Pre Gene Modal
BGIBMGA001054
Annotation
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_46_isoform_X1_[Bombyx_mori]
Full name
Ubiquitin carboxyl-terminal hydrolase 46
+ More
Ubiquitin carboxyl-terminal hydrolase 12
Ubiquitin carboxyl-terminal hydrolase 12A
Ubiquitin carboxyl-terminal hydrolase 12-A
Ubiquitin carboxyl-terminal hydrolase 12-B
Ubiquitin carboxyl-terminal hydrolase 4
Ubiquitin carboxyl-terminal hydrolase 3
Palmitoyltransferase
Probable ubiquitin carboxyl-terminal hydrolase creB
Alternative Name
Deubiquitinating enzyme 46
Ubiquitin thioesterase 46
Ubiquitin-specific-processing protease 46
Deubiquitinating enzyme 12
Ubiquitin thioesterase 12
Ubiquitin-hydrolyzing enzyme 1
Ubiquitin-specific-processing protease 12
Deubiquitinating enzyme 12A
Ubiquitin thioesterase 12A
Ubiquitin-specific-processing protease 12A
Deubiquitinating enzyme 12-A
Ubiquitin thioesterase 12-A
Ubiquitin-specific-processing protease 12-A
Deubiquitinating enzyme 12-B
Ubiquitin thioesterase 12-B
Ubiquitin-specific-processing protease 12-B
Deubiquitinating enzyme
Ubiquitin thioesterase
Ubiquitin-specific-processing protease
Deubiquitinating enzyme 4
Ubiquitin thioesterase 4
Ubiquitin-specific-processing protease 4
Deubiquitinating enzyme 3
Ubiquitin thioesterase 3
Ubiquitin-specific-processing protease 3
Carbon catabolite repression protein B
Deubiquitinating enzyme creB
Ubiquitin thioesterase creB
Ubiquitin-hydrolyzing enzyme creB
Ubiquitin-specific-processing protease creB
Location in the cell
Nuclear   Reliability : 3.525
Sequence
CDS
ATGTCAATATGTCAGGATTTTGGCCTTAATTTCCAGCATAGAATGGGCGCAAATATATCACAGTTGGAAAGAGATATCGGGTCAGAGCAGTTCCCACCTAACGAACATTATTTCGGATTAGTCAATTTTGGCAACACTTGTTACAGCAACTCAGTGTTGCAAGCTTTATATTTTTGTCGCCCATTCAGAGAGAAAGTATTAGAGTACAAAGCTAAGAATAAAAGGACCAAGGAAACTCTATTAACATGCCTGGCAGATTTATTTTATAGCATAGCTACTCAAAAGAAAAAAGTTGGATCAATTGCACCTAAAAAATTTATTGCTAGACTTAGGAAGGAAAAGGAGGAATTTGACAATTACATGCAACAAGATGCCCATGAATTCCTGAACTTCCTAATAAATCATATTAATGAAATTATTTTAGCGGAACGTAATCAAAGCACATTAAAAGTTCAAAAGAACAACTCCGGTGAGAATGTGACGTGTAATGGTTCAGTGCCTCACAACACTGAACCGACTTGGGTGCACGAAATATTCCAAGGAACATTAACAAGCGAGACGAGGTGTCTCAACTGTGAGACGGTCAGCAGTAAAGATGAGCATTTCTTTGATTTACAGGTGGACGTGGGTCAAAACACGAGCATCACGCACTGCCTCAAGTGCTTCAGCGACACGGAGACGCTTTGCAACGACAACAAGTTCAAGTGTGACAACTGCAGCAGCTACCAGGAGGCGCAGAAGCGGATGCGCGTGAAGAAGCTTCCCCTCATCCTCGCCCTGCACCTCAAGAGGTTCAAATACATGGAACAGTTTAACCGGCACATCAAGGTGTCGCATCGCGTTGTGTTCCCATTAGAACTGAGATTATTTAATACGTCTGACGACGCTGTGAATCCGGATCGTCTGTACGACCTGGTGGCCGTGGTGGTGCACTGCGGCTCCGGCCCGAACCGGGGCCACTACATCAGCATCGTCAAGAGTCACGGCTTCTGGCTGCTGTTCGACGATGACATGGTTGATAAAATAGATGCATCAGCTATAGAAGACTTTTACGGCCTAACTTCAGACATACAGAAATCGTCCGAAACAGGATACATACTATTTTATCAGTCTAGGGACGCTAGTTGTTAA
Protein
MSICQDFGLNFQHRMGANISQLERDIGSEQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSSETGYILFYQSRDASC
Summary
Description
Deubiquitinating enzyme that plays a role in behavior, possibly by regulating GABA action (By similarity). Has almost no deubiquitinating activity by itself and requires the interaction with wdr48 to have a high activity (By similarity).
