Gene

KWMTBOMO08098  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001107

Annotation

DNA_supercoiling_factor_[Bombyx_mori]

Location

Bomo_Chr13(-):15941402-15941986      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.77

CDS

ATGTTGAGGTCTTTCTTTGTGCTATTGGCAATTTCGATGGTGTTCGCGGGAGTCCCAACGAATGAAGAGACGAAGAGGTTGATGGATCATCTGTCTGATGCTGAACATTATCGCAATGAGCATCATAACAAGCAGTTTGATCATGACGCCTTTTTGGGAGAGGACCAGGCCAAAACTTTCGATCAACTATCACCCGAAGAAAGTAAGAGGAGACTTGGGTAA

Protein

MLRSFFVLLAISMVFAGVPTNEETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLG

Uniprot

G9FL14   Q93136   A0A0L7KR51   A0A0L7KVJ5   A0A2H1WQL7   A0A2A4JW54   + More
A0A212EX33   A0A194Q7Q8   A0A194RF50   S4PSB2   A0A3S2PK98   A0A1L8DM74   A0A1L8DJ43   A0A1L8DMJ3   A0A1B0DFV7   A0A336MZW7   A0A336MY53   A0A336L354   A0A2P8Y066   A0A0U4C4S4   U5EW90   R4UN97   A0A182MFS9   A0A182XFN2   A0A182W8B6   A0A182YE68   A0A1W4X982   A0A0P5ZYX9   A0A182VP64   A0A182LN58   Q7QDS4   A0A182HX52   A0A084VJI4   A0A182R8X5   A0A182P1A0   A0A1W7R9T7   A0A182K9R5   A0A0P6EMH6   A0A1B6E6K0   A0A182J1Q4   A0A0P5R4Y8   A0A0N8E4X5   A0A0P5YZW3   A0A0P5HW79   A0A0P5U7C8   A0A0C9RE82   A0A0P4ZEJ1   A0A0P5LXP9   D2A169   A0A0P5IU57   A0A023EQT3   A0A0P6FRM4   A0A182Q3Y8   Q0IEY6   A0A0P5UAS3   A0A0P6BZB7   A0A0P5RJC3   A0A1J1I4B8   E9HK57   A0A182NVC3   A0A0P5FFA2   A0A182SIW5   B0W572   A0A0B7A6Z7   A0A1B6FGF5   J3JXB0   A0A182FLY7   A0A1Q3FMF4   A0A1Q3FML7   A0A2M4BUB1   W5JBJ4   A0A1I8ME40   A0A2M4AWK1   A0A2T7NAN2   A0A2R2MS28   A0A0P5NTK2   A0A1Y1K6Q0   A0A1B6JBP5   A0A2J7Q112   A0A067RB55   A0A224XN57   A0A1B6HBB1   A0A0B7A4V7   A0A0B7A268   A0A0P5Z2X6   E2BD80   A0A1B6MN73   A0A1B0GHS9   T1PA24   E0VBH5   A0A0T6B3A3   A7SUH8   A0A3S3PSU2   A0A1W7R9T9   A0A1W5A5Y9   A0A1W5AD31  

Pubmed

19121390    7797553    26227816    22118469    26354079    23622113    + More
29403074    26694822    25244985    20966253    12364791    14747013    17210077    24438588    18362917    19820115    24945155    26483478    17510324    21292972    22516182    23537049    20920257    23761445    25315136    28004739    24845553    20798317    20566863    17615350   

