Gene

KWMTBOMO08105

Pre Gene Modal

BGIBMGA001103

Annotation

PREDICTED:_growth_arrest_and_DNA_damage-inducible_proteins-interacting_protein_1_[Bombyx_mori]

Location

Bomo_Chr13(-):16016401-16017846      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.531

CDS

ATGAATTTGTGTGTTAGATTGAAATGCTTCCGTTATAACATTTCCAGCCATTTATACAGATATTCTACAACATCGGAAGCAATTGAACAAAATGAACAAGTAATTATTGACGACAGCGATGTAGCACAGGCGAAGGAAGAAGAAATTAATAAAAAGAGAAATATATCTCGTCTTAGTATGTCACATCATAACCTCGTTAACGGGAAACGACCTTACGACTATCCAATGAGTTTAGCTCATTTGACCGTGAAATACAACAGGAAAATGTATGGAAAATATGGAAGCGCTAGTGGAGTGAACCCTAGCTTATGCTGGCCAACTAGAGCAGACATCAGAGAGAAATTGGAATATGAATCCGAAGCATACCCTTTCACAATACAAGAGATGATGGAGACAACCAGGCAGAAACGTCTAGCTGAAGAGGAAAAGATACTGAAGAGAGATCAGGAAATTGTAGCCAAAATGGCAAAATTAGAGATGTGGAAAAAGGAACTTCGAAACAAAGTCGCCAAGAAAACTGCTGAAGCACAGGCTGCTAAGGACAAGAAGGAACGCCTTGTTGAGGAGGTGCGAAGACATTTTGGTTTCAAACTGGATTCTCGTGATGAAAGGTTCCAGGAGATGTTGGTCAAACGCGAGAAAGAACAAAAGAAACAGGAAAAACTAGCTAGAAAAGAAGCTAAGGAGAAGGTTATGATTGCCAAACTACAACAGAAGAATGCTGAAATCAGTGAAAACAAATAA

Protein

MNLCVRLKCFRYNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKYNRKMYGKYGSASGVNPSLCWPTRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQEMLVKREKEQKKQEKLARKEAKEKVMIAKLQQKNAEISENK

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A2H1WW83   A0A2A4JWT0   A0A194REF7   A0A194Q7R2   A0A212ETP6   S4PBA1   + More
A0A437BPL4   A0A0L7KQ96   A0A1Y1KJ71   A0A2J7QI39   A0A1B6EWH5   A0A1B6HR31   A0A2P8XEE9   A0A336MJT9   A0A0A9WQI7   A0A1D2N747   A0A1B6MNJ5   A0A226EJU1   A0A1L8DL07   A0A1L8DKR8   A0A336LYX0   A0A1Q3F958   A0A1B0AR99   A0A1A9WTJ7   A0A1A9YL25   A0A2M3ZI99   A0A182Q1F8   A0A1Q3FDX4   W5JU54   A0A1A9ZFZ3   B0WHI4   A0A2M4BWL1   A0A2M4BWN1   A0A2M4BWC0   A0A182FBY9   A0A1B0FKN5   A0A1A9V304   A0A2M4BWA3   A0A1B0D544   A0A2M4API8   A0A0K8TRI4   A0A182N3B5   A0A069DY32   T1DIB1   A0A0L0CQK2   A0A084VHX7   A0A182JH78   A0A1B0CJY1   A0A182Y714   A0A182KFN3   A0A182GT36   A0A182GXP2   E2B1J8   A0A182UP41   A0A182WXG5   Q7QHT3   A0A182HY41   A0A182LH86   A0A182U940   N6TX77   A0A182PTY6   B4KY16   J3JUV1   A0A182RLI1   A0A182SEM2   A0A1I8N3P7   Q17B01   A0A182W1N3   A0A3L8DUW7   A0A182M0B9   A0A1S4F9T1   A0A1I8P6F7   B4IWX9   A0A158NC23   A0A195BG89  

Pubmed

26354079    22118469    23622113    26227816    28004739    29403074    + More
25401762    26823975    27289101    20920257    23761445    26369729    26334808    26108605    24438588    25244985    26483478    20798317    12364791    14747013    17210077    20966253    23537049    17994087    22516182    25315136    17510324    30249741    21347285   

