Gene
KWMTBOMO08062
Pre Gene Modal
BGIBMGA001117
Annotation
PREDICTED:_protein_SPT2_homolog_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 4.51
Sequence
CDS
ATGGACTTTCGCGAGACGCTTTTAGCTGCTCAGCGAAATCAACAACAAAAGTCATCCGATCATTTTTACTACAAGGCTCGTTTAGATCCTTTAAAAAAGGAACAGAGACAAAAAGAGAAACTTTCGGCTAACATACAGAAGTTTTTGGCGAAAAAAGATGAAGAAGAATATCAAAAGAAAATTGAGGCTCAGAAGAAAAAAGAAGAGCTTCTGGCCATGCGGGATCCTAAAGCGCTCCGCAAGATCCAGAAAACCTTAAAAGTCATCAAGTCTGCTAATAAATCAGTTATTGAGGATGTGGATAGAGAGAACACAGCTGTAACTCTCACTGGCCCTGAACAACCTGATCAAGATGACTATGGCTATGAGTCTCAGGCGGCTGCTGCCATTTATGCTAAGATGATGGAAAAGTACAGTAAGATACCTGAGGAACCAAAGTTTCCAAGTAGTTTGAAATCTGTGAAAAAAGATTTGAATGGTACAAGAGAAAGGGTCAAAAATGCTCTTCAGCATGAAGATGAACCAGTTCCTCATAAAAGGAGAAGGCGTACTGAAAATGGAGAAAGAGAACCAAGTCCTCCTTCGAAACATGAAGTCGAAAAAAAGAAAGATGAGAAACCTAAAATAAGAAAACCTGCACCACCTCCTTTGGACTTTAACCAGCTGTTGAAAATTGCGGAACAAAAAAAGAGTGAACCTATTGAAATTAGTACTAAGAAACCTGTCCAAGAAGCTGAACCAGAGAGGCCAATGACCAAAAAACAAAAGAAAGAATATGAGGATGAGATGGCTCGAAGGCAACGTCGTTTAGAAAGATTAGAGGCTGAGAAACATGGTGGAAAGAAAGTTCAAAAAGAAGAAAAAGTAACTCATAAAGATGAAAAACCATCAGAGAGGGAGCGCAAGCCTGAGACTAGTGGAGGATTAGGTCGCATACCAAAAATCGGTGATAGAAATTCTAACAAAAACATAAACTCCAAACCAGTAGAAAGAGAAAAAAATGAAAGAACCATAAAAGATAAAGAGAAGCCTAAAGTAGACAAAGAAAAATCTGAACGGGAGAAGGAGAAATTGGAGAGAGAAAGATTAGAAAGGTTGAAAGCCGAAAGAGAAAGAATTGAAAGAGACATTGAAAGGCTTAATAAAGACAGAGAGAGATTAGAAAAGGCAAAGTCTAAGCTCGAAACTAAGCCAACAGAAAAAACAAAACCAATAGATAAAACTGCAGATAAAACTAAATTAAGCGAAAATGTAAAGAAAAATATTGATTTGAAAAGTCAGAATACATACAGGATAGATAAAAATTCCAATGAAAAGAAACCGAGTGCACTGAGCAGAAGTGGAGATGGTAAATACATGAATGGTCATGTTCAGGGTAAATCGGTGCCGAAACCTAAAGAACAAACTGTCCAAAAGAATGGTATAAATGGCAAAGTTCCATTAACTAAAAGTAAAGTTGGGGATAGTCGATCAGAAAATGGTAAACGTTTACCTGAAAAAGATTCAAAAAGGCCAGATGACAAGAGGTTGCAACCGAGTAGTACAAAAGTTCAAAATGGGCCGAGTAAGCCGAAAATCTCTAATAGTTTTGACTTCGACAAACATGTGAATTCATTAGGGAAGAATGGCGCTAGGAGACCGGACGGTACTCGGCAGTATCCACCGGGTGACGTTAGGAGAAAACCTCAGGGAAAACCTAAACGTCGTACTCTAGATTCGGATTCGGAATACGATTCAGAACTTGACGACTTCATTGACGATGGAGACGAACAAATGGACTATTCTAAACACATCAAGGAGATTTTCGGCTACGATAAGTCCAAGTACCGAGATATGGATGACGACGATGATCCGATGATGGAGTCTAGTTTCGCACGACAACAACGCGAGGAGTACATCAGCAAAAAAATTGGAATAATGGAAGACTTAGAAGACATGAGATTGGAGGCGATGCAGAAAAAGAAAAAGAAACGGCGTATTAGTGACGATTGA
Protein
MDFRETLLAAQRNQQQKSSDHFYYKARLDPLKKEQRQKEKLSANIQKFLAKKDEEEYQKKIEAQKKKEELLAMRDPKALRKIQKTLKVIKSANKSVIEDVDRENTAVTLTGPEQPDQDDYGYESQAAAAIYAKMMEKYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKRRRRTENGEREPSPPSKHEVEKKKDEKPKIRKPAPPPLDFNQLLKIAEQKKSEPIEISTKKPVQEAEPERPMTKKQKKEYEDEMARRQRRLERLEAEKHGGKKVQKEEKVTHKDEKPSERERKPETSGGLGRIPKIGDRNSNKNINSKPVEREKNERTIKDKEKPKVDKEKSEREKEKLERERLERLKAERERIERDIERLNKDRERLEKAKSKLETKPTEKTKPIDKTADKTKLSENVKKNIDLKSQNTYRIDKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGINGKVPLTKSKVGDSRSENGKRLPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSFDFDKHVNSLGKNGARRPDGTRQYPPGDVRRKPQGKPKRRTLDSDSEYDSELDDFIDDGDEQMDYSKHIKEIFGYDKSKYRDMDDDDDPMMESSFARQQREEYISKKIGIMEDLEDMRLEAMQKKKKKRRISDD
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF08243 SPT2
Interpro
IPR013256
Chromatin_SPT2
ProteinModelPortal
PDB
5BS7
E-value=0.000632739,
Score=104
Ontologies
GO
Topology
Length:
663
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00026
outside
1 - 663
Population Genetic Test Statistics
Pi
3.843186
Theta
6.005047
Tajima's D
0.683797
CLR
0.675967
CSRT
0.590670466476676
Interpretation
Uncertain