EMBL

BABH01000173    JN171664    AEO79985.1    D49948    BAA08704.1    JTDY01006698    + More
KOB65762.1    JTDY01005173    KOB67292.1    ODYU01009967    SOQ54734.1    NWSH01000457    PCG76267.1    AGBW02011840    OWR46049.1    KQ459439    KPJ01030.1    KQ460297    KPJ16212.1    GAIX01014008    JAA78552.1    RSAL01000009    RVE53846.1    GFDF01006525    JAV07559.1    GFDF01007608    JAV06476.1    GFDF01006524    JAV07560.1    AJVK01059049    UFQS01000917    UFQT01000917    UFQT01003723    SSX07649.1    SSX35225.1    SSX35226.1    SSX07650.1    SSX27988.1    SSX35227.1    PYGN01001092    PSN37652.1    KU218683    ALX00063.1    GANO01000671    JAB59200.1    KC740801    AGM32625.1    AXCM01001696    GDIP01037810    JAM65905.1    AAAB01008849    EAA07240.3    APCN01005137    ATLV01013581    KE524868    KFB38128.1    GFAH01000484    JAV47905.1    GDIQ01061469    JAN33268.1    GEDC01031670    GEDC01029371    GEDC01017660    GEDC01004022    GEDC01003728    GEDC01001923    JAS05628.1    JAS07927.1    JAS19638.1    JAS33276.1    JAS33570.1    JAS35375.1    AXCP01007332    GDIQ01125346    JAL26380.1    GDIQ01061468    JAN33269.1    GDIP01050821    JAM52894.1    GDIQ01222116    JAK29609.1    GDIP01117052    JAL86662.1    GBYB01011462    JAG81229.1    GDIP01214750    JAJ08652.1    GDIQ01259443    GDIQ01166488    GDIP01050820    LRGB01001361    JAK85237.1    JAM52895.1    KZS12723.1    KQ971338    EFA02623.1    GDIQ01210471    JAK41254.1    JXUM01101857    JXUM01101858    GAPW01002619    JAC10979.1    GDIQ01061470    JAN33267.1    AXCN02002295    CH477461    EAT40554.1    GDIP01115661    JAL88053.1    GDIP01011990    JAM91725.1    GDIQ01119102    JAL32624.1    CVRI01000040    CRK95133.1    GL732667    EFX67825.1    GDIQ01258821    JAJ92903.1    DS231841    EDS34819.1    HACG01029557    CEK76422.1    GECZ01020481    JAS49288.1    BT127879    KB632390    AEE62841.1    ERL94530.1    GFDL01006320    JAV28725.1    GFDL01006319    JAV28726.1    GGFJ01007390    MBW56531.1    ADMH02001606    ETN61842.1    GGFK01011856    MBW45177.1    PZQS01000018    PVD18240.1    GDIQ01140349    JAL11377.1    GEZM01091041    GEZM01091040    JAV57132.1    GECU01011060    JAS96646.1    NEVH01019960    PNF22278.1    KK852761    KDR16997.1    GFTR01005178    JAW11248.1    GECU01035715    GECU01035055    GECU01034243    GECU01024945    GECU01021570    GECU01021011    GECU01005931    JAS71991.1    JAS72651.1    JAS73463.1    JAS82761.1    JAS86136.1    JAS86695.1    JAT01776.1    HACG01028135    CEK75000.1    HACG01028134    CEK74999.1    GDIP01049969    JAM53746.1    GL447585    EFN86308.1    GEBQ01002658    JAT37319.1    AJWK01005593    KA645539    AFP60168.1    DS235030    EEB10731.1    LJIG01016193    KRT81335.1    DS469813    EDO32638.1    NCKU01003397    NCKU01003395    RWS07593.1    RWS07604.1    GFAH01000485    JAV47904.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053268    UP000053240    + More
UP000283053    UP000092462    UP000245037    UP000075883    UP000076407    UP000075920    UP000076408    UP000192223    UP000075903    UP000075882    UP000007062    UP000075840    UP000030765    UP000075900    UP000075885    UP000075881    UP000075880    UP000076858    UP000007266    UP000069940    UP000075886    UP000008820    UP000183832    UP000000305    UP000075884    UP000075901    UP000002320    UP000030742    UP000069272    UP000000673    UP000095301    UP000245119    UP000085678    UP000235965    UP000027135    UP000008237    UP000092461    UP000009046    UP000001593    UP000285301    UP000192224   

PRIDE

G9FL14    Q93136   

Pfam

PF13499   EF-hand_7        + More
PF13202   EF-hand_5
PF13833   EF-hand_8

Interpro

IPR018247   EF_Hand_1_Ca_BS        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR027239   Calumenin       

SUPFAM

SSF47473   SSF47473       

ProteinModelPortal

G9FL14   Q93136   A0A0L7KR51   A0A0L7KVJ5   A0A2H1WQL7   A0A2A4JW54   + More
A0A212EX33   A0A194Q7Q8   A0A194RF50   S4PSB2   A0A3S2PK98   A0A1L8DM74   A0A1L8DJ43   A0A1L8DMJ3   A0A1B0DFV7   A0A336MZW7   A0A336MY53   A0A336L354   A0A2P8Y066   A0A0U4C4S4   U5EW90   R4UN97   A0A182MFS9   A0A182XFN2   A0A182W8B6   A0A182YE68   A0A1W4X982   A0A0P5ZYX9   A0A182VP64   A0A182LN58   Q7QDS4   A0A182HX52   A0A084VJI4   A0A182R8X5   A0A182P1A0   A0A1W7R9T7   A0A182K9R5   A0A0P6EMH6   A0A1B6E6K0   A0A182J1Q4   A0A0P5R4Y8   A0A0N8E4X5   A0A0P5YZW3   A0A0P5HW79   A0A0P5U7C8   A0A0C9RE82   A0A0P4ZEJ1   A0A0P5LXP9   D2A169   A0A0P5IU57   A0A023EQT3   A0A0P6FRM4   A0A182Q3Y8   Q0IEY6   A0A0P5UAS3   A0A0P6BZB7   A0A0P5RJC3   A0A1J1I4B8   E9HK57   A0A182NVC3   A0A0P5FFA2   A0A182SIW5   B0W572   A0A0B7A6Z7   A0A1B6FGF5   J3JXB0   A0A182FLY7   A0A1Q3FMF4   A0A1Q3FML7   A0A2M4BUB1   W5JBJ4   A0A1I8ME40   A0A2M4AWK1   A0A2T7NAN2   A0A2R2MS28   A0A0P5NTK2   A0A1Y1K6Q0   A0A1B6JBP5   A0A2J7Q112   A0A067RB55   A0A224XN57   A0A1B6HBB1   A0A0B7A4V7   A0A0B7A268   A0A0P5Z2X6   E2BD80   A0A1B6MN73   A0A1B0GHS9   T1PA24   E0VBH5   A0A0T6B3A3   A7SUH8   A0A3S3PSU2   A0A1W7R9T9   A0A1W5A5Y9   A0A1W5AD31  

KEGG

692759    no KO assigned | (RefSeq) scf; DNA supercoiling factor

GO

GO:0005509   GO:0005783   GO:0016021  

PANTHER

PTHR10827:SF76  

SignalP

Position:   1 - 16,         Likelihood:  0.986654

 

 

Length:

73

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.67966

Exp number, first 60 AAs:

3.67966

Total prob of N-in:

0.16750

outside

1  -  73

 

 

Pi

27.708582

Theta

21.5092

Tajima's D

0.878959

CLR

0

CSRT

0.635268236588171

Interpretation

Uncertain