Gene

KWMTBOMO08077

Pre Gene Modal

BGIBMGA001111

Annotation

PREDICTED:_nephrin-like_isoform_X1_[Papilio_polytes]

Location

Bomo_Chr13(-):14648192-14695819      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.667

CDS

ATGACCATTGTTTCAGAATTACCAGAGAAGCCAAAAATATATGATGACTTGGACAAGGAAATCGTCGGTGTGGCGGGGCCCTACAGAGAAGACACGAATCTCAAACTTACCTGTGTTGTAAGTGGAGGTAGACCGATGCCTCGACTTCGTTGGTGGAGAGACGAAAAACTGGTGGCAACCCTAGCGCCACTAGAAGACGGAACGAGAATAAGTATGTTGGAGCTGAATATACCGAAGCTAACTAGGGATTTTTATGAAGCTGTGTACACTTGTACTGCGGATAACACCTTGCTTGTGCCTCCGTTGCGGGTCAACGTACAGATTCAACTATATTTACGTCCACTCCTCGTTGAGATACTAGCAAGGGAGCAGCCGCTATCCGTGGGGCAGACAGCCGAATTGACCTGCAGGGCAGTTGGGGCGAGACCGCCGGCGATGATTACTTGGTGGCTGGATAGTTCACAGCTAGCTAAAGAAGCTATTCAGAAGGATTCGGAAGACCGCAACGAAACCGTTTCCGTACTGCGGTGGACGCCACAGATGGGCCACAACGGGCACACGTTGACCTGCCGGGCGGCGCATACGATTCTCGACCATACCACCATAGAAACAAGCATGAGTTTAAATTTACACTACGTACCGATAGTTAAATTAAGACTCGGCTCAAAATTGAACCCTAACGATATTGAAGAAGGCGACGACGTGTACTTCGAATGCGTGGTCGAAGCAAATCCACCGGCTTACAAAGTTGTATGGGAACATAATGGTCAAATTATGGCACACAATCAACGGGCCGGTGTTATAGCTGGACCGGCCCATTTGGCTCTGCAGAGCGTCGCCAAAGAACAATCTGGAAGGTATTCTTGTACGGCTTCAAACGTCGAAGGCGACGGTCGATCATCACCATTCAATCTCCAAGTTATATATAAGCCAGTTTGCAAAAACCAACACACCATGGTCGTCGGAGCTGCTATCAATGAACCAGCAAGCGTGAAATGTGATGTCGACGCGTTTCCACCCCCTAAGAACTTTCAATGGACTCTCAATAACTCTATGGGCACTGTGGATATAGAACCAAGTAAATTTACGGTTGATAATATCGGCCGATCAGTCCTCACTTACACAGCGACAACAGAAAGTGATTATGGATCGTTAACCTGCCGAGCCACAAACATGGCTGGACAGCAAATGGACCCATGCCGATATACTCTGCTCCCAGCCGTAAAACCGGATCAGCCATTCAATTGCACCACTTTAAATTTGACTGACGATTCTGCTGAGCTTCGATGTGTTGCCGGTTATGACGGCGGACTCCACACCACATACATTGTGGAAGTATGGGAGACAGGAAATCTAATAGCAAACGTGTCGTCATCAGTTCCAGTTTGGAAATTAGATGATCTTGGTTCAGGAAAAGCGTTAAAATTGTACTTCTACGCACACAATGCCAGGGGAAGATCAGACATCACCAAATTAAGAGTGCATACATTGTCACGTTTAGCTTTACATACTGAAGCGAAGACCACGGAAGTCCAAATTGACAGGAATTGGCTACTTGCGGCAATCGCTGTGGCTGTTTGCGTGTTAGTCGCAACTATATCTTTGGCTCTTTGGGCAAGAAGAAGACAACACAGACCAATGCAGTATGAAGCGCCGATACAGACGGTGAAAGCGTATAAAGGCTCCTTGCATAGCACACATCATTCACCGCTCCAGCCGGACGATAAGAATCCTGACGTTGTACCTCTCGGCAAAGATTTTCACTGCACACACGACATCGAGCGACCTCCCGAGCCGCCCCCATACGGCGCGGTGGTTTCTCCGCCAGTGGGCGTCTCAAGGAGTGCTCACAGTCTCCAACATGACGTGAGGTCGAATACACCTCACACTCCGAACACACCGGCTTCTGATGCTCAGAGCATCGGAACGCTAGCAGATGATCGTCGCAGTGTTACAAGCGTTGGTCATCCGGAAGACTAA

