SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08102  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001105
Annotation
hypothetical_protein_KGM_21242_[Danaus_plexippus]
Full name
Nitric oxide synthase-interacting protein homolog       + More
Nitric oxide synthase-interacting protein      
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase      
E3 ubiquitin-protein ligase CSU1      
Alternative Name
E3 ubiquitin-protein ligase NOSIP
RING-type E3 ubiquitin transferase NOSIP
eNOS-interacting protein
Protein COP1 SUPPRESSOR 1
RING-type E3 ubiquitin transferase CSU1
Location in the cell
Nuclear   Reliability : 2.384
 

Sequence

CDS
ATGACTCGACACGCTCGAAATTGTACAGCAGGTGCTGTGTATACATATCATGAAAAGAAAAAGGACGCTGCTGCTTCTGGCTACGGTACTCAAAGTGAACGTGTCGGAAAAGACTCCATAAAAAACTTTGATTGCTGCAGCCTAACATTACAGCCTTGTAGAAACCCTGTGGTCACAAAAGAAGGCTACTTATTCGATAAGGAAGCTATTTTAGAGTACATCATCAGTAAGAAGAACGCATATAACCGCTTATTAAAGAAATATGAGAAACAATTAAAAAAAGATGAAGTTGAAAGAGCCGAGCTTGCGGTGGCTGAAAAAGAAGCGAAACTCATTAAATTCATGAACAGGGAAAAAAATATTTCATCTACTACACCAAGTACTTCAGCTATAGAGGAAAAAACGATAAATTCAGTATCAAATATAGCGAATGGTAAAGAAAAACAGTTACCTAGTTTTTGGGTACCATCCCAACTTCCCGATGCAAAGATTTCGAAAATAGAAAAACCTGATCCAACCGTTTACTGTCCGATCAGCGGCAAACCATTGAAAATGAAGGATTTAATAGAAGTTAAGTGGACATTGGTGAATGATCCAGATGATAAGAAGTCTTTAATAGCCAAAGAAAACCGGTACATGTGTCCAGTGACACATGATATATTAAGTAATGCTGTGCCCTGCGCTGTTATCAGAACTTCAGGACATGTTGTGACAATGGAATGTGTTGAGAAAATCATAAAAAAAGATTGGTTGCATCCATTAACTGGTGAGAAACTTAAAGAAAAAGATATAATTCTACTGCAAAGAGGGGGCACTGGATATGCACTCACCAATCAAAACCTAGAAGGGAAAAATGAAAGGCCTGTTTTACAAGCGTAA
Protein
MTRHARNCTAGAVYTYHEKKKDAAASGYGTQSERVGKDSIKNFDCCSLTLQPCRNPVVTKEGYLFDKEAILEYIISKKNAYNRLLKKYEKQLKKDEVERAELAVAEKEAKLIKFMNREKNISSTTPSTSAIEEKTINSVSNIANGKEKQLPSFWVPSQLPDAKISKIEKPDPTVYCPISGKPLKMKDLIEVKWTLVNDPDDKKSLIAKENRYMCPVTHDILSNAVPCAVIRTSGHVVTMECVEKIIKKDWLHPLTGEKLKEKDIILLQRGGTGYALTNQNLEGKNERPVLQA

