Gene

KWMTBOMO08038

Pre Gene Modal

BGIBMGA001033

Annotation

PREDICTED:_CD151_antigen-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(+):13520575-13525228      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 4.08

CDS

ATGGGAGCCGGTGTACTAGGCGTCGGCGTGTGGAACGTCACATACCGGCATCATTACGTGTCGTTGCTGCCGACGATCACGTATCCGGCAATTGGATATTTGCTGGTCATAGCGGGGTCATTCGGCCTGCCGTTTGCAGCGCTCGGTTGCTGCGGGCTGAAGACCGAGAACCGAACGAGCCTGCTCTGTTACACATATTTCCTGCTGATTACGTTCATACTAGAAGCCGGTGCTGGCGGCCTAGCGTACTATTACGAAGAGGCTATAGAAGAAGAACTTCGCGCCGGCTTGAATAGCACGTTCACTACGAACTACGCGCTCGATACAGCTGTCACTGACGCTGTTGACAGTATGCAGACCGAGTTCAAATGCTGCGGCGCAATACGATACGAAGACTGGAGGAAGAGTCGGTGGCACGAGCACGACCCGCGGCTGCTGGTGCCGGACTCGTGCTGCAAGACCCGCACCCAGCGCTGCGGGACCAGGGATCATCCCTCCAATATTTATTATACGGGCTGCATTCACCACTTCACGAATCACATACGAGACCAGCTAATAATATTAGCGGCCGTCGGAGTCGGGATGTCGGTTATACCCATATTCGGGTTTTTGTTTTCGTGCGTTCTTTACGTGAAAATAAAGCACGTGATCGACTGA

Protein

MGAGVLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLCYTYFLLITFILEAGAGGLAYYYEEAIEEELRAGLNSTFTTNYALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRCGTRDHPSNIYYTGCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKIKHVID

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

H9IUV3   A0A2H1UZR8   A0A3S2L1X0   A0A212FCL4   A0A194QC29   A0A194RBS4   + More
A0A023EXX0   A0A151IGV1   A0A1B0D562   A0A026W3J5   A0A3L8DV77   A0A067RIN8   U5ET06   A0A1L8DKC2   V9IHU0   A0A088AV46   A0A0N0BE20   A0A232EP46   K7IS64   A0A084VJU9   A0A0C9QJP0   A0A069DQP1   A0A182FLG1   E0VXQ9   A0A224XWD5   A0A1S4HDW1   A0A1S4HDP2   A0A182KDX5   A0A182PW04   A0A0P4VRG4   A0A2M4CZZ5   A0A2M4CZV3   A0A2M4CZR9   A0A0V0G7W5   A0A1Q3FX79   A0A182NDQ5   A0A2A3ERA7   A0A146LI68   A0A182IS82   A0A1Q3FXI8   A0A3R7MHN7   A0A2M4AMT4   A0A0A9XXW9   A0A0K8SCE0   B1WAT5   D2A0N4   A0A1S3K3N3   A0A1B6E5Y5   A0A1L8GCX7   A0A182R937   Q6DDI3   A0A023EKA5   Q17AX9   R7UE15   A0A1B6FKH4   A0A1B6JEN1   A0A023FQL5   A0A1E1XDW4   A0A1Z5LBI4   A0A0K8RPX5   A0A2R5L6M0   B7P2E1   K1R7F9   A0A131XFX8   A0A3S2N5Y2   T1JK25   H2MJA3   A0A3P9HWA5   A0A3B3D856   L7LZG5   A0A3P9MAV3   A0A147A2Y1   A0A2U9B2D4   A0A3Q3M2N3   A0A2U9B2E0   A0A3B5KLI5   A0A3P8VKJ2   A0A0B8RZC5   A0A131YZ66   A0A2J7R2N5   A0A224Z5H7   A0A224Z0M7   A0A1S3KT87   A0A3B4ZYP6   I3K087   A0A1W5B0K8   A0A3B3BHQ0   A0A3Q4AFS0   A0A3Q4GFS2   H3D0C2   A0A3B5MBA1   G1KR65   A0A2I4AVV3   M3ZCS7   A0A3Q1BYR1   A0A3B4ES38   A0A3Q3C916   A0A3P8QYQ7   A0A3P9BDB6   H2MJA5  

Pubmed

19121390    22118469    26354079    25474469    24508170    30249741    + More
24845553    28648823    20075255    24438588    26334808    20566863    12364791    27129103    26823975    25401762    20431018    18362917    19820115    27762356    24945155    17510324    23254933    28503490    28528879    22992520    28049606    17554307    29451363    25576852    21551351    24487278    25476704    26830274    28797301    25186727    15496914    23542700   

EMBL

BABH01000428    ODYU01000029    SOQ34108.1    RSAL01000232    RVE43811.1    AGBW02009165    + More
OWR51486.1    KQ459439    KPJ00986.1    KQ460397    KPJ15288.1    GBBI01004846    JAC13866.1    KQ977661    KYN00664.1    AJVK01003327    KK107453    EZA50622.1    QOIP01000004    RLU24113.1    KK852448    KDR23711.1    GANO01002983    JAB56888.1    GFDF01007267    JAV06817.1    JR044672    AEY59899.1    KQ435850    KOX70941.1    NNAY01003018    OXU20108.1    ATLV01013894    ATLV01013895    KE524908    KFB38243.1    GBYB01003739    GBYB01003740    JAG73506.1    JAG73507.1    GBGD01002669    JAC86220.1    DS235833    EEB18165.1    GFTR01004097    JAW12329.1    AAAB01008957    GDKW01001592    JAI55003.1    GGFL01006633    MBW70811.1    GGFL01006637    MBW70815.1    GGFL01006635    MBW70813.1    GECL01002117    JAP04007.1    GFDL01002856    JAV32189.1    KZ288192    PBC34268.1    GDHC01020296    GDHC01012469    GDHC01003027    JAP98332.1    JAQ06160.1    JAQ15602.1    GFDL01002873    JAV32172.1    QCYY01001609    ROT76799.1    GGFK01008784    MBW42105.1    GBHO01017983    GBHO01017982    JAG25621.1    JAG25622.1    GBRD01014873    JAG50953.1    AAMC01052796    BC161493    AAI61493.1    KQ971338    EFA02537.1    GEDC01003970    JAS33328.1    CM004473    OCT81779.1    BC077579    CM004472    AAH77579.1    OCT83961.1    GAPW01004037    JAC09561.1    CH477328    EAT43435.1    AMQN01001731    KB305005    ELU01487.1    GECZ01032003    GECZ01022280    GECZ01019089    JAS37766.1    JAS47489.1    JAS50680.1    GECU01009980    JAS97726.1    GBBK01001499    JAC22983.1    GFAC01001830    JAT97358.1    GFJQ02002295    JAW04675.1    GADI01001149    JAA72659.1    GGLE01001012    MBY05138.1    ABJB010187057    ABJB010247859    ABJB010475410    ABJB010770956    ABJB010893862    ABJB010967812    ABJB011040176    DS622131    EEC00763.1    JH816125    EKC37090.1    GEFH01002528    JAP66053.1    CM012439    RVE74216.1    JH432130    GACK01008756    JAA56278.1    GCES01013390    JAR72933.1    CP026244    AWO98103.1    AWO98102.1    GBSH01000607    JAG68418.1    GEDV01004093    JAP84464.1    NEVH01007828    PNF35076.1    GFPF01012273    MAA23419.1    GFPF01012272    MAA23418.1    AERX01012679    AERX01012680   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240    UP000078542    + More
UP000092462    UP000053097    UP000279307    UP000027135    UP000005203    UP000053105    UP000215335    UP000002358    UP000030765    UP000069272    UP000009046    UP000075881    UP000075885    UP000075884    UP000242457    UP000075880    UP000283509    UP000008143    UP000007266    UP000085678    UP000186698    UP000075900    UP000008820    UP000014760    UP000001555    UP000005408    UP000001038    UP000265200    UP000261560    UP000265180    UP000246464    UP000261640    UP000005226    UP000265120    UP000235965    UP000087266    UP000261400    UP000005207    UP000192224    UP000261620    UP000261580    UP000007303    UP000261380    UP000001646    UP000192220    UP000002852    UP000257160    UP000261460    UP000264840    UP000265100    UP000265160   

PRIDE

H9IUV3   

Pfam

PF00335   Tetraspanin

Interpro

IPR000301   Tetraspanin        + More
IPR018499   Tetraspanin/Peripherin       
IPR008952   Tetraspanin_EC2_sf       
IPR018503   Tetraspanin_CS       

SUPFAM

SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

H9IUV3   A0A2H1UZR8   A0A3S2L1X0   A0A212FCL4   A0A194QC29   A0A194RBS4   + More
A0A023EXX0   A0A151IGV1   A0A1B0D562   A0A026W3J5   A0A3L8DV77   A0A067RIN8   U5ET06   A0A1L8DKC2   V9IHU0   A0A088AV46   A0A0N0BE20   A0A232EP46   K7IS64   A0A084VJU9   A0A0C9QJP0   A0A069DQP1   A0A182FLG1   E0VXQ9   A0A224XWD5   A0A1S4HDW1   A0A1S4HDP2   A0A182KDX5   A0A182PW04   A0A0P4VRG4   A0A2M4CZZ5   A0A2M4CZV3   A0A2M4CZR9   A0A0V0G7W5   A0A1Q3FX79   A0A182NDQ5   A0A2A3ERA7   A0A146LI68   A0A182IS82   A0A1Q3FXI8   A0A3R7MHN7   A0A2M4AMT4   A0A0A9XXW9   A0A0K8SCE0   B1WAT5   D2A0N4   A0A1S3K3N3   A0A1B6E5Y5   A0A1L8GCX7   A0A182R937   Q6DDI3   A0A023EKA5   Q17AX9   R7UE15   A0A1B6FKH4   A0A1B6JEN1   A0A023FQL5   A0A1E1XDW4   A0A1Z5LBI4   A0A0K8RPX5   A0A2R5L6M0   B7P2E1   K1R7F9   A0A131XFX8   A0A3S2N5Y2   T1JK25   H2MJA3   A0A3P9HWA5   A0A3B3D856   L7LZG5   A0A3P9MAV3   A0A147A2Y1   A0A2U9B2D4   A0A3Q3M2N3   A0A2U9B2E0   A0A3B5KLI5   A0A3P8VKJ2   A0A0B8RZC5   A0A131YZ66   A0A2J7R2N5   A0A224Z5H7   A0A224Z0M7   A0A1S3KT87   A0A3B4ZYP6   I3K087   A0A1W5B0K8   A0A3B3BHQ0   A0A3Q4AFS0   A0A3Q4GFS2   H3D0C2   A0A3B5MBA1   G1KR65   A0A2I4AVV3   M3ZCS7   A0A3Q1BYR1   A0A3B4ES38   A0A3Q3C916   A0A3P8QYQ7   A0A3P9BDB6   H2MJA5  

KEGG

101740682    K06537 CD151 antigen | (RefSeq) CD151 antigen-like

GO

GO:0016021   GO:0016477   GO:0005887   GO:0030335   GO:0005604   GO:0009986   GO:0045807   GO:0044319   GO:0042098   GO:0005178   GO:0005515   GO:0005975   GO:0016020   GO:0005524   GO:0006412   GO:0016876   GO:0043039  

Subcellular location

Membrane  

Length:

218

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

68.68713

Exp number, first 60 AAs:

23.66471

Total prob of N-in:

0.02629

POSSIBLE N-term signal

sequence

outside

1  -  25

TMhelix

26  -  48

inside

49  -  60

TMhelix

61  -  83

outside

84  -  185

TMhelix

186  -  208

inside

209  -  218

 

 

Pi

16.516821

Theta

16.36353

Tajima's D

-0.692521

CLR

0.204055

CSRT

0.194990250487476

Interpretation

Uncertain