Protein

MTIVSELPEKPKIYDDLDKEIVGVAGPYREDTNLKLTCVVSGGRPMPRLRWWRDEKLVATLAPLEDGTRISMLELNIPKLTRDFYEAVYTCTADNTLLVPPLRVNVQIQLYLRPLLVEILAREQPLSVGQTAELTCRAVGARPPAMITWWLDSSQLAKEAIQKDSEDRNETVSVLRWTPQMGHNGHTLTCRAAHTILDHTTIETSMSLNLHYVPIVKLRLGSKLNPNDIEEGDDVYFECVVEANPPAYKVVWEHNGQIMAHNQRAGVIAGPAHLALQSVAKEQSGRYSCTASNVEGDGRSSPFNLQVIYKPVCKNQHTMVVGAAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCVAGYDGGLHTTYIVEVWETGNLIANVSSSVPVWKLDDLGSGKALKLYFYAHNARGRSDITKLRVHTLSRLALHTEAKTTEVQIDRNWLLAAIAVAVCVLVATISLALWARRRQHRPMQYEAPIQTVKAYKGSLHSTHHSPLQPDDKNPDVVPLGKDFHCTHDIERPPEPPPYGAVVSPPVGVSRSAHSLQHDVRSNTPHTPNTPASDAQSIGTLADDRRSVTSVGHPED

Uniprot

A0A437BPB1   A0A194QC59   A0A194RCY1   A0A212EPF2   A0A2W1C0R4   A0A0L7L3B9   + More
A0A194RDG7   A0A194Q659   A0A2W1BFG7   A0A212FKE7   A0A2R7WZ49   C8VV84   W8AZH0   A4IJ60   E1JII4   B4KAI7   A0A0Q9WPR8   B4GLE2   A0A0Q9X4G1   A0A0A9ZA85   A0A3B0KEL4   B4PLG0   Q0KI85   B3LZ81   A0A1W4UT22   B4HIF4   D6WPK0   B3NZK0   A0A0M5IZH3   A0A146LYE1   A0A0A9XSS5   A0A336LM08   E0VMK9   A0A0C9PXU9   A0A0C9R081   A0A084VRP7   A0A0C9QIG5   A0A1S4GDS9   A0A182XU94   A0A182II24   A0A154PQL6   A0A1B6DTE2   A0A195F9V8   B5DVI0   A0A3L8D540   A0A088AEQ8   Q7PUJ2   A0A158NCS0   K7J3W1   A0A026WZS6   A0A0M9ABL7   A0A195EAN5   A0A2A3EAV1   A0A151HZS0   A0A1J1IGK9   A0A2S2NL76   A0A1S3D0I8   A0A232FD16   A0A146L2A9   A0A2S2QDI2   A0A0L7RI46   A0A0R1E7Z3   A0A1W4WET1   A0A146KUX4   A0A1B6LVG0   A0A0A9ZBH5   A0A0K8T359   A0A1B6K7I5   A0A1B6E423   A0A0L7R1X5   A0A195F1E7   A0A195BZ09   A0A195CUH2   A0A158NBW9   A0A139WE76   A0A195BEU7   A0A151XG26   A0A1B6DSZ0   E0VML7   A0A158P3L9   A0A151J259   A0A1J1HNF9   A0A437BXX4   A0A1B6M7V2   A0A1B6KUS5   A0A139WEJ5   A0A088A620   A0A139WEC1   N6TZI3   A0A3L8DTT2   A0A026X112   B0WA44   A0A1W4WI94   A0A195FL54  

