SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08094  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001052
Annotation
hypothetical_protein_RR48_00091?_partial_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.71 Mitochondrial   Reliability : 1.66
 

Sequence

CDS
ATGTGGCTCACTGACAAACTTACTAGATATGAGCCCTACGGCCTCCAATTCGAACAGGCTTTAATCAGGAAGCCCCTAAGAGAGCACGAGAAGCCACAGGACCTGCGCAACGTTCCCGGAACCCCTGGCGTGGACTACCCCATCTACCACTCCGTTCCGGAGACTCGATTCTCGTGTGAGCACGTGCCGATACACCCTGGAATGTACGCGAACGTTGAAACTGGATGTCAAGTGAGATCCATTTTAAATTACAAATAA
Protein
MWLTDKLTRYEPYGLQFEQALIRKPLREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCEHVPIHPGMYANVETGCQVRSILNYK

Summary

Pfam
PF01607   CBM_14        + More
PF05335   DUF745
Interpro
IPR002557   Chitin-bd_dom        + More
IPR036508   Chitin-bd_dom_sf       
IPR007999   DUF745       
IPR007527   Znf_SWIM       
SUPFAM
SSF57625   SSF57625       

Ontologies

Topology

Length:
85
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00041
Exp number, first 60 AAs:
0
Total prob of N-in:
0.53849
inside
1  -  85
 
 

Population Genetic Test Statistics

Pi
13.369955
Theta
17.22707
Tajima's D
-0.159329
CLR
0
CSRT
0.328483575821209
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
23174119 -.YLNTGGLLALTGAK.- 100.00 5e-09
23174119 -.NVPGTPGVDYPIYHSVPETR.- 100.00 4e-04
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