EMBL

ODYU01011528    SOQ57320.1    NWSH01000457    PCG76269.1    KQ460297    KPJ16218.1    + More
KQ459439    KPJ01035.1    AGBW02012542    OWR44849.1    GAIX01006017    JAA86543.1    RSAL01000023    RVE52265.1    JTDY01007400    KOB65236.1    GEZM01081920    JAV61479.1    NEVH01013960    PNF28250.1    GECZ01027434    JAS42335.1    GECU01030567    JAS77139.1    PYGN01002518    PSN30352.1    UFQT01001464    SSX30672.1    GBHO01033928    GBRD01010004    GDHC01004778    JAG09676.1    JAG55820.1    JAQ13851.1    LJIJ01000174    ODN01052.1    GEBQ01002505    JAT37472.1    LNIX01000003    OXA57021.1    GFDF01007029    JAV07055.1    GFDF01007028    JAV07056.1    UFQT01000317    SSX23182.1    GFDL01010945    JAV24100.1    JXJN01002295    GGFM01007523    MBW28274.1    AXCN02001116    GFDL01009298    JAV25747.1    ADMH02000442    ETN66470.1    DS231936    EDS27762.1    GGFJ01008329    MBW57470.1    GGFJ01008328    MBW57469.1    GGFJ01008239    MBW57380.1    CCAG010023454    CCAG010023455    GGFJ01007867    MBW57008.1    AJVK01011711    GGFK01009362    MBW42683.1    GDAI01000624    JAI16979.1    GBGD01002610    JAC86279.1    GAMD01001976    JAA99614.1    JRES01000064    KNC34452.1    ATLV01013242    KE524847    KFB37571.1    AJWK01015525    JXUM01086155    KQ563548    KXJ73678.1    JXUM01095976    KQ564234    KXJ72551.1    GL444934    EFN60455.1    AAAB01008816    EAA05241.3    APCN01004490    APGK01047882    KB741092    KB632050    ENN73920.1    ERL88311.1    CH933809    EDW18718.1    BT127016    AEE61978.1    CH477328    EAT43413.1    QOIP01000004    RLU23983.1    AXCM01004566    CH916366    EDV97380.1    ADTU01011293    KQ976500    KYM83192.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000283053    UP000037510    + More
UP000235965    UP000245037    UP000094527    UP000198287    UP000092460    UP000091820    UP000092443    UP000075886    UP000000673    UP000092445    UP000002320    UP000069272    UP000092444    UP000078200    UP000092462    UP000075884    UP000037069    UP000030765    UP000075880    UP000092461    UP000076408    UP000075881    UP000069940    UP000249989    UP000000311    UP000075903    UP000076407    UP000007062    UP000075840    UP000075882    UP000075902    UP000019118    UP000030742    UP000075885    UP000009192    UP000075900    UP000075901    UP000095301    UP000008820    UP000075920    UP000279307    UP000075883    UP000095300    UP000001070    UP000005205    UP000078540   

Pfam

PF10147   CR6_interact        + More
PF00083   Sugar_tr

Interpro

IPR018472   Damage-induce-interacting_prot        + More
IPR003663   Sugar/inositol_transpt       
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2H1WW83   A0A2A4JWT0   A0A194REF7   A0A194Q7R2   A0A212ETP6   S4PBA1   + More
A0A437BPL4   A0A0L7KQ96   A0A1Y1KJ71   A0A2J7QI39   A0A1B6EWH5   A0A1B6HR31   A0A2P8XEE9   A0A336MJT9   A0A0A9WQI7   A0A1D2N747   A0A1B6MNJ5   A0A226EJU1   A0A1L8DL07   A0A1L8DKR8   A0A336LYX0   A0A1Q3F958   A0A1B0AR99   A0A1A9WTJ7   A0A1A9YL25   A0A2M3ZI99   A0A182Q1F8   A0A1Q3FDX4   W5JU54   A0A1A9ZFZ3   B0WHI4   A0A2M4BWL1   A0A2M4BWN1   A0A2M4BWC0   A0A182FBY9   A0A1B0FKN5   A0A1A9V304   A0A2M4BWA3   A0A1B0D544   A0A2M4API8   A0A0K8TRI4   A0A182N3B5   A0A069DY32   T1DIB1   A0A0L0CQK2   A0A084VHX7   A0A182JH78   A0A1B0CJY1   A0A182Y714   A0A182KFN3   A0A182GT36   A0A182GXP2   E2B1J8   A0A182UP41   A0A182WXG5   Q7QHT3   A0A182HY41   A0A182LH86   A0A182U940   N6TX77   A0A182PTY6   B4KY16   J3JUV1   A0A182RLI1   A0A182SEM2   A0A1I8N3P7   Q17B01   A0A182W1N3   A0A3L8DUW7   A0A182M0B9   A0A1S4F9T1   A0A1I8P6F7   B4IWX9   A0A158NC23   A0A195BG89  

PDB

6NU3     E-value=1.29343e-11,     Score=166

KEGG

101737955    no KO assigned | (RefSeq) growth arrest and DNA damage-inducible proteins-interacting protein 1

GO

GO:0005634   GO:0016021   GO:0022857   GO:0004601   GO:0007049   GO:0005840   GO:0006412   GO:0015934   GO:0015914   GO:0046872   GO:0016876   GO:0043039  

PANTHER

PTHR31761  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00039

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05979

outside

1  -  247

 

 

Pi

19.698365

Theta

22.926771

Tajima's D

-0.450568

CLR

0.685557

CSRT

0.251587420628969

Interpretation

Uncertain