Gene

KWMTBOMO08109

Pre Gene Modal

BGIBMGA001101

Annotation

PREDICTED:_TBC1_domain_family_member_19_[Amyelois_transitella]

Location

Bomo_Chr13(-):16034334-16042726      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.195

CDS

ATGGACGGGGTTAAAGAAGAAAAGCTAGTAGCATCGCCAAATGTGAAAAAAGAAGACTTTAAACAAACGCTGCAGCAGGCTATGAAAGAAAAGGGATTAGACACGAAATTAAGGAACACTGTTTTCCATTGGGTTCGAACGCAAAGTAAACAGAATAAATTAGATCCTTTAACTTCACTATCAAAAGCGAGCGCACAATGGGAGAAGAGAATACACAAATCGTTAAATTCCATGTGTTCAGATCTCGAAACGTCATTAGCGAAAATACGGCCACAAAGCGAACAGGACGAATTAGCTGATAAATGGAATGAATTGAGCACATACAATTTAGATTTAACAAAGTACCGGCCAGTTTACGCTCCGAAAGATTTTTTAGAAGTTTTGTTAACACTATCCGGATATGTTCCATTCACGAGAGAAGACGAGCCAAAGTGGGAATTCGCGCATCTACCCCTTCAGGTGAAGACTTTAGATCAAATCAGAAAATTATACTTGGAGTGGTCAAGCGGTGAGCCGCTGTTAGGCGCTAACCCGCACATGGCGAGCGCAGTGCCAGGGTTCGTCACTCTAGAGGCCGAGCGTGTCAGCTTGGGCGAAAGAGTGGCGGCTCTGGGCTACGCACCCGTGGTACAGGAATATTTGAAGAAGGGCAGCCCACAGTGTCTAAGGGCCAAATTGTGGGCTCAAGTGCTAGGCTCGGAGATCAAGGGACAGCAAATAACATATTTCAATCAACTAAAGAAAAGTGTTCTGGAAGTGGATCTGATGATAGACAAGTTAATATTCAAAGACGTGCAGTTAACCGCCTCGAACGATGATCAATATTTTGTATTCGAAGATGTATTATACCAGGTAATGTTATGTTTCTCCCGAGACTGCGACGTGATGCAGCAGCTCAAGGGCAGCATCGGTAGTCCTCTCACGGTCACTATAAAGGGCAAACAGACATCCACCGACAGCCTCACAGTCTTCCCTCCCAGCGGGGTCATACCTTTTCACGGCTTTACTATGTATGCAACTCCCTTTTGTTATTTGTACGACGATCCCGTGCAACTTTACTACACGTTTCGAGCGTTCTACATAAGGTACTGGCATCGACTACATTACATATCGACACATCCACAGGGTATAGTATCGTTATGCCTTTTGTACGAGAGGCTTTTGGAAGCGAACGAACCTTTGTTATGGATACATTTCAGAAATATAAACATTAACCCAATCAGAGTTGTATTCAAGTGGTTAATGCGGGCATTCAGTGGGCACCTACCGCCGGATCAACTGTTACTATTATGGGATGCGATACTAGGTTACGACTGCCTAGAAATTCTGCCGTTGCTGGCGCTGGCGATATTGAGTTTCAGGAAAGAGAATATCTTCCAAGTTAATACGTTGCAGAATGTCGACGCTGTTTTAGCCGATCTATCGACTATATCGGTTATACCGCTTCTGCAATTGGCTTTGATGAGAGCTTAG

Protein

MDGVKEEKLVASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLTSLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQDELADKWNELSTYNLDLTKYRPVYAPKDFLEVLLTLSGYVPFTREDEPKWEFAHLPLQVKTLDQIRKLYLEWSSGEPLLGANPHMASAVPGFVTLEAERVSLGERVAALGYAPVVQEYLKKGSPQCLRAKLWAQVLGSEIKGQQITYFNQLKKSVLEVDLMIDKLIFKDVQLTASNDDQYFVFEDVLYQVMLCFSRDCDVMQQLKGSIGSPLTVTIKGKQTSTDSLTVFPPSGVIPFHGFTMYATPFCYLYDDPVQLYYTFRAFYIRYWHRLHYISTHPQGIVSLCLLYERLLEANEPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAILGYDCLEILPLLALAILSFRKENIFQVNTLQNVDAVLADLSTISVIPLLQLALMRA