Pubmed

26354079    22118469    28756777    26227816    24495485    10731132    + More
12537568    12537572    12537573    12537574    16110336    17569856    17569867    17994087    25401762    26823975    17550304    18362917    19820115    20566863    24438588    12364791    15632085    30249741    21347285    20075255    24508170    28648823    23537049   

EMBL

RSAL01000023    RVE52253.1    KQ459439    KPJ01021.1    KQ460397    KPJ15324.1    + More
AGBW02013464    OWR43372.1    KZ149891    PZC79087.1    JTDY01003187    KOB69998.1    KPJ15325.1    KPJ01023.1    KZ150099    PZC73538.1    AGBW02008062    OWR54211.1    KK856079    PTY24802.1    BT099830    ACV91668.1    GAMC01016297    GAMC01016296    GAMC01016295    JAB90258.1    BT030418    ABO52838.1    AE014297    ACZ94883.1    CH933806    EDW15700.2    CH940650    KRF83023.1    CH479185    EDW38366.1    CH964272    KRF99985.1    GBHO01004899    GBRD01005769    GDHC01012855    JAG38705.1    JAG60052.1    JAQ05774.1    OUUW01000007    SPP83491.1    CM000160    EDW96867.2    ABI31162.1    CH902617    EDV43008.2    CH480815    EDW42669.1    KQ971354    EFA06209.2    CH954181    EDV49573.1    CP012526    ALC45674.1    GDHC01005991    JAQ12638.1    GBHO01019822    JAG23782.1    UFQS01000043    UFQT01000043    SSW98369.1    SSX18755.1    DS235315    EEB14615.1    GBYB01006328    JAG76095.1    GBYB01000378    GBYB01001375    JAG70145.1    JAG71142.1    ATLV01015761    ATLV01015762    KE525036    KFB40641.1    GBYB01000377    JAG70144.1    AAAB01008987    APCN01002092    APCN01002093    KQ435007    KZC13410.1    GEDC01008360    GEDC01006854    JAS28938.1    JAS30444.1    KQ981727    KYN37161.1    CM000070    EDY68591.2    QOIP01000014    RLU14968.1    EAA01423.6    ADTU01011685    ADTU01011686    ADTU01011687    ADTU01011688    ADTU01011689    ADTU01011690    ADTU01011691    ADTU01011692    ADTU01011693    ADTU01011694    AAZX01000985    AAZX01008934    KK107061    EZA61348.1    KQ435710    KOX79819.1    KQ979236    KYN22176.1    KZ288301    PBC28857.1    KQ976642    KYM78678.1    CVRI01000048    CRK98676.1    GGMR01005320    MBY17939.1    NNAY01000395    OXU28681.1    GDHC01016570    JAQ02059.1    GGMS01006538    MBY75741.1    KQ414588    KOC70468.1    KRK03415.1    GDHC01021667    GDHC01018531    JAP96961.1    JAQ00098.1    GEBQ01012338    JAT27639.1    GBHO01002348    GDHC01008300    JAG41256.1    JAQ10329.1    GBRD01006221    JAG59600.1    GECU01000294    JAT07413.1    GEDC01004618    JAS32680.1    KQ414667    KOC64862.1    KQ981880    KYN33924.1    KQ976394    KYM93153.1    KQ977304    KYN03789.1    ADTU01011432    ADTU01011433    ADTU01011434    ADTU01011435    ADTU01011436    ADTU01011437    ADTU01011438    KYB26260.1    KQ976500    KYM83116.1    KQ982174    KYQ59329.1    GEDC01008496    JAS28802.1    EEB14623.1    ADTU01008247    ADTU01008248    ADTU01008249    ADTU01008250    ADTU01008251    ADTU01008252    ADTU01008253    ADTU01008254    ADTU01008255    KQ980493    KYN15817.1    CVRI01000012    CRK89491.1    RSAL01000001    RVE55298.1    GEBQ01007979    JAT31998.1    GEBQ01024973    JAT15004.1    KYB26261.1    KYB26262.1    APGK01045684    APGK01045685    APGK01045686    APGK01045687    APGK01045688    KB741037    ENN74695.1    QOIP01000004    RLU23791.1    KK107036    EZA61977.1    DS231868    EDS40777.1    KQ981491    KYN40997.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000007151    UP000037510    UP000000803    + More
UP000009192    UP000008792    UP000008744    UP000007798    UP000268350    UP000002282    UP000007801    UP000192221    UP000001292    UP000007266    UP000008711    UP000092553    UP000009046    UP000030765    UP000076407    UP000075840    UP000076502    UP000078541    UP000001819    UP000279307    UP000005203    UP000007062    UP000005205    UP000002358    UP000053097    UP000053105    UP000078492    UP000242457    UP000078540    UP000183832    UP000079169    UP000215335    UP000053825    UP000192223    UP000078542    UP000075809    UP000019118    UP000002320   