Deubiquitinating enzyme that plays a role in behavior, possibly by regulating GABA action. May act by mediating the deubiquitination of GAD1/GAD67 (By similarity). Has almost no deubiquitinating activity by itself and requires the interaction with WDR48 to have a high activity. Not involved in deubiquitination of monoubiquitinated FANCD2 (By similarity).
Deubiquitinating enzyme that plays a role in behavior, possibly by regulating GABA action. May act by mediating the deubiquitination of GAD1/GAD67 (PubMed:19465912). Has almost no deubiquitinating activity by itself and requires the interaction with WDR48 to have a high activity. Not involved in deubiquitination of monoubiquitinated FANCD2 (By similarity).
Deubiquitinating enzyme that plays a role in behavior, possibly by regulating GABA action. May act by mediating the deubiquitination of GAD1/GAD67 (By similarity). Has almost no deubiquitinating activity by itself and requires the interaction with WDR48 to have a high activity (PubMed:19075014, PubMed:26388029). Not involved in deubiquitination of monoubiquitinated FANCD2 (PubMed:19075014).
Deubiquitinating enzyme. Has almost no deubiquitinating activity by itself and requires the interaction with WDR48 to have a high activity. Not involved in deubiquitination of monoubiquitinated FANCD2.
Deubiquitinating enzyme. Has almost no deubiquitinating activity by itself and requires the interaction with WDR20 and WDR48 to have a high activity (PubMed:19075014, PubMed:27373336). Not involved in deubiquitination of monoubiquitinated FANCD2 (PubMed:19075014). In complex with WDR48, acts as a potential tumor suppressor by positively regulating PHLPP1 stability (PubMed:24145035).
Deubiquitinating enzyme. Has almost no deubiquitinating activity by itself and requires the interaction with wdr48 to have a high activity.
Regulates the abundance of the glr-1 glutamate receptor in the ventral nerve cord by promoting its deubiquitination and preventing its degradation in the lysosome. Contributes to the regulation of embryonic polarity.
Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Required for the correct development of pollen.
Ubiquitin thioesterase component of the regulatory network controlling carbon source utilization through ubiquitination and deubiquitination involving creA, creB, creC, creD and acrB. Deubiquitinates the creA catabolic repressor and the quinate permease qutD. Plays also a role in response to carbon starvation and the control of extracellular proteases activity (By similarity).
Catalytic Activity
Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).
hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein]
Subunit
Interacts with WDR48.
Interacts with WDR48. Interacts with WDR20.
Interacts with WDR48 (PubMed:19075014, PubMed:26388029). Interacts with WDR20 (PubMed:20147737).
Interacts with WDR48. Interacts with WDR20. Component of the USP12/WDR20/WDR48 deubiquitinating complex.
Interacts with WDR48 (PubMed:19075014, PubMed:27650958, PubMed:27373336). Interacts with WDR20 (PubMed:20147737, PubMed:27373336). Component of the USP12/WDR20/WDR48 deubiquitinating complex (PubMed:20147737, PubMed:27373336). Interacts with PHLPP1 (PubMed:24145035).
Interacts with wdr-20 and wdr-48; the catalytic activity of usp-46 is increased in the presence of both wdr-20 and wdr-48. Interacts with glr-1; the interaction results in deubiquitination of glr-1.
Interacts with creA, creC and qutD.
Miscellaneous
Knockdown of USP12 increases Akt activation.
Similarity
Belongs to the peptidase C19 family. USP12/USP46 subfamily.
Belongs to the peptidase C19 family.
Belongs to the DHHC palmitoyltransferase family.
Keywords
Behavior
Complete proteome
Hydrolase
Metal-binding
Protease
Reference proteome
Thiol protease
Ubl conjugation pathway
Zinc
Alternative splicing
3D-structure
Polymorphism
Cytoplasm
Lipoprotein
Myristate
Nucleus
Coiled coil
Feature
chain Ubiquitin carboxyl-terminal hydrolase 46
splice variant In isoform 2.
sequence variant In dbSNP:rs17475800.
EC Number
3.4.19.12
2.3.1.225
PDB
5L8W
E-value=1.48795e-153,
Score=1392
Ontologies
Topology
Subcellular location
Perikaryon
Cytoplasm
Nucleus
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0320500000000001
Exp number, first 60 AAs:
0.02854
Total prob of N-in:
0.00623
Population Genetic Test Statistics