Gene

KWMTBOMO08129  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001092

Annotation

PREDICTED:_uncharacterized_protein_LOC101735793_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):17152132-17160660      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 4.285

CDS

ATGGAGAAGCTCGTTCTGTGTTTAGTGTTGTTTGCGGTTGTAGCCGTGCAAGCGAGACACCAGTTCCCTAGAGTCAGCGAGCGCCTTGGGGAACCCTTCAGGATAGGGGAATACATCAAAGTTGTCTGCACGTCAGAACTCAGCAACGAAAGGGATCACATCATGGAAAAGTCGAGATGCGGTGAACCGAAGGATGTCTTCGTGCAGTTAAAACCTAACTCACCTCACGAGCTGGTGAGCCCTAGCGCGGTTTGGGTGAAGAACTGTGTCGGGATTTGCGATTATGACAATGAAGGATCCTGTATTGCGACTGAAACAAAAATCAGACACATACCGGTACGAATATACAATGGAAATACGAATAAAGAATCATGTGCCACGTACGCGGTGGAGGAGCACGTCAAGTGTGGGTGCTGCGCCCTGAGTCCCGACCACTGCGTCTCCCCCAGGGTGTTCAATCCTCGTAAGTGCAGCTGCCACTGCCCCAATATCGAGGACAGGAGGGAATGCGTCAAGAAGACGGACATGACTTGGAACCGAGCTCACTGCAAATGTGAAAAGATATAG

Protein

MEKLVLCLVLFAVVAVQARHQFPRVSERLGEPFRIGEYIKVVCTSELSNERDHIMEKSRCGEPKDVFVQLKPNSPHELVSPSAVWVKNCVGICDYDNEGSCIATETKIRHIPVRIYNGNTNKESCATYAVEEHVKCGCCALSPDHCVSPRVFNPRKCSCHCPNIEDRRECVKKTDMTWNRAHCKCEKI

Similarity

Belongs to the PDGF/VEGF growth factor family.

Uniprot

H9IV12   A0A0L7KWS4   A0A2W1C0P6   A0A2H1W2J3   A0A194RFK4   A0A194Q691   + More
A0A212EVM2   A0A3S2P6I2   A0A2J7Q1V3   A0A067QJT5   A0A2P8YED6   A0A195D3H7   A0A158P1N2   A0A195DC45   A0A2P8Z536   A0A226E814   A0A182SXT9   A0A1Y1NK43   A0A1Y1NGK6   A0A182Y7H6   A0A3L8D7M3   A0A0K2UYJ7   A0A2S2QPU2   A0A026W4B9   C4WS19   J9PD10   A0A2M4CY31   A0A2M3Z865   A0A084VAA4   A0A2M3ZID6   A0A2M3Z8Q8   A0A2M3Z7I6   A0A2M4BTE5   A0A2M4BT88   C4WS18   A0A2M3ZI38   A0A2M3ZCE0   A0A182W4R0   A0A2M3ZCD1   A0A1W4XDN0   A0A2M3ZE55   W5JKH3   A0A2M4CZG2   A0A182RV46   A0A182M748   A0A2M4AM54   A0A2M4CZC9   A0A2M4CLX2   A0A182FIP6   A0A2M4AIP1   A0A2M4CHK2   A0A2M4CHP4   A0A2M4AMA0   A0A2D1N520   A0A3G2KWW0   A0A2M4AK81   B0X067   A0A2M4ARU3   A0A2M4AM82   A0A1D2N837   A0A034VBN1   A0A182J870   A0A034VD83   A0A182QAG6   A0A182IA60   A0A154NZG5   A0A182NVH4   A0A182L7Z4  

Pubmed

19121390    26227816    28756777    26354079    22118469    24845553    + More
29403074    21347285    28004739    25244985    30249741    24508170    23933264    24438588    20920257    23761445    30308291    27289101    25348373    20966253   