PRIDE

Q0KI85   

Pfam

PF08205   C2-set_2        + More
PF07686   V-set
PF13895   Ig_2
PF00041   fn3
PF00047   ig

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR036116   FN3_sf       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013162   CD80_C2-set       
IPR013783   Ig-like_fold       
IPR003961   FN3_dom       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A437BPB1   A0A194QC59   A0A194RCY1   A0A212EPF2   A0A2W1C0R4   A0A0L7L3B9   + More
A0A194RDG7   A0A194Q659   A0A2W1BFG7   A0A212FKE7   A0A2R7WZ49   C8VV84   W8AZH0   A4IJ60   E1JII4   B4KAI7   A0A0Q9WPR8   B4GLE2   A0A0Q9X4G1   A0A0A9ZA85   A0A3B0KEL4   B4PLG0   Q0KI85   B3LZ81   A0A1W4UT22   B4HIF4   D6WPK0   B3NZK0   A0A0M5IZH3   A0A146LYE1   A0A0A9XSS5   A0A336LM08   E0VMK9   A0A0C9PXU9   A0A0C9R081   A0A084VRP7   A0A0C9QIG5   A0A1S4GDS9   A0A182XU94   A0A182II24   A0A154PQL6   A0A1B6DTE2   A0A195F9V8   B5DVI0   A0A3L8D540   A0A088AEQ8   Q7PUJ2   A0A158NCS0   K7J3W1   A0A026WZS6   A0A0M9ABL7   A0A195EAN5   A0A2A3EAV1   A0A151HZS0   A0A1J1IGK9   A0A2S2NL76   A0A1S3D0I8   A0A232FD16   A0A146L2A9   A0A2S2QDI2   A0A0L7RI46   A0A0R1E7Z3   A0A1W4WET1   A0A146KUX4   A0A1B6LVG0   A0A0A9ZBH5   A0A0K8T359   A0A1B6K7I5   A0A1B6E423   A0A0L7R1X5   A0A195F1E7   A0A195BZ09   A0A195CUH2   A0A158NBW9   A0A139WE76   A0A195BEU7   A0A151XG26   A0A1B6DSZ0   E0VML7   A0A158P3L9   A0A151J259   A0A1J1HNF9   A0A437BXX4   A0A1B6M7V2   A0A1B6KUS5   A0A139WEJ5   A0A088A620   A0A139WEC1   N6TZI3   A0A3L8DTT2   A0A026X112   B0WA44   A0A1W4WI94   A0A195FL54  

PDB

3DMK     E-value=8.17976e-14,     Score=189

KEGG

105841898    no KO assigned | (RefSeq) nephrin-like

GO

GO:0016021   GO:0005515   GO:0003676   GO:0005840   GO:0006412   GO:0015934   GO:0015914   GO:0046872   GO:0016876   GO:0043039  

Length:

659

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.78934

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00570

outside

1  -  516

TMhelix

517  -  539

inside

540  -  659

 

 

Pi

27.479245

Theta

24.595641

Tajima's D

0.065923

CLR

1.727271

CSRT

0.384930753462327

Interpretation

Uncertain