Uniprot

A0A2H1WWF4   A0A437BPH5   A0A2A4K393   A0A212ETN2   A0A194QC78   A0A1B6GZ25   + More
A0A1B6KZC5   A0A1B6HSG2   A0A194RFI9   A0A1B6D6P0   A0A088A4M7   D2A1I5   A0A1B6GGU9   A0A1B6JD21   A0A0C9PVE1   A0A2P8ZCY9   A0A1B6I016   K7ISA4   A0A195E5N0   E2BLK2   A0A232ENH6   A0A0N0U3F4   A0A151HZ23   A0A0L7R3A0   E2AJP4   F4W4C9   A0A151WXE6   A0A1B6II49   A0A026WJ32   A0A2A3E9C5   T1HK41   U4UMS3   A0A154PQI7   A0A151ILV7   A0A1S4E7E1   U4UN97   A0A067QYJ8   A0A2J7RRW7   A0A1B6M8T7   J9JPK9   E0W319   A0A1I8NVI9   A0A1I8NVJ3   A0A336LY43   A0A0K2T1U8   A0A2S2NAL0   A0A1A9VMJ0   A0A0L0CDH8   B4JDH8   A0A182RDQ9   B4P085   A0A182JF88   B3N4T7   B4N788   A0A182W6G1   A0A182LXR0   A0A310SNH7   A0A1I8NVI7   A0A034W9X2   Q9VMT4   B4Q3J6   A0A0K8TZJ8   A0A182YDU8   A0A084WH79   B4LSN2   A0A1B0AEK7   A0A182L0J9   B4I1E1   A0A182IC70   Q7Q4F7   A0A182XFY3   A0A1W4UV89   Q16YB1   A0A182PLR0   A0A182TRN9   A0A3B0JB05   A0A182NTZ3   A0A182JT46   W8B575   A0A182Q904   B3MLM7   A0A182V911   A0A1S4GYS3   W5JQK2   B4G6P9   Q29M19   J9JU69   B4KG17   A0A0M4E5E9   A0A1A9Y3H1   A0A1Q3G5C7   A0A182G4P9   A0A1J1IJZ5   A0A182F3F6   A0A1B0GCL6   A0A0R1DSM3   A0A0J9TG14   X2J8N3  

Pubmed

22118469    26354079    18362917    19820115    29403074    20075255    + More
20798317    28648823    21719571    24508170    23537049    24845553    20566863    26108605    17994087    17550304    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25244985    24438588    20966253    12364791    17510324    24495485    20920257    23761445    15632085    18057021    26483478   

EMBL

ODYU01011528    SOQ57317.1    RSAL01000023    RVE52269.1    NWSH01000210    PCG78374.1    + More
AGBW02012542    OWR44853.1    KQ459439    KPJ01041.1    GECZ01002107    JAS67662.1    GEBQ01023207    JAT16770.1    GECU01030110    JAS77596.1    KQ460297    KPJ16224.1    GEDC01015958    JAS21340.1    KQ971338    EFA01534.1    GECZ01008100    JAS61669.1    GECU01010632    JAS97074.1    GBYB01005403    JAG75170.1    PYGN01000098    PSN54369.1    GECU01027446    JAS80260.1    KQ979608    KYN20500.1    GL449033    EFN83439.1    NNAY01003136    OXU19923.1    KQ435885    KOX69582.1    KQ976717    KYM76778.1    KQ414663    KOC65256.1    GL440062    EFN66328.1    GL887513    EGI70942.1    KQ982685    KYQ52341.1    GECU01021115    JAS86591.1    KK107182    EZA56008.1    KZ288315    PBC28320.1    ACPB03017500    KB632373    ERL93793.1    KQ434999    KZC13380.1    KQ977085    KYN05871.1    KB632397    ERL94602.1    KK852872    KDR14568.1    NEVH01000597    PNF43574.1    GEBQ01007637    JAT32340.1    ABLF02027020    ABLF02027024    ABLF02027027    ABLF02027028    ABLF02027030    DS235881    EEB20025.1    UFQS01000219    UFQT01000219    SSX01531.1    SSX21911.1    HACA01002080    CDW19441.1    GGMR01001556    MBY14175.1    JRES01000536    KNC30315.1    CH916368    EDW03348.1    CM000157    EDW88950.1    CH954177    EDV57839.1    CH964182    EDW80229.1    AXCM01000782    KQ760801    OAD58962.1    GAKP01008379    JAC50573.1    AE014134    AY058392    AAF52227.1    AAL13621.1    CM000361    CM002910    EDX03800.1    KMY88264.1    GDHF01032613    JAI19701.1    ATLV01023795    KE525346    KFB49573.1    CH940649    EDW63771.1    CH480820    EDW54348.1    APCN01000778    AAAB01008964    EAA12225.1    CH477519    EAT39615.1    OUUW01000004    SPP79524.1    GAMC01010260    JAB96295.1    AXCN02000807    CH902620    EDV31776.1    ADMH02000622    ETN65578.1    CH479180    EDW29163.1    CH379060    EAL33877.1    ABLF02036331    ABLF02036344    ABLF02036348    ABLF02036353    CH933807    EDW13156.1    KRG03594.1    CP012523    ALC39321.1    GFDL01000035    JAV35010.1    JXUM01144169    KQ569733    KXJ68533.1    CVRI01000054    CRL00555.1    CCAG010021474    KRJ98112.1    KMY88265.1    AHN54131.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000053268    UP000053240    UP000005203    + More
UP000007266    UP000245037    UP000002358    UP000078492    UP000008237    UP000215335    UP000053105    UP000078540    UP000053825    UP000000311    UP000007755    UP000075809    UP000053097    UP000242457    UP000015103    UP000030742    UP000076502    UP000078542    UP000079169    UP000027135    UP000235965    UP000007819    UP000009046    UP000095300    UP000078200    UP000037069    UP000001070    UP000075900    UP000002282    UP000075880    UP000008711    UP000007798    UP000075920    UP000075883    UP000000803    UP000000304    UP000076408    UP000030765    UP000008792    UP000092445    UP000075882    UP000001292    UP000075840    UP000007062    UP000076407    UP000192221    UP000008820    UP000075885    UP000075902    UP000268350    UP000075884    UP000075881    UP000075886    UP000007801    UP000075903    UP000000673    UP000008744    UP000001819    UP000009192    UP000092553    UP000092443    UP000069940    UP000249989    UP000183832    UP000069272    UP000092444   

