SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08092
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 1.898
 

Sequence

CDS
ATGGTCAGGCATATTCGAAGTGGCTTGCCATCTTGCCCAGTTCTGCTTCTAAACTGTCATAGATTACGGCTTCTTAAACTACTACTACTACCACTACTACTACTACCACTACTACTACCACTACTACTACTACCACTACTACTACTACCACTACTACTACCACTACTACTACTACCACTACTACTACTACCATTACTACCACTACCACTACTAATACTACTACTCTGA
Protein
MVRHIRSGLPSCPVLLLNCHRLRLLKLLLLPLLLLPLLLPLLLLPLLLLPLLLPLLLLPLLLLPLLPLPLLILLL

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
75
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.13156
Exp number, first 60 AAs:
30.61705
Total prob of N-in:
0.90757
POSSIBLE N-term signal
sequence
inside
1  -  24
TMhelix
25  -  47
outside
48  -  51
TMhelix
52  -  74
inside
75  -  75
 
 

Population Genetic Test Statistics

Pi
27.6685
Theta
26.610807
Tajima's D
0.122019
CLR
0
CSRT
0.407629618519074
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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