Gene

KWMTBOMO08072

Annotation

PREDICTED:_hemicentin-1-like_[Bombyx_mori]

Location

Bomo_Chr13(+):14447920-14470977      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.8 Extracellular   Reliability : 1.384

CDS

ATGGACACACCGTCCTATGTAGCAACCGACTCTGGTGCTGCTGAGCTCACGTTTTACTATGACACTCGAGTGCTCGGGCCGTCTGCTCACTGGACTGACGAGCCCTTCGCAAACCGAGCACGCTGGTACAGCACGCCGTCTTCTGGTCTCCACGTGGATGCTGTACAGGCCCGAGACAGAGCCGTCTACAGATGCAGGGTCGATTTCCAAATCTCACCCACCAGGAACTACAGGATTGCACTTGATGTAATAGAGCTCCCGAATAAGCCGGTTATCTTTGACGAATTCGGCAAGGAAATATCCGGTGCGGCGGGCCCTTACAACGAGGGTGGGGACTTCAAACTTATTTGTTCAGTAAACGGGGGTACACCCACTCCAAGAGTACAATGGCTGCACGGAGACACAGTTTTAACGACTTTGGGAGCCAGTGACCTTCAACCTTCGGGGATGACCAGGACTCTAGTACTAGTTGTGAAGAACGCTACTAGGCTGCATTTGTCTGCTGTTTACACTTGCACGGCTGATAACACACTGTTGTCTACACCGCAGAAGACTAGCGTTCGAGTGGATCTGTATTTGAGGCCGCTATCAGTCGAAATTTTATCAAAGGAACAGCCGCTCTCCGTGGGCAGAAAGACTGAGCTTTGGTGCCGGTCTACAGGGGCACGACCCCCTGCTAATATCACTTGGTGGCTTGATGGAAAACAGCTGCACTCTATCGGCAAACAGAAAAAGGATACAAACGAAAGCCAGTCTTTGCTCGAATGGGTCCCCATGAAAGAGCACAACGGGAAGGTACTCACATGCAGAGCTGAACATGTTCGCTTCAATCACTCCACCATTGAAAGCAAGCTACCTTTGAATATTTACTACGTTCCCATTACAAGAATGGAGCTTGGCTCGAAGATGAATCCAAACGATATTGAAGAAGGCGACGATGTTTACTTCGGGTGCGACGTTGACGCAAATCCACCAGCGTACAAAGTCATATGGGAGCATAACGAGGTTCTTCTACAACACAATCCATCGAATGGTGTAATATTGACCGGGAACACGAACCTGGCGGTCCGAAACGTATCAAGACACCAAGCGGGAAACTACACTTGCACAGCATCTAACGTGGAGGGTGACGGAAAATCTCCTCCACTGCACTTACAAATAGTTTGTGAGTATACTTTAATAATGATTATTGCAGTACGTCAAGTAATAGAAATTCAATCAGTGGCACATCAAGATTTACATCCATATTAA

Protein

MDTPSYVATDSGAAELTFYYDTRVLGPSAHWTDEPFANRARWYSTPSSGLHVDAVQARDRAVYRCRVDFQISPTRNYRIALDVIELPNKPVIFDEFGKEISGAAGPYNEGGDFKLICSVNGGTPTPRVQWLHGDTVLTTLGASDLQPSGMTRTLVLVVKNATRLHLSAVYTCTADNTLLSTPQKTSVRVDLYLRPLSVEILSKEQPLSVGRKTELWCRSTGARPPANITWWLDGKQLHSIGKQKKDTNESQSLLEWVPMKEHNGKVLTCRAEHVRFNHSTIESKLPLNIYYVPITRMELGSKMNPNDIEEGDDVYFGCDVDANPPAYKVIWEHNEVLLQHNPSNGVILTGNTNLAVRNVSRHQAGNYTCTASNVEGDGKSPPLHLQIVCEYTLIMIIAVRQVIEIQSVAHQDLHPY