PRIDE

Q9VMT4   

Pfam

PF00566   RabGAP-TBC        + More
PF00795   CN_hydrolase
PF02540   NAD_synthase

Interpro

IPR000195   Rab-GTPase-TBC_dom        + More
IPR035969   Rab-GTPase_TBC_sf       
IPR014729   Rossmann-like_a/b/a_fold       
IPR036526   C-N_Hydrolase_sf       
IPR003010   C-N_Hydrolase       
IPR003694   NAD_synthase       
IPR022310   NAD/GMP_synthase       
IPR036915   Cyclin-like_sf       
IPR013763   Cyclin-like       

SUPFAM

SSF47923   SSF47923        + More
SSF56317   SSF56317       
SSF47954   SSF47954       

Gene 3D

3.40.50.620    

CDD

cd00553  NAD_synthase
cd00043  CYCLIN

ProteinModelPortal

A0A2H1WWF4   A0A437BPH5   A0A2A4K393   A0A212ETN2   A0A194QC78   A0A1B6GZ25   + More
A0A1B6KZC5   A0A1B6HSG2   A0A194RFI9   A0A1B6D6P0   A0A088A4M7   D2A1I5   A0A1B6GGU9   A0A1B6JD21   A0A0C9PVE1   A0A2P8ZCY9   A0A1B6I016   K7ISA4   A0A195E5N0   E2BLK2   A0A232ENH6   A0A0N0U3F4   A0A151HZ23   A0A0L7R3A0   E2AJP4   F4W4C9   A0A151WXE6   A0A1B6II49   A0A026WJ32   A0A2A3E9C5   T1HK41   U4UMS3   A0A154PQI7   A0A151ILV7   A0A1S4E7E1   U4UN97   A0A067QYJ8   A0A2J7RRW7   A0A1B6M8T7   J9JPK9   E0W319   A0A1I8NVI9   A0A1I8NVJ3   A0A336LY43   A0A0K2T1U8   A0A2S2NAL0   A0A1A9VMJ0   A0A0L0CDH8   B4JDH8   A0A182RDQ9   B4P085   A0A182JF88   B3N4T7   B4N788   A0A182W6G1   A0A182LXR0   A0A310SNH7   A0A1I8NVI7   A0A034W9X2   Q9VMT4   B4Q3J6   A0A0K8TZJ8   A0A182YDU8   A0A084WH79   B4LSN2   A0A1B0AEK7   A0A182L0J9   B4I1E1   A0A182IC70   Q7Q4F7   A0A182XFY3   A0A1W4UV89   Q16YB1   A0A182PLR0   A0A182TRN9   A0A3B0JB05   A0A182NTZ3   A0A182JT46   W8B575   A0A182Q904   B3MLM7   A0A182V911   A0A1S4GYS3   W5JQK2   B4G6P9   Q29M19   J9JU69   B4KG17   A0A0M4E5E9   A0A1A9Y3H1   A0A1Q3G5C7   A0A182G4P9   A0A1J1IJZ5   A0A182F3F6   A0A1B0GCL6   A0A0R1DSM3   A0A0J9TG14   X2J8N3  

PDB

2QQ8     E-value=0.0848536,     Score=84

KEGG

101736531    no KO assigned | (RefSeq) TBC1 domain family member 19

GO

GO:0005524   GO:0003952   GO:0009435   GO:0016021   GO:0043087   GO:0005096  

PANTHER

PTHR23090  

Length:

490

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.22303

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01034

outside

1  -  490

 

 

Pi

2.330089

Theta

20.346948

Tajima's D

-0.777373

CLR

1.576684

CSRT

0.180990950452477

Interpretation

Uncertain