Summary

Description
Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity.
E3 ubiquitin-protein ligase that is essential for proper development of the forebrain, the eye, and the face (By similarity). Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity (By similarity).
E3 ubiquitin-protein ligase that is essential for proper development of the forebrain, the eye and the face. Catalyzes monoubiquitination of serine/threonine-protein phosphatase 2A (PP2A) catalytic subunit PPP2CA/PPP2CB (PubMed:25546391). Negatively regulates nitric oxide production by inducing NOS1 and NOS3 translocation to actin cytoskeleton and inhibiting their enzymatic activity (By similarity).
E3 ubiquitin-protein ligase that is essential for proper development of the forebrain, the eye, and the face. Catalyzes monoubiquitination of serine/threonine-protein phosphatase 2A (PP2A) catalytic subunit PPP2CA/PPP2CB (By similarity). Negatively regulates nitric oxide production by inducing NOS1 and NOS3 translocation to actin cytoskeleton and inhibiting their enzymatic activity (By similarity).
Negatively regulates nitric oxide production by inducing NOS1 and NOS3 translocation to actin cytoskeleton and inhibiting their enzymatic activity.
E3 ubiquitin-protein ligase that is essential for proper development of the forebrain, the eye, and the face. Catalyzes monoubiquitination of serine/threonine-protein phosphatase 2A (PP2A) catalytic subunit PPP2CA/PPP2CB (By similarity). Negatively regulates nitric oxide production by inducing NOS1 and NOS3 translocation to actin cytoskeleton and inhibiting their enzymatic activity (PubMed:11149895, PubMed:15548660, PubMed:16135813).
Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin.
RING-finger E3 ubiquitin-protein ligase that plays an major role in maintaining COP1 homeostasis in darkness. Negatively regulates COP1 protein accumulation by targeting COP1 for ubiquitination and subsequent proteasomal degradation in dark-grown seedlings. Negatively regulates the accumulation of SPA1 protein in the dark.
Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
a CDP-1,2-diacyl-sn-glycerol + sn-glycerol 3-phosphate = 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycero-3'-phosphate) + CMP + H(+)
Subunit
Interacts with NOS1 and NOS3 (By similarity). Interacts with PP2A holoenzyme, containing PPP2CA, PPP2CB, PPP2R1A and PPP2R2A subunits (PubMed:25546391).
Interacts with NOS1 and NOS3 (By similarity). Interacts with PP2A holoenzyme, containing PPP2CA, PPP2CB, PPP2R1A and PPP2R2A subunits (By similarity).
Interacts with NOS1 and NOS3 (PubMed:11149895, PubMed:15548660). Interacts with PP2A holoenzyme, containing PPP2CA, PPP2CB, PPP2R1A and PPP2R2A subunits (By similarity).
Similarity
Belongs to the NOSIP family.
Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
Keywords
Complete proteome   Cytoplasm   Nucleus   Reference proteome   Developmental protein   Transferase   Ubl conjugation pathway   Alternative splicing   Phosphoprotein   Polymorphism   Coiled coil   Metal-binding   Repeat   Zinc   Zinc-finger  
Feature
chain  Nitric oxide synthase-interacting protein homolog
splice variant  In isoform 2.
sequence variant  In dbSNP:rs17850728.
EC Number
2.7.8.5
2.3.2.27
EMBL
AGBW02012542    OWR44846.1    GDAI01001007    JAI16596.1    AAAB01008960    EAA11755.3    + More
ADMH02000773    ETN65089.1    GGFJ01007916    MBW57057.1    GBHO01036375    GBRD01010196    GDHC01001268    JAG07229.1    JAG55628.1    JAQ17361.1    DS235873    EEB19592.1    GGFJ01007917    MBW57058.1    DS232396    EDS41081.1    GEDC01026597    GEDC01011349    JAS10701.1    JAS25949.1    KQ982766    KYQ50980.1    JXUM01024455    GAPW01002974    KQ560691    JAC10624.1    KXJ81256.1    CH477233    EAT46791.1    UFQS01000784    UFQT01000784    SSX06866.1    SSX27210.1    KK107485    QOIP01000006    EZA50087.1    RLU21941.1    GEBQ01030785    GEBQ01008544    GEBQ01006888    JAT09192.1    JAT31433.1    JAT33089.1    AE014298    APGK01049566    BT128122    KB741156    AEE63083.1    ENN73545.1    GBGD01002351    JAC86538.1    AJWK01000975    AJWK01000976    ABJB010300094    ABJB010778202    ABJB010804049    DS704057    EEC05438.1    GL732530    EFX86228.1    BC061402    BC068614    AMQM01000211    KB095811    ESO12630.1    KB203534    ESO84363.1    AK007962    AK010006    BC089029    BC085409    AMQN01006514    KB298546    ELU09087.1    CAEY01000711    BC104600    KU214505    ALV82313.1    AC010619    KF456600    AF132959    BC009299    BC010077    BC011249    AB168844    AK291535    BAF84224.1    GDIQ01137296    GDIP01012981    JAL14430.1    JAM90734.1    RCHS01003767    