SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08103
Pre Gene Modal
BGIBMGA001056
Annotation
adipose_triglyceride_lipase_[Manduca_sexta]
Location in the cell
Nuclear   Reliability : 2.57
 

Sequence

CDS
ATGAACTTATCGTTCGCTGGTTGTGGCTTCCTCGGGATTTACCATGTTGGTGTTGCAGTTTGTTTCAAGAAATATGCGCCTCATCTCCTTCTAGGGAAGATATCAGGAGCTTCTTTTGGAGCTTTGTCAGCCTGTTGCTTGCTCTGTGATTTGCCCATAGGTGAAATCACATCTGATGTTCTCAGAGTGGTCCGCGAAGCAAGGTCAGGGTCCCTCGGACCCTTTAGCCCTTCATTCAACATTCAAAATGTGCTCCTTGAGGGCATGGAGAAATATTTACCCGAAGACGCCCATAAGATAGTGAGCGGTAAACTACATATATCACTAACCAGAGTATACGATGGGAAGAATGTTATTGTATCGGAGTTCCCTACAAGAGAAGATTTATTACAGGCGGTGATGGCGTCGTGCTTTGTCCCAGTATTTTCTGGCCTGTTGCCCCCCCGATTCCACGGCATCAGGTATATGGATGGAGGGTTCAGTGATAACCTGCCAGTGTTAGATGAGAACACCATCACGGTCAGTCCCTTCTGCGGGGAGAGCGATATATGTCCTAGGGATTTGAGTTCACAGTTATTCCACGTAAACCTAGCGAACACAAGTATAGAGCTATCAAAACAAAACATGAATCGATTCGCTCGCATCCTTTTCCCTCCAAAACCCGAAGTCTTAAGCAACATGTGCAAGCAAGGCTTCGACGACGCTCTTCGATTCTTGCACAGAAACAACCTGATATCTTGCACGAGATGTCTCGCCGTGCAGTCGACCTTCCAGCTTCAAGACGTCTTGGATGACACAACGTACGATTATGATCCGGATTGTGAAGAGTGCAAGACCCATAGACAGGATGCATTAGTGGACGATCTACCGGACACGGTGATGACGATATTCCAAAATGCCATCGATTCGGCCAACAACGGCATCGTGAACTGGGTGATGAAGCAACGTGCCGTCCGATACCTGAACCTCCTGACGCTGCCGTACCGAGTGCCCATCGACATCATGTATGCTACATTCACCAAATTCGTATCATGCACGCCGAAGATGAGCAAGTCAGTCTGGAAGCTAAGCCTCAATCTCCTGCAGCAGCTCCACGGCTTCGTGTACACGTCGCACGACAGGTCCGAAGCCGCGGCCAGGATATACTACAAGCTGACCACCGAGGCGAAGAGGGAAACCAACGAAGGACACCTCTTGGAGAGGCGACGAGCGAGTGAGTTCCGTGTGACGTACGGTGACGTGAGAATAACCTATGAGGATGCGGACACCTTCGAACAAATACTCAACGTGACGTCACACCACGATGCACTGCTCGCATACTACTACCTCGACGGAGAGAATAAGATGAAGATGACCGAGATATACGACGTGACCGATGCCGACACGGACGCTGTGCAGTCGCCCACAGAGCGGGACCTCAACAAGCAGCTGGAGTTCGACAACGACTGGTCCGACGAACTCATCACCAGTAACGAGGAACTGGACATGGAAGCGATGGACGATGACGCCCTGGCCGACCGGAACATATTCTCGGACCCGGAGAGCGAGTGGAACGGGCGCCGATCCAACTCGGAGAGCGACGCCGAGCAACCGGAGGCCGACCGCCGCCCCCACGGGAGCGCCTACCTCGCCTACGCCGACTGA
Protein
MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLGKISGASFGALSACCLLCDLPIGEITSDVLRVVREARSGSLGPFSPSFNIQNVLLEGMEKYLPEDAHKIVSGKLHISLTRVYDGKNVIVSEFPTREDLLQAVMASCFVPVFSGLLPPRFHGIRYMDGGFSDNLPVLDENTITVSPFCGESDICPRDLSSQLFHVNLANTSIELSKQNMNRFARILFPPKPEVLSNMCKQGFDDALRFLHRNNLISCTRCLAVQSTFQLQDVLDDTTYDYDPDCEECKTHRQDALVDDLPDTVMTIFQNAIDSANNGIVNWVMKQRAVRYLNLLTLPYRVPIDIMYATFTKFVSCTPKMSKSVWKLSLNLLQQLHGFVYTSHDRSEAAARIYYKLTTEAKRETNEGHLLERRRASEFRVTYGDVRITYEDADTFEQILNVTSHHDALLAYYYLDGENKMKMTEIYDVTDADTDAVQSPTERDLNKQLEFDNDWSDELITSNEELDMEAMDDDALADRNIFSDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD

Summary

Similarity
Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
EMBL
KF724681    AHE57674.1    MF687631    ATJ44557.1    JF809663    AEJ33048.1    + More
KQ459439    KPJ01037.1    AGBW02012542    OWR44847.1    JR037406    AEY57755.1    JR037404    AEY57753.1    CH477816    EAT35954.1    KQ971338    EFA02006.1    ATLV01023934    KE525347    KFB50034.1    NEVH01025635    PNF15364.1    GFDL01002999    JAV32046.1    GFDL01001188    JAV33857.1    GFDL01002975    JAV32070.1    GFDL01002967    JAV32078.1    GANO01003236    JAB56635.1    GGFL01002948    MBW67126.1    GGFK01001589    MBW34910.1    GGFK01001587    MBW34908.1    KQ982769    KYQ50948.1    ACPB03000725    GGFJ01003303    MBW52444.1    GGFM01006768    MBW27519.1    GGFJ01003305    MBW52446.1    GBBI01003125    JAC15587.1    KQ976736    KYM76011.1    KQ759874    OAD62361.1    KQ981490    KYN41397.1    ADTU01013745    ADTU01013746    ADTU01013747    GGFJ01003304    MBW52445.1    ADMH02000120    ETN67723.1    AAAB01008986    APCN01002426    GGFL01003072    MBW67250.1    GL438128    EFN69552.1    KK107519    EZA49449.1    QOIP01000009    RLU18498.1    MH238459    AZP54623.1    GFDL01001205    JAV33840.1    KQ435740    KOX76829.1    CH379069    KRT07548.1    GBXI01015236    JAC99055.1    GBXI01002518    JAD11774.1    EAL30703.1    DS235800    EEB17217.1    CH902618    EDV39192.2    GBHO01039430    GDHC01019151    JAG04174.1    JAP99477.1    AE014296    ACZ94716.1    CH964278    EDW85390.1    CM000159    KRK01906.1    CH480815    EDW41500.1    CH954178    KQS43974.1    AY051668    AAF49704.1    AAK93092.1    EDV51783.1    EDW94528.1    GDHF01023447    GDHF01012214    GDHF01009360    JAI28867.1    JAI40100.1    JAI42954.1    GDAI01000324    JAI17279.1    GAKP01011730    GAKP01011729    JAC47223.1    GAKP01011732    JAC47220.1    CP012523    ALC38336.1    JR037407    AEY57756.1    JR037405    AEY57754.1    CH916368    EDW03163.1    CH916366    EDV97992.1    UFQS01000092    UFQT01000092    SSW99212.1    SSX19592.1    KK852614    KDR20213.1    GGFK01001739    MBW35060.1    GBRD01005825    JAG59996.1    GEBQ01020342    JAT19635.1    GEDC01030308    JAS06990.1    GEDC01030517    GEDC01016531    JAS06781.1    JAS20767.1    APGK01026024    APGK01026025    APGK01026026    APGK01026027    APGK01026028    KB740612    ENN80000.1    GEDC01019765    JAS17533.1    GECU01002535    JAT05172.1    GECZ01004491    JAS65278.1   
Pfam
PF01734   Patatin        + More
PF07885   Ion_trans_2
Interpro
IPR002641   PNPLA_dom        + More
IPR033562   PLPL       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR003280   2pore_dom_K_chnl       
IPR003092   2pore_dom_K_chnl_TASK       
IPR013099   K_chnl_dom       
SUPFAM
SSF52151   SSF52151       

Ontologies

Topology

Length:
547
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.06726
Exp number, first 60 AAs:
3.87179
Total prob of N-in:
0.12776
outside
1  -  547
 
 

Population Genetic Test Statistics

Pi
19.031629
Theta
18.140859
Tajima's D
-1.033441
CLR
1.990373
CSRT
0.128893555322234
Interpretation
Uncertain
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