SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08030
Pre Gene Modal
BGIBMGA001129
Annotation
PREDICTED:_glucosylceramidase-like_[Amyelois_transitella]
Full name
Glucosylceramidase      
Location in the cell
Extracellular   Reliability : 1.047 Nuclear   Reliability : 1.282
 

Sequence

CDS
ATGACGGACTTGAACAACTTCGTCGTCCGCTGGATAGACTGGAATCTGTGTCTCGACCCTGAAGGTGGTCCAAACTGGGCCGATAATTTCGTTGACTCTCCCATCTTAGTGTACGGTGACAAAGATCAATTTATCAAGCAGCCAATGTTCTATGCCATGGGACACTTCTCCAAGTTCATATACAGAGGCTCAAGACGGATTCAGGTATCGCGTAGGAGTCTCGCTCCAATAGAGAACGTGGGACTTTTGACGCCCAACGAGGAGAACCTTTTGTTGGTCTTACAAAACAGGAGACAAAGAGAAGGCTAA
Protein
MTDLNNFVVRWIDWNLCLDPEGGPNWADNFVDSPILVYGDKDQFIKQPMFYAMGHFSKFIYRGSRRIQVSRRSLAPIENVGLLTPNEENLLLVLQNRRQREG

Summary

Catalytic Activity
a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + H2O = an N-acylsphing-4-enine + D-glucose
Similarity
Belongs to the glycosyl hydrolase 30 family.
Feature
chain  Glucosylceramidase
EC Number
3.2.1.45
EMBL
BABH01000464    BABH01000465    AGBW02010629    OWR48154.1    JTDY01002868    KOB70572.1    + More
KQ460397    KPJ15278.1    KQ459439    KPJ00977.1    ODYU01001475    SOQ37718.1    RSAL01002744    RVE40426.1    KQ461178    KPJ07772.1    LT635665    SGZ49395.1    BABH01038539    BABH01038540    BABH01038541    AGBW02013448    OWR43423.1    AGBW02010783    OWR47794.1    NWSH01000035    PCG80449.1    KL447118    KFO69884.1    KQ459602    KPI93190.1    KL218155    KFP02781.1    RCHS01001420    RMX53570.1    KL225872    KFM04297.1    KPJ07773.1    LMAW01001474    KQK83441.1    ABLF02008893    GCES01160813    JAQ25509.1    UYRR01031043    VDK44415.1    KZ508914    PKU34658.1    KK683358    KFQ13519.1    ODYU01002190    SOQ39362.1    QRBI01000202    RMB93898.1    UYYG01001177    VDN59158.1    GGMR01011734    MBY24353.1    KN125716    KFU83959.1    GCES01012212    JAR74111.1    IACK01152512    LAA93584.1    KN549912    KHJ95601.1    BABH01038531    BABH01038532    BABH01038533    BABH01038534    JT411533    JT418303    AHH42685.1    AEFK01161925    GCES01125017    JAQ61305.1    KZ349327    PIO65072.1    AERX01025232    KN610588    KHJ77613.1    MUZQ01000219    OWK55104.1    GCES01139623    JAQ46699.1    JOJR01000002    RCN53333.1    ODYU01004571    SOQ44585.1    KN550413    KHJ94226.1    LMAW01002883    KQK76089.1    HAED01019445    HAEE01008693    SBR05907.1    KL215229    KFV63808.1    HADZ01017496    SBP81437.1    HAEA01016548    SBQ45029.1    HAEC01013684    SBQ81901.1    HAEB01000173    SBQ46571.1    HADY01022016    HAEJ01018383    SBS58840.1    JPKZ01001512    UYWY01023004    KHN81497.1    VDM46971.1    AAQR03119144    AAQR03119145    GBYX01458341    JAO23212.1    OWR47828.1    GFFW01001008    JAV43780.1    CM012452    RVE62840.1    KQ042766    KKF10976.1   
Pfam
PF17725   YBD        + More
PF02055   Glyco_hydro_30
PF01285   TEA
PF17189   Glyco_hydro_30C
PF04103   CD20
PF10236   DAP3
Interpro
IPR000818   TEA/ATTS_dom        + More
IPR001139   Glyco_hydro_30       
IPR041086   YBD       
IPR038096   TEA/ATTS_sf       
IPR033453   Glyco_hydro_30_TIM-barrel       
IPR017853   Glycoside_hydrolase_SF       
IPR013780   Glyco_hydro_b       
IPR033452   GH30_C       
IPR007237   CD20-like       
IPR019368   Ribosomal_S23/S29_mit       
SUPFAM
SSF51445   SSF51445       
Gene 3D
PDB
2XWE     E-value=5.21078e-22,     Score=251

Ontologies

Topology

Length:
102
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0808200000000001
Exp number, first 60 AAs:
0.07005
Total prob of N-in:
0.37384
outside
1  -  102
 
 

Population Genetic Test Statistics

Pi
33.262151
Theta
31.669372
Tajima's D
0.294719
CLR
0.573367
CSRT
0.461276936153192
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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