RMX39894.1    CH477507    EAT39813.1    UZAF01020609    VDO71379.1    UYYA01004524    VDM62272.1    JH712100    EFO19847.2    KZ345355    PIO73967.1    UYYF01000121    VDM96392.1    UYRR01000768    VDK18199.1    JH818089    EKC34480.1    JXLN01018806    KPM12089.1    UYSL01020913    VDL76591.1    FO081426    UXUI01008299    VDD91128.1    DS268427    LFJK02000008    EFO93649.1    POM43146.1    UYWY01021700    VDM44713.1    UYYG01001168    VDN58472.1    JYDP01000093    KRZ08025.1    UZAD01013387    VDN94579.1    UYRW01001730    VDK80263.1    KL363189    KL367476    KFD57286.1    KFD72673.1    UZAN01043869    VDP79458.1    JYDL01000171    KRX14115.1    UZAI01020228    VDP50341.1    UZAK01032615    VDP29408.1    LN609529    CEF70471.1    GEEE01020835    GEEE01015020    GEEE01014658    JAP42390.1    JAP48205.1    UYSU01043006    VDM04121.1    UZAL01030807    VDP55640.1    GL832974    EGD76569.1    CMVM020000060    LK028578    APAU02000013    CDS18463.1    EUB62319.1    UYWX01020334    VDM31246.1    UYSG01001506    VDL45189.1    UZAE01012653    VDO06108.1    UYRS01000181    VDK22273.1    UXSR01000026    VDD74327.1    NIVC01003183    NIVC01001558    PAA52781.1    PAA66423.1    UZAO01089842    VDQ12428.1    UYRT01079253    VDN20306.1    DQ059102    AC005850    CP002684    AK117181    BT026113    AY085557    AAD25548.1    KQ257451    KND03892.1    FR823393    LN714487    CBZ56326.1    CEL71086.1    MCOG01000026    ORY75239.1    MCFE01000354    ORX90901.1    CDSF01000078    OVEO01000016    CEO97009.1    SPR00989.1    AMYB01000003    OAD04169.1    KV921349    ORE17692.1    PJQL01000217    RCH98181.1    MCFG01000618    ORX63540.1    DF836303    GAN01979.1    KV921916    ORE06811.1   
Proteomes
UP000007151    UP000007062    UP000000673    UP000009046    UP000002320    UP000075809    + More
UP000069940    UP000249989    UP000008820    UP000053097    UP000279307    UP000000803    UP000019118    UP000091820    UP000092461    UP000001555    UP000000305    UP000075901    UP000008143    UP000085678    UP000015101    UP000030746    UP000000589    UP000000437    UP000014760    UP000015104    UP000009136    UP000005640    UP000233100    UP000275408    UP000038042    UP000268014    UP000050601    UP000267027    UP000095285    UP000046394    UP000276776    UP000036680    UP000005408    UP000038043    UP000271162    UP000001940    UP000095284    UP000038041    UP000274131    UP000008281    UP000237256    UP000050794    UP000267007    UP000038040    UP000274756    UP000055024    UP000038020    UP000278627    UP000077448    UP000271087    UP000050740    UP000054630    UP000050790    UP000277204    UP000050789    UP000035682    UP000050788    UP000275846    UP000050791    UP000007799    UP000024404    UP000019149    UP000046396    UP000274429    UP000046397    UP000274504    UP000046398    UP000278807    UP000046400    UP000282613    UP000046399    UP000267029    UP000215902    UP000050795    UP000050760    UP000006548    UP000053201    UP000193920    UP000193498    UP000039324    UP000290189    UP000077051    UP000242381    UP000252139    UP000193944    UP000053815    UP000242414   
Pfam
PF04641   Rtf2        + More
PF15906   zf-NOSIP
PF13426   PAS_9
PF00010   HLH
PF00400   WD40
PF03099   BPL_LplA_LipB
PF13091   PLDc_2
PF00614   PLDc
PF14634   zf-RING_5
Interpro
IPR031790   Znf-NOSIP        + More
IPR016818   NOSIP       
IPR027799   Rtf2_RING-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR036638   HLH_DNA-bd_sf       
IPR035965   PAS-like_dom_sf       
IPR000014   PAS       
IPR001067   Nuc_translocat       
IPR011598   bHLH_dom       
IPR003613   Ubox_domain       
IPR020472   G-protein_beta_WD-40_rep       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR004143   BPL_LPL_catalytic       
IPR016270   PGS1       
IPR025202   PLD-like_dom       
IPR001736   PLipase_D/transphosphatidylase       
IPR017907   Znf_RING_CS       
IPR001841   Znf_RING       
IPR011011   Znf_FYVE_PHD       
SUPFAM
SSF47459   SSF47459        + More
SSF55785   SSF55785       
SSF50978   SSF50978       
SSF57903   SSF57903       
Gene 3D

Ontologies

Topology

Subcellular location
Nucleus  
Cytoplasm  
Mitochondrion  
Nucleus speckle   Is recruited to nuclear speckles by COP1 in the dark.   With evidence from 3 publications.
Length:
292
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00823
Exp number, first 60 AAs:
0
Total prob of N-in:
0.25705
outside
1  -  292
 
 

Population Genetic Test Statistics

Pi
14.453129
Theta
18.654913
Tajima's D
-0.927279
CLR
1.000563
CSRT
0.144442777861107
Interpretation
Uncertain
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