EMBL

BABH01000064    BABH01000065    BABH01000066    BABH01000067    JTDY01004935    KOB67580.1    + More
KZ149891    PZC79067.1    ODYU01005883    SOQ47233.1    KQ460297    KPJ16239.1    KQ459439    KPJ01053.1    AGBW02012175    OWR45533.1    RSAL01000286    RVE42962.1    NEVH01019377    PNF22566.1    KK853392    KDR07915.1    PYGN01000661    PSN42629.1    KQ976948    KYN06924.1    ADTU01001092    ADTU01001093    KQ980989    KYN10485.1    PYGN01000191    PSN51614.1    LNIX01000006    OXA53127.1    GEZM01003020    JAV96975.1    GEZM01003024    JAV96971.1    QOIP01000012    RLU16299.1    HACA01025556    CDW42917.1    GGMS01010490    MBY79693.1    KK107488    EZA49889.1    AK340012    BAH70689.1    GU002536    ADF87936.1    GGFL01006064    MBW70242.1    GGFM01003929    MBW24680.1    ATLV01003052    KE524109    KFB34898.1    GGFM01007532    MBW28283.1    GGFM01004165    MBW24916.1    GGFM01003723    MBW24474.1    GGFJ01007133    MBW56274.1    GGFJ01007139    MBW56280.1    AK340011    BAH70688.1    GGFM01007384    MBW28135.1    GGFM01005412    MBW26163.1    GGFM01005384    MBW26135.1    GGFM01006010    MBW26761.1    ADMH02000934    ETN64636.1    GGFL01006532    MBW70710.1    AXCM01001248    GGFK01008544    MBW41865.1    GGFL01006508    MBW70686.1    GGFL01002101    MBW66279.1    GGFK01007338    MBW40659.1    GGFL01000605    MBW64783.1    GGFL01000577    MBW64755.1    GGFK01008605    MBW41926.1    KY356888    ATO74511.1    MH475138    QCYY01000154    AYN64309.1    ROT85909.1    GGFK01007869    MBW41190.1    DS232229    EDS37942.1    GGFK01010168    MBW43489.1    GGFK01008585    MBW41906.1    LJIJ01000169    ODN01136.1    GAKP01019430    JAC39522.1    AXCP01007866    AXCP01007867    AXCP01007868    GAKP01019429    JAC39523.1    AXCN02002155    APCN01001124    KQ434778    KZC04388.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000283053    + More
UP000235965    UP000027135    UP000245037    UP000078542    UP000005205    UP000078492    UP000198287    UP000075901    UP000076408    UP000279307    UP000053097    UP000030765    UP000075920    UP000192223    UP000000673    UP000075900    UP000075883    UP000069272    UP000283509    UP000002320    UP000094527    UP000075880    UP000075886    UP000075840    UP000076502    UP000075884    UP000075882   

PRIDE

H9IV12   

Pfam

PF03128   CXCXC        + More
PF00341   PDGF
PF09741   DUF2045

Interpro

IPR029034   Cystine-knot_cytokine        + More
IPR004153   CXCXC_repeat       
IPR000072   PDGF/VEGF_dom       
IPR019141   DUF2045       

SUPFAM

SSF57501   SSF57501       

Gene 3D

2.10.90.10    

ProteinModelPortal

H9IV12   A0A0L7KWS4   A0A2W1C0P6   A0A2H1W2J3   A0A194RFK4   A0A194Q691   + More
A0A212EVM2   A0A3S2P6I2   A0A2J7Q1V3   A0A067QJT5   A0A2P8YED6   A0A195D3H7   A0A158P1N2   A0A195DC45   A0A2P8Z536   A0A226E814   A0A182SXT9   A0A1Y1NK43   A0A1Y1NGK6   A0A182Y7H6   A0A3L8D7M3   A0A0K2UYJ7   A0A2S2QPU2   A0A026W4B9   C4WS19   J9PD10   A0A2M4CY31   A0A2M3Z865   A0A084VAA4   A0A2M3ZID6   A0A2M3Z8Q8   A0A2M3Z7I6   A0A2M4BTE5   A0A2M4BT88   C4WS18   A0A2M3ZI38   A0A2M3ZCE0   A0A182W4R0   A0A2M3ZCD1   A0A1W4XDN0   A0A2M3ZE55   W5JKH3   A0A2M4CZG2   A0A182RV46   A0A182M748   A0A2M4AM54   A0A2M4CZC9   A0A2M4CLX2   A0A182FIP6   A0A2M4AIP1   A0A2M4CHK2   A0A2M4CHP4   A0A2M4AMA0   A0A2D1N520   A0A3G2KWW0   A0A2M4AK81   B0X067   A0A2M4ARU3   A0A2M4AM82   A0A1D2N837   A0A034VBN1   A0A182J870   A0A034VD83   A0A182QAG6   A0A182IA60   A0A154NZG5   A0A182NVH4   A0A182L7Z4  

KEGG

101735793    no KO assigned | (RefSeq) uncharacterized LOC101735793

GO

GO:0016020   GO:0008083   GO:0016021  

PANTHER

PTHR21477:SF13  

SignalP

Position:   1 - 18,         Likelihood:  0.997754

 

 

Length:

188

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.40915

Exp number, first 60 AAs:

0.40915

Total prob of N-in:

0.04383

outside

1  -  188

 

 

Pi

19.665479

Theta

18.223447

Tajima's D

-0.926885

CLR

1.393544

CSRT

0.148792560371981

Interpretation

Uncertain