Uniprot

A0A212FKE7   A0A194Q659   A0A194RDG7   A0A2W1BFG7   A0A3S2P4N9   A0A437BPB1   + More
A0A194QC59   A0A194RCY1   A0A0L7L3B9   A0A2H1WP36   K7J3W1   A0A1Y1NAB6   A0A0L7KWU5   A0A026WZS6   A0A154PQL6   A0A232FD16   A0A3L8D540   A0A195F9V8   A0A0M9ABL7   A0A195EAN5   A0A158NCS0   A0A151HZS0   A0A0C9PXU9   A0A0C9QIG5   A0A1B6DTE2   A0A0C9R081   A0A146LYE1   A0A0A9XSS5   A0A2S2NL76   A0A2H8TFI4   Q17LV3   C8VV84   A0A088AEQ8   A0A1S3D0I8   D6WPK0   A0A0L7RI46   J9K2X1   A0A1I8Q7E3   E1JII4   A0A2A3EAV1   A4IJ60   A0A0A9ZA85   A0A336LM08   A0A1S4GDS9   E0VMK9   A0A084VRP7   Q0KI85   B4HIF4   B4PLG0   B3NZK0   B4GLE2   A0A0M5IZH3   A0A182XU94   A0A1W4UT22   A0A182II24   A0A3B0KEL4   B4KAI7   W8AZH0   A0A0Q9X4G1   A0A0Q9WPR8   A0A2S2QDI2   H9J5G2   B3LZ81   A0A2A4JDY9   Q7PUJ2   A0A026WSM2   A0A3L8D7Y1   A0A158NT60   A0A154P3M9   A0A151IA00   A0A2J7PYK2   A0A212FI98   A0A182UG36   A0A194RK28   A0A437BXX4   A0A194PPB3   A0A2H1WJ89   A0A151WJA9   A0A195EGJ5   A0A2J7PYN3   A0A0P9ANK1   A0A0K8T359   A0A0A9ZBH5   C0PTV4   B0WA44   A0A067RCL4   A0A1B6G259   A0A2A3E5P9   A0A182N5E5   E0VML7   A0A182R5H8   A0A088A033   A0A212EM07   A0A1J1HQ06   A0A2R7WZ49   B3LX91   A0A1Y1NKS5   A0A1W4UR97  

Pubmed

22118469    26354079    28756777    26227816    20075255    28004739    + More
24508170    28648823    30249741    21347285    26823975    25401762    17510324    18362917    19820115    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12364791    20566863    24438588    17994087    17550304    24495485    19121390    24845553    18057021   

EMBL

AGBW02008062    OWR54211.1    KQ459439    KPJ01023.1    KQ460397    KPJ15325.1    + More
KZ150099    PZC73538.1    RSAL01000023    RVE52251.1    RVE52253.1    KPJ01021.1    KPJ15324.1    JTDY01003187    KOB69998.1    ODYU01009627    SOQ54194.1    AAZX01000985    AAZX01008934    GEZM01008094    JAV94862.1    JTDY01004822    KOB67707.1    KK107061    EZA61348.1    KQ435007    KZC13410.1    NNAY01000395    OXU28681.1    QOIP01000014    RLU14968.1    KQ981727    KYN37161.1    KQ435710    KOX79819.1    KQ979236    KYN22176.1    ADTU01011685    ADTU01011686    ADTU01011687    ADTU01011688    ADTU01011689    ADTU01011690    ADTU01011691    ADTU01011692    ADTU01011693    ADTU01011694    KQ976642    KYM78678.1    GBYB01006328    JAG76095.1    GBYB01000377    JAG70144.1    GEDC01008360    GEDC01006854    JAS28938.1    JAS30444.1    GBYB01000378    GBYB01001375    JAG70145.1    JAG71142.1    GDHC01005991    JAQ12638.1    GBHO01019822    JAG23782.1    GGMR01005320    MBY17939.1    GFXV01000223    MBW12028.1    CH477211    EAT47681.1    BT099830    ACV91668.1    KQ971354    EFA06209.2    KQ414588    KOC70468.1    ABLF02039633    ABLF02039634    ABLF02039636    ABLF02039639    ABLF02039640    ABLF02039642    ABLF02039645    ABLF02039646    ABLF02039647    ABLF02039648    AE014297    ACZ94883.1    KZ288301    PBC28857.1    BT030418    ABO52838.1    GBHO01004899    GBRD01005769    GDHC01012855    JAG38705.1    JAG60052.1    JAQ05774.1    UFQS01000043    UFQT01000043    SSW98369.1    SSX18755.1    AAAB01008987    DS235315    EEB14615.1    ATLV01015761    ATLV01015762    KE525036    KFB40641.1    ABI31162.1    CH480815    EDW42669.1    CM000160    EDW96867.2    CH954181    EDV49573.1    CH479185    EDW38366.1    CP012526    ALC45674.1    APCN01002092    APCN01002093    OUUW01000007    SPP83491.1    CH933806    EDW15700.2    GAMC01016297    GAMC01016296    GAMC01016295    JAB90258.1    CH964272    KRF99985.1    CH940650    KRF83023.1    GGMS01006538    MBY75741.1    BABH01028139    CH902617    EDV43008.2    NWSH01001734    PCG70297.1    EAA01423.6    KK107111    EZA59032.1    QOIP01000011    RLU16384.1    ADTU01025502    ADTU01025503    ADTU01025504    ADTU01025505    ADTU01025506    ADTU01025507    ADTU01025508    ADTU01025509    ADTU01025510    ADTU01025511    KQ434809    KZC06457.1    KQ978252    KYM95902.1    NEVH01020344    PNF21423.1    AGBW02008416    OWR53449.1    KQ460118    KPJ17690.1    RSAL01000001    RVE55298.1    KQ459596    KPI95281.1    ODYU01008707    SOQ52514.1    KQ983039    KYQ47942.1    KQ978957    KYN27022.1    PNF21422.1    KPU79298.1    GBRD01006221    JAG59600.1    GBHO01002348    GDHC01008300    JAG41256.1    JAQ10329.1    BT071799    ACN43735.2    DS231868    EDS40777.1    KK852551    KDR21492.1    GECZ01013250    JAS56519.1    KZ288379    PBC26576.1    EEB14623.1    AGBW02013965    OWR42507.1    CVRI01000006    CRK88297.1    KK856079    PTY24802.1    EDV41691.1    KPU79296.1    KPU79297.1    KPU79299.1    GEZM01002471    JAV97235.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000283053    UP000037510    UP000002358    + More
UP000053097    UP000076502    UP000215335    UP000279307    UP000078541    UP000053105    UP000078492    UP000005205    UP000078540    UP000008820    UP000005203    UP000079169    UP000007266    UP000053825    UP000007819    UP000095300    UP000000803    UP000242457    UP000009046    UP000030765    UP000001292    UP000002282    UP000008711    UP000008744    UP000092553    UP000076407    UP000192221    UP000075840    UP000268350    UP000009192    UP000007798    UP000008792    UP000005204    UP000007801    UP000218220    UP000007062    UP000078542    UP000235965    UP000075902    UP000075809    UP000002320    UP000027135    UP000075884    UP000075900    UP000183832   

