SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08048  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001123
Annotation
PREDICTED:_exportin-5_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.005 PlasmaMembrane   Reliability : 1.383
 

Sequence

CDS
ATGAATGTAGGAGGATTGGGACCAGAGATTTCTGGGGAAGTAGCTTTAATAGCTGATGAGCTAAGTCGAGCTGTGGAATTGACCTTGAACCCAACTGTTTCACAAGATGCTCGGAATCAGGCATACAATGCTTGTGAGAGTTTCAAGGAGAATTCACCATGGTGTGCTCAAGCTGGTCTTTTGTTGGCCAGTGGCAATCAGTATTCTCCTGTTGTCAAACACTGTGGTCTTCAGTTGATGGAGCACACTGTCAAGTACAGATGGACACGTATAACACAGGCAGAGAAGCTTTTCATCAAAGAGAATGCAATGAAACTTCTCTACATGGGTGGCTGGGAGATGGGCCATTTGAATGATGCACTGGCTCGAGTAATTGTTGAGATGATAAAACGTGAGTGGCCACAGCAATGGCCAACTCTTTTAGGCGAGCTCAGTGATGCTTGTACTAGAGGCCATCAACACACACAGATTGTGTTGCATGTTTTTCTGAGACTGGTCGAAGATGTAGCTACTTTACAGACACTGGAACAGAACCAACGTCGTAAGGATATATACCAAGCTCTAACGAGTAACATGGCGGAGATATTCTCGTTCTTTATGCGCCTCATCGAGCTTCATGTACAAGAATTCAGAGAGAAAACTGCGACCGGCGATTATAGCGGTGCGGCCAGCAATGGACGTGTTGTACAGGTAGTCTTATTAACGTTGACCGGATTTGTGGAGTGGGTGTCCACAAATCACGTTGTCATGAACAACGGAAGGCTCCTGCAGATCCTCTGCATCCTGCTCCAAGACGACGTATTCCAGCTGCCCGCGGCTGAGTGCCTGCTACAGATCGTTAATAGGAAAGGATCAACCAAGGAGCGGAAACCTCTGATGATCTTGTTCAGTGAAGACGCGATTTCGTGTATTCACCGAGCAGCGATAGCGGCGATTAACGTGGTCGACGAAAATCATTATTTGTTTCTAAAAAAATTAGCTCAGGTGGTGGTGGGCGTGGCGCAGCAGCTGACGTCGCTGTGGAGCAACGCGCAGAACGTGGAGTCGTGGCTGCCGCTGCTGGTGGAGACGAGCCTGGCGCTGGTGTCGCACCCCTCGCTCACGCTGTCGCAGAGCGCCACCGCGCTGTGGCTGGCGCTGCTCAAGCACGAGCACGCCGCCAAGCACCTGCTGCCCGCCGTGCCGCGCTGGCTGCACGCCGCCGCGCCCAAACTGCTCAAGACGTACAGTCCGCGCGCGAGCTCCGAGGAATTTTAA
Protein
MNVGGLGPEISGEVALIADELSRAVELTLNPTVSQDARNQAYNACESFKENSPWCAQAGLLLASGNQYSPVVKHCGLQLMEHTVKYRWTRITQAEKLFIKENAMKLLYMGGWEMGHLNDALARVIVEMIKREWPQQWPTLLGELSDACTRGHQHTQIVLHVFLRLVEDVATLQTLEQNQRRKDIYQALTSNMAEIFSFFMRLIELHVQEFREKTATGDYSGAASNGRVVQVVLLTLTGFVEWVSTNHVVMNNGRLLQILCILLQDDVFQLPAAECLLQIVNRKGSTKERKPLMILFSEDAISCIHRAAIAAINVVDENHYLFLKKLAQVVVGVAQQLTSLWSNAQNVESWLPLLVETSLALVSHPSLTLSQSATALWLALLKHEHAAKHLLPAVPRWLHAAAPKLLKTYSPRASSEEF

Summary

EMBL
BABH01000411    BABH01000412    BABH01000413    BABH01000414    BABH01000415    BABH01000416    + More
BABH01000417    BABH01000418    BABH01000419    ODYU01000175    SOQ34516.1    KQ459439    KPJ01001.1    KQ460397    KPJ15304.1    AGBW02011847    OWR46027.1    GECZ01016038    JAS53731.1    KQ414664    KOC65194.1    GEBQ01029893    JAT10084.1    GEZM01042911    GEZM01042910    JAV79481.1    UFQT01000174    SSX21113.1    GL445305    EFN89855.1    GL887707    EGI70297.1    LBMM01001958    KMQ95474.1    KQ976731    KYM76198.1    GFDL01014660    JAV20385.1    ADTU01007003    GL442815    EFN62948.1    GFDL01014691    JAV20354.1    KQ981523    KYN40350.1    GFDL01014690    JAV20355.1    DS232092    EDS34630.1    GFDL01014665    JAV20380.1    KK107054    EZA61584.1    KQ982580    KYQ54462.1    KQ976755    KYN08593.1    JXUM01039442    JXUM01039443    JXUM01039444    KQ561204    KXJ79361.1    JXUM01051680    JXUM01051681    KQ561700    KXJ77769.1    KQ979657    KYN19903.1    KZ288296    PBC28934.1    GBYB01001603    JAG71370.1    GANO01000360    JAB59511.1    KQ971338    EFA02755.2    KB631581    ERL84473.1    APGK01014224    KB739238    ENN82327.1    KQ759878    OAD62258.1    KQ435012    KZC13806.1    GL766116    EFZ15568.1    CH477579    EAT38741.1    GAMC01017984    GAMC01017981    GAMC01017979    GAMC01017975    GAMC01017971    JAB88580.1    AJVK01003920    JRES01000455    KNC31045.1    NNAY01001104    OXU25116.1    GBXI01014978    JAC99313.1    ATLV01023941    KE525347    KFB50083.1    AJWK01029736    AJWK01029737    GAKP01010404    GAKP01010403    GAKP01010402    JAC48549.1    NEVH01018372    PNF23709.1    AAAB01008986    EAA00125.3    GFDF01002957    JAV11127.1    PNF23710.1    APGK01024644    APGK01024645    KB740557    ENN80370.1    GGFK01006684    MBW40005.1    GFDF01002953    JAV11131.1    APCN01002416    GGFL01002841    MBW67019.1    CH479242    EDW37642.1    AXCM01009764    GDHF01027080    GDHF01019839    GDHF01012830    JAI25234.1    JAI32475.1    JAI39484.1    KQ435918    KOX68731.1    CAQQ02177224    ADMH02000120    ETN67749.1    AXCN02001090    KK854082    PTY10898.1    GBHO01025012    JAG18592.1    JXJN01021970    JXJN01011306    CVRI01000055    CRL01396.1    GDHC01017951    JAQ00678.1    ACPB03001853    CCAG010005910    OUUW01000003    SPP78835.1    CH379063    EAL32562.1    CH933814    EDW05564.1    KRG07451.1    KRG07452.1    CH940655    EDW66311.1    KRF82632.1    CH916370    EDV99983.1    CH963851    EDW75143.1   
Pfam
PF08389   Xpo1        + More
PF03810   IBN_N
Interpro
IPR001494   Importin-beta_N        + More
IPR013598   Exportin-1/Importin-b-like       
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR040018   XPO5       
SUPFAM
SSF48371   SSF48371       
Gene 3D
PDB
5YU7     E-value=5.72167e-64,     Score=620

Ontologies

Topology

Subcellular location
Nucleus  
Length:
418
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0874700000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00147
outside
1  -  418
 
 

Population Genetic Test Statistics

Pi
15.867493
Theta
17.869463
Tajima's D
0.005642
CLR
1.671211
CSRT
0.373031348432578
Interpretation
Uncertain
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