SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08042
Pre Gene Modal
BGIBMGA001125
Annotation
PREDICTED:_uncharacterized_protein_LOC106131382_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.047
 

Sequence

CDS
ATGGAGCAACAAGATGGATGGAATGGCCGAGATACGAATTCCGCTGAAAACTCTACCGAAAATTCTCATGCCACTGAAAGGGATCGGGTGCGCATCGAATTCTACGCCACTTATGACGTCATGACCGGTGTTCGAATAGCCGCAACACTAGGCGGCTTTTTCGCTTTAATGGTGTTTTTGATTGTCTATAAAAGCCGGAGTAAATCAGTTAAAGCTTTGAACGACCCGAAGATAGTGGAGATGGCAGAAGCCGTCGTTGCTGAAGAACAGGCAGTTGAAGAAGAGCGACAGTTGACGGCTGCTCTAGAGGCAGCGTTGTCGGAACGAGCTCGCCGAACCTCGCGACCTTCAATCGGCGAGGAGCCACCTTGGCCGCGAACTGCTCGTTTTTCCTCTTACGGTGGAGGATATGGTAGTTTATTAACGCCGCCACGTCGACTGTCGAATCTCCGAGGTGATTCGCTTCCTGGTTCAGCTTTGCGATTCGTGGATCGGCGGCCCTCGGCTGGGCCACGAGACCGGCGTCTCAGTTCAGCCACATGTTCAAGTTCTGGAAGTTCTTATTTAGAGCGTCGTGGCTCTTCTGTAGTTTGTGCTTTACAAGAACGTCGTCTTTCACCGTGCCCAAGTGAACGGCTTGCGCCTCTGGCGTCTGTAGGGAGCGTGGGACCATCGTATGCTGTGGAGTGTGAAATAGCGTCAGTAGGCGCGGACTCTGTGTTTGCTGAAGACGAACCGGACTCGACTGATGGTGAAGTTGAGCAGTTTTCGACCGACAGCGGTGGCGGCGAGGCGGCTGCGGTTGGCGAATGTACAGAACTCGCCAGCCGACCTGTGCACGTACCGCTCCGGTTGGATCGAGCTTCCCACTCACGGGAAACGTTGTTCTAG
Protein
MEQQDGWNGRDTNSAENSTENSHATERDRVRIEFYATYDVMTGVRIAATLGGFFALMVFLIVYKSRSKSVKALNDPKIVEMAEAVVAEEQAVEEERQLTAALEAALSERARRTSRPSIGEEPPWPRTARFSSYGGGYGSLLTPPRRLSNLRGDSLPGSALRFVDRRPSAGPRDRRLSSATCSSSGSSYLERRGSSVVCALQERRLSPCPSERLAPLASVGSVGPSYAVECEIASVGADSVFAEDEPDSTDGEVEQFSTDSGGGEAAAVGECTELASRPVHVPLRLDRASHSRETLF

Summary

Ontologies

Topology

Length:
296
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.86781
Exp number, first 60 AAs:
19.05509
Total prob of N-in:
0.39316
POSSIBLE N-term signal
sequence
outside
1  -  40
TMhelix
41  -  63
inside
64  -  296
 
 

Population Genetic Test Statistics

Pi
2.07924
Theta
19.557914
Tajima's D
-1.917644
CLR
18.109756
CSRT
0.0178491075446228
Interpretation
Uncertain
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