SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08131
Pre Gene Modal
BGIBMGA001072
Annotation
PREDICTED:_ankyrin_repeat_and_BTB/POZ_domain-containing_protein_BTBD11_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.279
 

Sequence

CDS
ATGGCTAGTGAGGATGCGTGCGGGGGGCGCGCGGAGGCGGTGAGCGGCGGGGACTCACGTGAGCACGGCTGCGCCTGCACCGCGTGGTCACCGCGCCGACAACCTGCCCCGCATGAGATCCTTAGACCGAAACCTAGAAGACCCTCAAGTGGATGTCGTCCTGGTGAGGAAGGCGCGTGGTGCAGCAGCGTCGGAGGAGCGAGGGCTCTCCGCGTACGGGTCTCGCACGCGACGGCTGCGGCCGCTCCCGTCACGCGCCGACTGTCGCCTCCGCCACACGCTCATCGCGCCACCACGCCTCCACCACCCTCAGAACTCAATAAATCCCACGAAGAGATACCGCAAGCAGTACCAGAGCCCACCAGTACGGCGCCACCGAAGCCAGTGACAGCTGTTTCTCAGCTGACCAACGCAGCCTCCCCGCAGACGAGCTACCCCCTAGAGAGACGAGCGCCCAAACATGATCATCTCCATTCAACACCCGCACAGAATGGAGTACGCGAATGCAACAGCAGTTCCGATGAGAACAGATCATCGGGTCATGCATCCATGTCGGACAGCGGGGGTGGCGGGGAGGCGGGGAGGGAAGAGCCTAGGAGGTCCAGGCAACAACCTCATGTTAGAACAAAACATCGACCTCACAATAAGCTACAATCGCCTTGGCCTGGAGGTGGAGGTCTAGAAGATATAAGGTCAGCTATAAAACAGCTAACTCTTCGTTCTCGAGACAGCAGCAGTACAGCCACTAGCGGCGCTTCAAGCGCTGGGGGAGGAACTAATAACGGAGTTCCTGAAAACGGTAGCGCCACAGACGCCCGCAGAAGGAGAGCTCCACTTGTCCGACAACCGTCTCTGGATACAGTCTGTACCAACGTCACCAGCGCCGATGAATTTGTCTGGGTGGACTCTCATAATAGACTTGTAGAGCTGCGCTGCATGCCTTGGACAGCAAGTGAGGTGAGTCGGGTATTGCAGACAGGAAGATGCCGTGACTTAGCACCCAAGATGGCGCCGGATACTCCCCCAAGGCTGGCCTATTTACTACAAAGGGCCTTAGTCCGGATTGCGAGGGAAGCGCAACGCTTGTCTCAAAACTTTGGGTTCTGCTCCAAGCATGAAGTGGCCGGTGCTTTTAAGATCGTTCTCAGCACGCCACTAGCAGATGCTTGTATTAAGGCCTGTCAGCGTGCAGCCACAATGTACGCGACATCAGGCGGAGCGGCGCGAAGACTGGGGTCAGCCACCCGCGCCCGGACCAGCCTCGCGCCGGGACGCTTCCACCGATGGATGCTCGATGTCCGCGTCGCGCCTTTCGTACATGAATACGCAGCGATCTATCTATGTGCTGGCATGGAAACTCTATTAGAAGAGATAGCGTTGATTGCGGCTGCAAGTTCAGGAGGCAGTAATGTTGGTGTTCCGTCCATCACGCCGGCAGCAGTCGATCTCGCTGTAGCCAATTGTGCTGATCTCTGGGGCTTATTACAGCCATACAGTCATCTCAATGCCGGGAGAATAGCATCAGGAGCTCTTTCACTCTCAAGATGGGAGTCAATGAGTTCGTTAGGATCCGGTTCATCATCAGGAATGACTAGACCAGAGCATAGGCAATTAGGACTCAGTCATGATTCTGGCATCACTACAAATGGTTCGAATGGTTCCGGAACGTCGGCCGGTTCAAACACTGGTTCAGCAGGATCTAGTGCTTCAGTGCTGCTGACCACGTGCGCAGGCTCGTCAGCGGAACTGAGAGCAGTGCTCCGACGCGTCCACCCGCGAGCGCCCCCCCTGTCCCCGCCGGCCGAGAGAGCTCTCTACTACTTCATGAGATGCTCACAATTGGAGCACTCCACCAGTACAGGGGGCAGTTGTGGAGGTGCTGGACTGTGGGGGGAGCGTGGGTCTGGAGCTCTGCCTCCGCTGGGCGAGTGGGTGCGTGTCATACGTGCTCACGCGTCTCTCAGACCCCCTCCGGCTGTACCCGACGCTGATGACGTCATGCAAGCTGCTAGACTACTGTTGCCGCATGCTGACTGCCCACCGAGACCGATCACTATAGAAGAAGCGATAGAACCAGTTTGGTCAAGATGCACCCGCACTCCAGACGAACTCAATAGAGTTGCTCTGGGCTTAGCGCAGCGAGCTCTTCTGAGTGGAAGACCTGAAATCGTTGGTGGTATCAGAACTCTCCTACCACCAGCTGGTTTGGATGCCACGGATGCCTCCGGCATGACTGTGCTCATGAAGGCAGCTCTTGCTGGAGACGATCAGATTGTTACCATGCTCCTTGAAGCCGGAGCCGACCCAAATGTTGAGACTGGGGGCTCGTCAGCTGCTCACTGTGCAATGCCACTGTCGCCTCGCTCACCTGGAACTCATCAGAGTAATCCAGCTTACACACCACCTACTGCAGGCTGGACGGCGTTGGTGTACGCCTGCAGCGGTGCCGGCGGCGGTGGGGCGCTGGAGTGCGCGCGACGGTTACTGTCCGCTGGAGCACGAGTCGACGGCGCGCCCGCCAGAGGAGATGACGTTTGTACGCTAACACCACTGCAGGTTGCCTGCGGTGTCGGCAATTTAGAGTTGGTGCAGCTGCTTCTGTCAAATGGAGCCGATCCGTTCCTTTCCACTCAGTTGAACGACGCTCTCTGCTACTCTGTGGCGGCACAATATGGATGTTACAGTGCAGTAGCGGTGTGCTGTACGCACGGGCGCCGAGGGTGTCTCCGCGCGGCGATGCGGGGCGGGGCGCGGGTGGCGGGGGAGGTCCTGTCTCTGGAGGAGGTGCTGGCCGAGGGGGCGGCAGGGGCGGGGGCGCCCACGAGACCTCCGGCCTTCACCAAACAACAGCAGAGGGCGTTGCAAGACGCCATGTACTGTGCCGCTGAGACTGATCATTTAGATATCACTCTCGAGTTGAGGGCGTTAGGAGTGCCATGGTCGCTACATGCCTGGACTCTGTCCCTAGCGGCTGCCGCTGATGCTGCGCTAGACCATGTTATCGATCAGCTATTACAAGACTTCTTACAGGTTTGTCCGTCAGACGACAGTCACTACAGTAAACAATTCATTTACGAATGTCTCCCTCTACTGTTCAACATTCTACGGTACAGTAAGAAGGAGGGCACGGTGCTGTTGCTGGCCGACATACTGTGCGCTTGCTACGGTCGTGAGCCGGTGCCGAGCGTGGAGCCTCCGCCCCCCGCGGCCCCGGCGCCCGCCAGGGTGGACCCGTCCTACGTCAACAACCCTTCGCTCGCTGACGTTACGTTCAGGGTGGAAGGACGTCTATTCTATGGTCATAAAATAGTTTTGGTGTCGGAGTCACCGCGGCTGCGAGCAATGTTGGCGCCACCTCGACCTTCCAGCGAAGCATTACCACCGACAAATACCGCACCTCCCCTTGTTCAGATTAACGACATAAGATACCATATATTTGAGCAAGTAATGAAATATCTGTATTCCGGCGGCTGCTCTGGGCTCGACATACCCGAGACTGATGTGTTGGAGGTGCTGGCAGCCGCTTCGTTCTTCCAACTGTTGCCGCTACAGAGGCACTGCGAGGCCAGAGCCGCTAAATCAGTTGATCTACACAATCTCGTCTCAGTTTATATTCACGCTAAGGTATATGGAGCATCGCAACTCTTAGAATACTGCCAAGGCTTCCTTCTCCAGAACATGGTGGCTCTCTTGACATATGACGACTCGGTAAAGCGATTGCTCTTCGGCAAACGGCTGCCCGGCCACAACGTGCTTGGCGCTTTATTAACAACACTGCAAAAACGAATCGAATCAAGGAAAAGTCATTCTAAAGCTAGCCGGAATCCTATAAAAATAACATCCAGAAGACAGAATGGGTGCCATCTACCAGACTCAAAATGTAACAGATCTTGGGATCCTCAGAAACACACAAAGAATTTTCAATAA
Protein
MASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILRPKPRRPSSGCRPGEEGAWCSSVGGARALRVRVSHATAAAAPVTRRLSPPPHAHRATTPPPPSELNKSHEEIPQAVPEPTSTAPPKPVTAVSQLTNAASPQTSYPLERRAPKHDHLHSTPAQNGVRECNSSSDENRSSGHASMSDSGGGGEAGREEPRRSRQQPHVRTKHRPHNKLQSPWPGGGGLEDIRSAIKQLTLRSRDSSSTATSGASSAGGGTNNGVPENGSATDARRRRAPLVRQPSLDTVCTNVTSADEFVWVDSHNRLVELRCMPWTASEVSRVLQTGRCRDLAPKMAPDTPPRLAYLLQRALVRIAREAQRLSQNFGFCSKHEVAGAFKIVLSTPLADACIKACQRAATMYATSGGAARRLGSATRARTSLAPGRFHRWMLDVRVAPFVHEYAAIYLCAGMETLLEEIALIAAASSGGSNVGVPSITPAAVDLAVANCADLWGLLQPYSHLNAGRIASGALSLSRWESMSSLGSGSSSGMTRPEHRQLGLSHDSGITTNGSNGSGTSAGSNTGSAGSSASVLLTTCAGSSAELRAVLRRVHPRAPPLSPPAERALYYFMRCSQLEHSTSTGGSCGGAGLWGERGSGALPPLGEWVRVIRAHASLRPPPAVPDADDVMQAARLLLPHADCPPRPITIEEAIEPVWSRCTRTPDELNRVALGLAQRALLSGRPEIVGGIRTLLPPAGLDATDASGMTVLMKAALAGDDQIVTMLLEAGADPNVETGGSSAAHCAMPLSPRSPGTHQSNPAYTPPTAGWTALVYACSGAGGGGALECARRLLSAGARVDGAPARGDDVCTLTPLQVACGVGNLELVQLLLSNGADPFLSTQLNDALCYSVAAQYGCYSAVAVCCTHGRRGCLRAAMRGGARVAGEVLSLEEVLAEGAAGAGAPTRPPAFTKQQQRALQDAMYCAAETDHLDITLELRALGVPWSLHAWTLSLAAAADAALDHVIDQLLQDFLQVCPSDDSHYSKQFIYECLPLLFNILRYSKKEGTVLLLADILCACYGREPVPSVEPPPPAAPAPARVDPSYVNNPSLADVTFRVEGRLFYGHKIVLVSESPRLRAMLAPPRPSSEALPPTNTAPPLVQINDIRYHIFEQVMKYLYSGGCSGLDIPETDVLEVLAAASFFQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGASQLLEYCQGFLLQNMVALLTYDDSVKRLLFGKRLPGHNVLGALLTTLQKRIESRKSHSKASRNPIKITSRRQNGCHLPDSKCNRSWDPQKHTKNFQ

Summary

Similarity
Belongs to the histone H2A family.
Pfam
PF12796   Ank_2        + More
PF00023   Ank
PF00651   BTB
PF13606   Ank_3
Interpro
IPR002110   Ankyrin_rpt        + More
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR009072   Histone-fold       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR002119   Histone_H2A       
IPR032458   Histone_H2A_CS       
SUPFAM
SSF47113   SSF47113        + More
SSF48403   SSF48403       
SSF54695   SSF54695       
Gene 3D
PDB
6MOL     E-value=3.11619e-08,     Score=144

Ontologies

Topology

Length:
1308
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00964999999999998
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00005
outside
1  -  1308
 
 

Population Genetic Test Statistics

Pi
19.449786
Theta
17.83083
Tajima's D
0
CLR
0.765722
CSRT
0.370381480925954
Interpretation
Uncertain
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