KYQ48851.1    KZ288192    PBC34339.1    KQ766603    OAD53651.1    GGFJ01001182    MBW50323.1    KRG04767.1    KB632308    ERL91978.1    GGFJ01001085    MBW50226.1    GGFL01004978    MBW69156.1    KQS62751.1    EAT48161.1    GGFK01003305    MBW36626.1    KQ434827    KZC07665.1    GBYB01011958    JAG81725.1    KQS62747.1    GEZM01034876    JAV83570.1    KRJ99340.1    BT100313    ACZ52625.1   
Pfam
PF16212   PhoLip_ATPase_C        + More
PF16209   PhoLip_ATPase_N
Interpro
IPR023214   HAD_sf        + More
IPR036412   HAD-like_sf       
IPR032631   P-type_ATPase_N       
IPR006539   P-type_ATPase_IV       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR001757   P_typ_ATPase       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR018303   ATPase_P-typ_P_site       
IPR032630   P_typ_ATPase_c       
SUPFAM
SSF81660   SSF81660        + More
SSF81665   SSF81665       
SSF56784   SSF56784       
SSF81653   SSF81653       
Gene 3D
PDB
6A69     E-value=2.6922e-14,     Score=196

Ontologies

Topology

Subcellular location
Membrane  
Length:
1174
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
185.15398
Exp number, first 60 AAs:
0.14565
Total prob of N-in:
0.13682
outside
1  -  322
TMhelix
323  -  345
inside
346  -  364
TMhelix
365  -  387
outside
388  -  841
TMhelix
842  -  861
inside
862  -  867
TMhelix
868  -  890
outside
891  -  899
TMhelix
900  -  919
inside
920  -  947
TMhelix
948  -  970
outside
971  -  984
TMhelix
985  -  1007
inside
1008  -  1019
TMhelix
1020  -  1042
outside
1043  -  1056
TMhelix
1057  -  1079
inside
1080  -  1174
 
 

Population Genetic Test Statistics

Pi
15.938211
Theta
17.907273
Tajima's D
-0.853523
CLR
1.029669
CSRT
0.16289185540723
Interpretation
Uncertain
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