PRIDE

Q0KI85    H9J5G2    C0PTV4   

Pfam

PF08205   C2-set_2        + More
PF13895   Ig_2
PF00041   fn3
PF07686   V-set
PF00047   ig
PF07679   I-set

Interpro

IPR013783   Ig-like_fold        + More
IPR013162   CD80_C2-set       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR036116   FN3_sf       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR003961   FN3_dom       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
IPR013098   Ig_I-set       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A212FKE7   A0A194Q659   A0A194RDG7   A0A2W1BFG7   A0A3S2P4N9   A0A437BPB1   + More
A0A194QC59   A0A194RCY1   A0A0L7L3B9   A0A2H1WP36   K7J3W1   A0A1Y1NAB6   A0A0L7KWU5   A0A026WZS6   A0A154PQL6   A0A232FD16   A0A3L8D540   A0A195F9V8   A0A0M9ABL7   A0A195EAN5   A0A158NCS0   A0A151HZS0   A0A0C9PXU9   A0A0C9QIG5   A0A1B6DTE2   A0A0C9R081   A0A146LYE1   A0A0A9XSS5   A0A2S2NL76   A0A2H8TFI4   Q17LV3   C8VV84   A0A088AEQ8   A0A1S3D0I8   D6WPK0   A0A0L7RI46   J9K2X1   A0A1I8Q7E3   E1JII4   A0A2A3EAV1   A4IJ60   A0A0A9ZA85   A0A336LM08   A0A1S4GDS9   E0VMK9   A0A084VRP7   Q0KI85   B4HIF4   B4PLG0   B3NZK0   B4GLE2   A0A0M5IZH3   A0A182XU94   A0A1W4UT22   A0A182II24   A0A3B0KEL4   B4KAI7   W8AZH0   A0A0Q9X4G1   A0A0Q9WPR8   A0A2S2QDI2   H9J5G2   B3LZ81   A0A2A4JDY9   Q7PUJ2   A0A026WSM2   A0A3L8D7Y1   A0A158NT60   A0A154P3M9   A0A151IA00   A0A2J7PYK2   A0A212FI98   A0A182UG36   A0A194RK28   A0A437BXX4   A0A194PPB3   A0A2H1WJ89   A0A151WJA9   A0A195EGJ5   A0A2J7PYN3   A0A0P9ANK1   A0A0K8T359   A0A0A9ZBH5   C0PTV4   B0WA44   A0A067RCL4   A0A1B6G259   A0A2A3E5P9   A0A182N5E5   E0VML7   A0A182R5H8   A0A088A033   A0A212EM07   A0A1J1HQ06   A0A2R7WZ49   B3LX91   A0A1Y1NKS5   A0A1W4UR97  

PDB

3DMK     E-value=1.45741e-10,     Score=159

KEGG

101738258    no KO assigned | (RefSeq) hemicentin-1-like

GO

GO:0016021   GO:0005515   GO:0003676   GO:0005840   GO:0006412   GO:0015934   GO:0015914   GO:0046872   GO:0016876   GO:0043039  

Length:

416

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02743

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.00976

outside

1  -  416

 

 

Pi

25.047317

Theta

19.792212

Tajima's D

0.759785

CLR

0.790309

CSRT

0.6015199240038

Interpretation

Uncertain