Gene

KWMTBOMO08026

Pre Gene Modal

BGIBMGA001130

Annotation

PREDICTED:_zinc_transporter_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):13053994-13084444      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.29

CDS

ATGGGGAGGTATTCAGGAAAGAAATGTCGTCTCCTGTGCATGTTATGCCTAACAGGAGGCTTCTTCTTTGTGGAGCTGATTGTGGGTTACATTACCAATTCAATGGCCCTTGTAGCTGATTCATTTCATATGTTGAGTGATGTAGCAGCACTTATCATCGCCTTCTTGTCAGTCAAAATGTCACCAAAGAAATGGTCAAAGAACACTTTCGGCTGGGCTCGTGCTGAAGTTTTGGGCGCTCTCGTGAACGCAGTATTCTTGGTGGCTCTTTGCTTCAGTATTACAGTTGAGGCCGTTAAGAGGTTTATAGAGTTCGAAGTCATACATAACCCGAAACTCCTTGTCGCTGTCGGCAGTCTAGGTCTACTGTTGAACATTATAGGACTTTTTCTGTTTCACGATCACGGCGGACACGGTCACTCGCACGGTGGAGTTCCACCACCTTCGAATGTCCGACACCTCACCGAGATAGTGAACAGCAACGCTGACAGAGCACTCGGTCATAACTCAACGGACAACGAGGAAACCGATGAAATGGTTAAGAAGGCCAAAACGCAGAATCACAAGAGCTGCAAGAGTTCCAGTGATCCGGGACATATGAATATGAAGGGAGTCTTCCTTCACGTACTGTCCGACGCTTTGGGATCCCTGATCGTTGTAGGCTCGGCCCTGGTCGTGTGGCTGACGGAGTGGAAGTACAAACACTACATCGACCCTGCTCTGAGTATAGTGCTCGTTATATTGATTCTGGCCTCGGTGTGGCCTCTGCTCAGGGAGTCTTCGCTGATCCTCCTCCAAACTGTGCCCACGCATATTCAAGTGGACGCGATACAAAGGCGACTCAAAAACGTTGAAGGGGTAATGGCCGTTCACGAGTTTCACGTGTGGCAGCTCGCCGGCGACAGAATTATAGCGAGTGCTCATATCAGATGTCGCAACCTGTCTGAATATATGAAGATAGCCGAGAAAGTCAAAGAATTCTTTCACAACGAAGGTATTCACTCTACGACGATACAGCCGGAATTCGTTGAAGGACCTCAAGACGAAAATGAAAATCAGAGCGGGGCGATAGAAGCACCGTGCGCTCTTCACTGTCCACCCAATGACTTGTGCCACAACGCCACGTGTTGCGGTCCCAATCAGCAGGAGACATTAACACCGCCTGCGGCAGTCACGCCGTATATGTGTAGACAGAGGAACATGGCGTCTCGATCGGAGTCCGTCTCCTCAAATATCGCCGGCAACGCACCCAAGCCTGGGTGGAACCTGGAAGCCCTCGAATGCGGTTCCTTGCTACCGTCGCCACTGGACGGTAGGCTGACCGTCTGA

Protein

MGRYSGKKCRLLCMLCLTGGFFFVELIVGYITNSMALVADSFHMLSDVAALIIAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEAVKRFIEFEVIHNPKLLVAVGSLGLLLNIIGLFLFHDHGGHGHSHGGVPPPSNVRHLTEIVNSNADRALGHNSTDNEETDEMVKKAKTQNHKSCKSSSDPGHMNMKGVFLHVLSDALGSLIVVGSALVVWLTEWKYKHYIDPALSIVLVILILASVWPLLRESSLILLQTVPTHIQVDAIQRRLKNVEGVMAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKIAEKVKEFFHNEGIHSTTIQPEFVEGPQDENENQSGAIEAPCALHCPPNDLCHNATCCGPNQQETLTPPAAVTPYMCRQRNMASRSESVSSNIAGNAPKPGWNLEALECGSLLPSPLDGRLTV

