Silkworm Genome Informatics Database

Gene

KWMTBOMO08132

Pre Gene Modal

BGIBMGA001071

Annotation

Ankyrin_repeat_and_BTB/POZ_domain-containing_protein_2_[Operophtera_brumata]

Location

Bomo_Chr13(+):17228081-17229571 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.227

CDS

ATGCTGTGCCCCGCGCGCTGCTCGTGCTTCCTCTGTCGCGAGCTGCAGTCTTGCAGGGCCGCCGACGCAAGGAAACCTCCAAATAAACATAACATGAGCGACAACTTCATTCTCAAAAAGGCCGAAGCATGGGAGCCGATGAAGTTCATTCGTGGTGCGGCCAGACTCTCAGTCAGGCACTGGCAGAGCAGGGAGCCACTCAACTCGACAAAGACGAGGATGGCCACTCACAAGTCGACCAGCTGTGAGCAGCTGTACCCTCACCCTAGCGAGGAGCAGGCGGGGCCGTTTGGGATGCGGCGCGCCCCGAGCACTGATCGTGTCAAGCAAACTGATCATAAGCCATTATTTAAGATATTAGGGAACTCGCGGCTCAAGAAAGTTAACAGTACCGACGCCGCCGAATCTAAAGTGCGACGTAGCGTTTTGAATTTTAGAAAAAACGAGACTCCCAATCCCAGCAACGTTCATGAGAAATATCTGCCTTTACCACAAATGTCAGCATCAACAGAGCATGTTTACAGTGAGCCTAGACCGTGGAACTCACAACCACAGTACGACGACTGCTGCCGTCCACCAGTGTACCAGAGTGTCGAAAAGAAACGAGAAGAGAACAAGGTGACTAACTCTGAAAAGAAAAACATGCTCACCAACCGTCTTCCGTGCTACGAAGAATTAGCACAAAAGATATCGCAAGAGAAAAATAAGAAGCCAAACTTACCACTAACTGAAGCTGGCCTAGCTAACAAAATAACGCAAAACAATAACAAAGTAGTTATTTATTTCGGCGATTCTATTATAAGGAAACACAACGAACAGAAGAGAGAGGAGAAGCTTAAAGAAGAAAATCAAAAGCCAGAAGCCATATACGTCAACAGGTTTGTAAACGAGACTGAGACTATTGGACTGGATAATTTCATTTATAAAGCAGACGAATGTCCAACACCAGAAATTCATGTATCGGAAGCTATATATTCAGAAATAAAATATGAAGACCCTATAGACGACGTAGTGACGATCAATGATGCAACGTACAGAAAAGATGTGTTTGGGACCATCAGTTCTGATGGTTTTTTGGTTGTCGAATTTGAAGAAAACTTCGAAAGGGCTCGACAACTAGTCGAATTGGTGCACGGGGGATCTAGTGAACACCATGAAGCGACAGTTCTTGATGATGAAGAGCCTTGCGATTGGAGCTTCGTTCAAGAATGGAGAAAAAGGTACTTTTTAAGAACCAAATGTAATTTTTTTAAAACATTTCAATTTGAAATACGAAATATTACTATAAGAAAACGATTTCAATCGTCTGGCTGA

Protein

MLCPARCSCFLCRELQSCRAADARKPPNKHNMSDNFILKKAEAWEPMKFIRGAARLSVRHWQSREPLNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTDHKPLFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPWNSQPQYDDCCRPPVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEENQKPEAIYVNRFVNETETIGLDNFIYKADECPTPEIHVSEAIYSEIKYEDPIDDVVTINDATYRKDVFGTISSDGFLVVEFEENFERARQLVELVHGGSSEHHEATVLDDEEPCDWSFVQEWRKRYFLRTKCNFFKTFQFEIRNITIRKRFQSSG

Uniprot

H9IUZ1 A0A2W1BVF0 A0A2A4J9A9 A0A0L7L5G8 A0A194QC93 A0A194RJW4 + More
A0A2H1X2F2 A0A3S2NLH9 A0A212EVK5

Pubmed

19121390 28756777 26227816 26354079 22118469

EMBL

BABH01000060 KZ149891 PZC79062.1 NWSH01002411 PCG68346.1 JTDY01002781 + More
KOB70743.1 KQ459439 KPJ01056.1 KQ460297 KPJ16241.1 ODYU01012481 SOQ58814.1 RSAL01000294 RVE42850.1 AGBW02012175 OWR45530.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053268 UP000053240 UP000283053 + More
UP000007151

PRIDE

H9IUZ1

Pfam

PF00651   BTB        + More
PF00023   Ank
PF12796   Ank_2
PF13606   Ank_3

Interpro

IPR000210   BTB/POZ_dom        + More
IPR011333   SKP1/BTB/POZ_sf
IPR009072   Histone-fold
IPR002110   Ankyrin_rpt
IPR036770   Ankyrin_rpt-contain_sf
IPR020683   Ankyrin_rpt-contain_dom

SUPFAM

SSF54695   SSF54695        + More
SSF47113   SSF47113
SSF48403   SSF48403

Gene 3D

1.10.20.10 1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

H9IUZ1 A0A2W1BVF0 A0A2A4J9A9 A0A0L7L5G8 A0A194QC93 A0A194RJW4 + More
A0A2H1X2F2 A0A3S2NLH9 A0A212EVK5

KEGG

101735323 K10683 BRCA1-associated RING domain protein 1 | (RefSeq) BRCA1-associated RING domain protein 1-like

GO

GO:0046982

Length:

437

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00430

outside

1 - 437

Pi

28.485139

Theta

20.300788

Tajima's D

1.105045

CLR

0.687407

CSRT

0.694515274236288

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics