Gene

KWMTBOMO08032

Pre Gene Modal

BGIBMGA001127

Annotation

PREDICTED:_post-GPI_attachment_to_proteins_factor_2-like_[Bombyx_mori]

Location

Bomo_Chr13(-):13200746-13204759      View in EpiBrowser

Full name

Post-GPI attachment to proteins factor 2-like      

Location in the cell

PlasmaMembrane   Reliability : 4.859

CDS

ATGGTAAATGACGCACAATTAAAATCGCCACCAAAATCGGATGTGCACGGAGCGATACGCACAGACAATGATGTAAATATTGATAGGGGTGTTAAAATATTGGAGTACAAGGGCATACTCTGGACATGTGGTTTGCGACAAATATGTTTAGCTGCATTATGGCTTCCGCTGGGTGCTTTAATATTTTGTTACGTGACAGCCTCTATGTTCCAGGCAGATGATATACACGAAACACATTGTAAAGTTTACAATGTGGTCCCGTCAATAAGTGCAATTACCGGTATTAGTCCACAAAGGTATATTTGGAGGATATGCATCGCGTTTCATTTAGGACCAAGATTGTTAATAGGATCCCTGTATTACAATTATCATAAGGAACGAAATAGTTTTATTGGGGATGAAAAGGTACGAGTGCAGGCAAATAAACTGGGAGAGGCTTGCTATTGGCTCAATTTGATAGAGTTATTAGCACTTACGGGCGTCACCTATGTATCTAACAGAGAAAACTATTTTGTGCATGAGAAAATTTTCATAGTTTTTATGATTGTTGCGTTATTGCACATGCTGTGTCGAGGAAGAGTGGGCGCCATCGGAGCTGACTCGGTGACCCCCGTGCGGACCAATAATATAGTCTGGACGCTATTTTACGTGGCTGTGGCGTCGACTGTAGGGCTAGTTGTGTTTTTCTTGAGACACCGCCTTTTGTGCCGACCTCTAGCTTTCACATGGTTCTCAGTCTGCGAATACATTCTGGCTACCACAAACATGGCTTTCCATGCGATTGTGGTGCGCGACCTGCCACTTCACCATCTCCAAGTTGTATATCCTGATCACAAACGAAACTAG

Protein

MVNDAQLKSPPKSDVHGAIRTDNDVNIDRGVKILEYKGILWTCGLRQICLAALWLPLGALIFCYVTASMFQADDIHETHCKVYNVVPSISAITGISPQRYIWRICIAFHLGPRLLIGSLYYNYHKERNSFIGDEKVRVQANKLGEACYWLNLIELLALTGVTYVSNRENYFVHEKIFIVFMIVALLHMLCRGRVGAIGADSVTPVRTNNIVWTLFYVAVASTVGLVVFFLRHRLLCRPLAFTWFSVCEYILATTNMAFHAIVVRDLPLHHLQVVYPDHKRN

Similarity

Belongs to the PGAP2 family.

Keywords

Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Post-GPI attachment to proteins factor 2-like

Uniprot

A0A2H1WMS1   A0A194Q6H7   A0A194RH70   A0A3S2LT06   A0A212FN71   A0A0L7LK26   + More
E2BE99   A0A3L8DZN3   E2AY65   A0A0J7L4M2   A0A232EYE4   A0A195FHX0   F4W6M0   A0A195BT91   A0A158P2C0   A0A151WZH1   K7J394   A0A310S624   A0A154P8B7   A0A1B6K390   A0A1B0D232   A0A088AT17   A0A1B6KWS3   V9II09   A0A195E453   A0A1B6D455   A0A1B0C963   A0A067QU53   A0A195D343   A0A1Y1LZG6   Q7QFI7   A0A182Q073   A0A182FJN5   A0A1S4G996   A0A182T1D5   A0A182UDC3   W5JJR9   A0A182VCX6   A0A182Y7T0   E0VDS0   A0A2S2PRS0   A0A2H8TF78   A0A139WMX4   J9K5G6   A0A1J1IAV6   B0XEF9   A0A182J1W4   A0A182W4J5   A0A2P8ZDR7   A0A0L7REW5   A0A2A3EGB2   A0A026WIA9   Q17L81   Q17MC8   A0A0A9XFM9   A0A182MZI3   A0A1A9VRZ8   W8C4G1   A0A1B0GBK3   A0A1A9ZII1   A0A1A9W6E0   A0A1B0BBG9   W8B6X4   A0A1A9XX05   A0A0L0C3K3   A0A0A1WXX5   A0A1W4V2H1   A0A0R3P0T4   B4R7C0   A0A0P5FP14   B4PWT2   B4GVF2   B3NUS9   B4I723   A0A1I8MJM9   Q9VWK6   B5DNA8   B4JKL7   A0A182GZN2   B3N151   A0A1W4X8N8   A0A1W4WZ93   A0A3B0K311   A0A0P6E2U7   A0A0C9PGL1   B4M1T1   A0A182GQU8   B4L8Q9   A0A1I8Q8Q1   B4NBY9   A0A0M3QYZ8   A0A182XE08   A0A034V9Y1   A0A224XIF8   A0A2R5LHF4   A0A0V0G8S7  

Pubmed

26354079    22118469    26227816    20798317    30249741    28648823    + More
21719571    21347285    20075255    24845553    28004739    12364791    20920257    23761445    25244985    20566863    18362917    19820115    29403074    24508170    17510324    25401762    26823975    24495485    26108605    25830018    15632085    17994087    17550304    25315136    10731132    12537572    12537569    26483478    25348373   

EMBL

ODYU01009740    SOQ54370.1    KQ459439    KPJ00979.1    KQ460397    KPJ15281.1    + More
RSAL01000232    RVE43817.1    AGBW02006772    OWR55192.1    JTDY01000816    KOB75775.1    GL447768    EFN85944.1    QOIP01000002    RLU25762.1    GL443762    EFN61661.1    LBMM01000757    KMQ97561.1    NNAY01001629    OXU23381.1    KQ981523    KYN40290.1    GL887707    EGI70355.1    KQ976408    KYM91156.1    ADTU01007083    KQ982639    KYQ53269.1    KQ768935    OAD53027.1    KQ434841    KZC08091.1    GECU01019653    GECU01019153    GECU01002063    JAS88053.1    JAS88553.1    JAT05644.1    AJVK01002639    AJVK01002640    GEBQ01024078    JAT15899.1    JR048487    AEY60680.1    KQ979657    KYN19965.1    GEDC01016826    JAS20472.1    AJWK01001948    KK853265    KDR09196.1    KQ976885    KYN07317.1    GEZM01044165    JAV78481.1    AAAB01008846    EAA06607.2    AXCN02001274    ADMH02001027    ETN64371.1    DS235083    EEB11526.1    GGMR01019448    MBY32067.1    GFXV01000929    MBW12734.1    KQ971312    KYB29368.1    ABLF02036875    ABLF02036878    CVRI01000044    CRK96866.1    DS232826    DS233497    EDS25956.1    EDS30266.1    PYGN01000086    PSN54652.1    KQ414609    KOC69281.1    KZ288254    PBC30750.1    KK107207    EZA55401.1    CH477217    EAT47494.1    CH477207    EAT47821.1    GBHO01025138    GDHC01012439    JAG18466.1    JAQ06190.1    GAMC01009621    JAB96934.1    CCAG010001810    JXJN01011439    GAMC01009620    JAB96935.1    JRES01000948    KNC26885.1    GBXI01010776    JAD03516.1    CH379064    KRT06833.1    CM000366    EDX18361.1    GDIQ01254189    GDIP01135043    LRGB01003146    JAJ97535.1    JAL68671.1    KZS04038.1    CM000162    EDX02816.2    CH479192    EDW26439.1    CH954180    EDV46676.1    CH480823    EDW56121.1    AE014298    BT031012    BT031025    EDY72915.1    CH916370    EDW00120.1    JXUM01099925    JXUM01099926    KQ564528    KXJ72134.1    CH902650    EDV30086.1    OUUW01000015    SPP88647.1    GDIQ01069423    JAN25314.1    GBYB01000006    GBYB01000008    JAG69773.1    JAG69775.1    CH940651    EDW65635.2    JXUM01081370    JXUM01081371    KQ563242    KXJ74223.1    CH933815    EDW08034.2    CH964239    EDW82348.1    CP012528    ALC48553.1    GAKP01020594    JAC38358.1    GFTR01004161    JAW12265.1    GGLE01004816    MBY08942.1    GECL01002004    JAP04120.1   

Proteomes

UP000053268    UP000053240    UP000283053    UP000007151    UP000037510    UP000008237    + More
UP000279307    UP000000311    UP000036403    UP000215335    UP000078541    UP000007755    UP000078540    UP000005205    UP000075809    UP000002358    UP000076502    UP000092462    UP000005203    UP000078492    UP000092461    UP000027135    UP000078542    UP000007062    UP000075886    UP000069272    UP000075901    UP000075902    UP000000673    UP000075903    UP000076408    UP000009046    UP000007266    UP000007819    UP000183832    UP000002320    UP000075880    UP000075920    UP000245037    UP000053825    UP000242457    UP000053097    UP000008820    UP000075884    UP000078200    UP000092444    UP000092445    UP000091820    UP000092460    UP000092443    UP000037069    UP000192221    UP000001819    UP000000304    UP000076858    UP000002282    UP000008744    UP000008711    UP000001292    UP000095301    UP000000803    UP000001070    UP000069940    UP000249989    UP000007801    UP000192223    UP000268350    UP000008792    UP000009192    UP000095300    UP000007798    UP000092553    UP000076407   

PRIDE

Q9VWK6   

Pfam

PF10277   Frag1

Interpro

IPR039545   PGAP2        + More
IPR019402   Frag1/DRAM/Sfk1       

ProteinModelPortal

A0A2H1WMS1   A0A194Q6H7   A0A194RH70   A0A3S2LT06   A0A212FN71   A0A0L7LK26   + More
E2BE99   A0A3L8DZN3   E2AY65   A0A0J7L4M2   A0A232EYE4   A0A195FHX0   F4W6M0   A0A195BT91   A0A158P2C0   A0A151WZH1   K7J394   A0A310S624   A0A154P8B7   A0A1B6K390   A0A1B0D232   A0A088AT17   A0A1B6KWS3   V9II09   A0A195E453   A0A1B6D455   A0A1B0C963   A0A067QU53   A0A195D343   A0A1Y1LZG6   Q7QFI7   A0A182Q073   A0A182FJN5   A0A1S4G996   A0A182T1D5   A0A182UDC3   W5JJR9   A0A182VCX6   A0A182Y7T0   E0VDS0   A0A2S2PRS0   A0A2H8TF78   A0A139WMX4   J9K5G6   A0A1J1IAV6   B0XEF9   A0A182J1W4   A0A182W4J5   A0A2P8ZDR7   A0A0L7REW5   A0A2A3EGB2   A0A026WIA9   Q17L81   Q17MC8   A0A0A9XFM9   A0A182MZI3   A0A1A9VRZ8   W8C4G1   A0A1B0GBK3   A0A1A9ZII1   A0A1A9W6E0   A0A1B0BBG9   W8B6X4   A0A1A9XX05   A0A0L0C3K3   A0A0A1WXX5   A0A1W4V2H1   A0A0R3P0T4   B4R7C0   A0A0P5FP14   B4PWT2   B4GVF2   B3NUS9   B4I723   A0A1I8MJM9   Q9VWK6   B5DNA8   B4JKL7   A0A182GZN2   B3N151   A0A1W4X8N8   A0A1W4WZ93   A0A3B0K311   A0A0P6E2U7   A0A0C9PGL1   B4M1T1   A0A182GQU8   B4L8Q9   A0A1I8Q8Q1   B4NBY9   A0A0M3QYZ8   A0A182XE08   A0A034V9Y1   A0A224XIF8   A0A2R5LHF4   A0A0V0G8S7  

KEGG

101741111    no KO assigned | (RefSeq) post-GPI attachment to proteins factor 2-like

GO

GO:0000139   GO:0016021   GO:0005789   GO:0006506  

PANTHER

PTHR12892  

Subcellular location

Membrane  

Length:

281

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

112.08904

Exp number, first 60 AAs:

12.43005

Total prob of N-in:

0.85246

POSSIBLE N-term signal

sequence

inside

1  -  47

TMhelix

48  -  70

outside

71  -  99

TMhelix

100  -  122

inside

123  -  175

TMhelix

176  -  195

outside

196  -  209

TMhelix

210  -  229

inside

230  -  240

TMhelix

241  -  263

outside

264  -  281

 

 

Pi

18.25844

Theta

17.861101

Tajima's D

0.042557

CLR

0

CSRT

0.387630618469077

Interpretation

Uncertain