Uniprot

A0A2H1VAA0   A0A212F361   A0A194Q7K3   H9IV50   J9KAI4   A0A2H8TTW2   + More
A0A158NA36   E9IXL9   F4WC25   A0A1B6EC00   A0A2A3EAT6   A0A026VWY4   A0A0N0BJZ0   A0A195BK82   A0A195FQQ9   E2A5R6   A0A151WWP7   A0A1I8PAC3   A0A1Y1K3C1   A0A0L0BWK6   A0A1I8NHC7   B3M6X4   A0A2S2R231   A0A232F9B5   A0A0A1WYK5   A0A1B6JC35   A0A034W8Z4   W8BDB8   A0A1B6FNP7   A0A1L8EH32   A0A0K8V3F5   A0A088AFM1   A0A0M5IZ56   A0A1L8DE99   U4UW93   A0A2J7R372   D3TRG0   A0A0A9VZA1   A0A1A9X0I4   U5EVT6   A0A1B0A6D6   A0A1B0GAQ5   A0A1B6D2D7   A0A067RWP4   A0A0L7R4L5   A0A0K8SMC8   D2A2K8   E2B883   A0A0C9RA00   A0A139WJ05   B4IZK6   A0A1W4X0T0   B4H5F7   A0A3B0JYV8   A0A195CUU3   A0A0T6AUI8   Q29ES8   B4MMB1   B4LHN0   K7J6I8   Q7K3K5   B3NBU3   B4KW93   A0A1W4W271   B4QPG8   A0A1W4VP64   M9PEG6   A0A336LHN9   B4PGN5   A0A0J9UDM6   A0A0P4W293   A0A2P6L363   A0A087SVK5   A0A2J7R382   A0A2M4ASA7   A0A2M4CZV7   A0A182P6D2   A0A182N8C3   A0A2M4BP10   T1HN48   A0A1D2MWD8   B0WK02   A0A182J7M2   A0A023ESC3   A0A182JP46   Q7Q6C8   A0A182I204   A0A182TMU7   A0A182KPS0   A0A182X6X9   A0A182Y2U9   A0A1Q3FGZ1   A0A084W2L4   W5JUV6   A0A087UZ41   A0A182FDW6   B0XH15   A0A182WK01   A0A2M4BNP4   A0A182RF04  

Pubmed

22118469    26354079    19121390    21347285    21282665    21719571    + More
24508170    30249741    20798317    28004739    26108605    25315136    17994087    28648823    25830018    25348373    24495485    23537049    20353571    25401762    26823975    24845553    18362917    19820115    15632085    20075255    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    27289101    24945155    12364791    14747013    17210077    20966253    25244985    24438588    20920257    23761445   

EMBL

ODYU01001475    SOQ37716.1    AGBW02010629    OWR48152.1    KQ459439    KPJ00975.1    + More
BABH01000467    BABH01000468    BABH01000469    BABH01000470    ABLF02036874    ABLF02036875    ABLF02036876    GFXV01005594    MBW17399.1    ADTU01009957    GL766762    EFZ14660.1    GL888070    EGI68005.1    GEDC01012115    GEDC01001839    JAS25183.1    JAS35459.1    KZ288301    PBC28847.1    KK107871    QOIP01000007    EZA47369.1    RLU20200.1    KQ435710    KOX79818.1    KQ976455    KYM85102.1    KQ981305    KYN42920.1    GL437023    EFN71263.1    KQ982686    KYQ52313.1    GEZM01099355    GEZM01099353    JAV53367.1    JRES01001238    KNC24413.1    CH902618    EDV39810.2    GGMS01014627    MBY83830.1    NNAY01000638    OXU27255.1    GBXI01011954    GBXI01010804    JAD02338.1    JAD03488.1    GECU01014221    GECU01011039    JAS93485.1    JAS96667.1    GAKP01008186    GAKP01008185    JAC50767.1    GAMC01007265    GAMC01007264    JAB99290.1    GECZ01018136    JAS51633.1    GFDG01000844    JAV17955.1    GDHF01030677    GDHF01021070    GDHF01018880    GDHF01014591    GDHF01004497    JAI21637.1    JAI31244.1    JAI33434.1    JAI37723.1    JAI47817.1    CP012525    ALC44924.1    GFDF01009295    JAV04789.1    KB632390    ERL94510.1    NEVH01007822    PNF35274.1    EZ424012    ADD20288.1    GBHO01045659    GDHC01007826    GDHC01006329    JAF97944.1    JAQ10803.1    JAQ12300.1    GANO01003264    JAB56607.1    CCAG010015501    GEDC01017436    JAS19862.1    KK852417    KDR24334.1    KQ414657    KOC65788.1    GBRD01011874    JAG53950.1    KQ971338    EFA02213.2    GL446286    EFN88085.1    GBYB01009787    JAG79554.1    KYB27845.1    CH916366    EDV97781.1    CH479211    EDW33009.1    OUUW01000012    SPP87255.1    KQ977276    KYN04453.1    LJIG01022764    KRT78835.1    CH379070    EAL29982.2    CH963847    EDW73256.2    CH940647    EDW69583.2    AE014296    AY058521    AAF47754.1    AAF47755.1    AAL13750.1    AAN11554.1    AAN11555.1    AAN11556.1    AGB94060.1    CH954178    EDV50760.2    CH933809    EDW18500.2    CM000363    EDX09061.1    AGB94059.1    UFQS01000004    UFQT01000004    SSW96873.1    SSX17260.1    CM000159    EDW93253.2    CM002912    KMY97325.1    GDRN01098043    JAI59038.1    MWRG01002141    PRD33013.1    KK112167    KFM56894.1    PNF35275.1    GGFK01010343    MBW43664.1    GGFL01006684    MBW70862.1    GGFJ01005540    MBW54681.1    ACPB03006312    LJIJ01000455    ODM97326.1    DS231966    EDS29546.1    GAPW01001450    JAC12148.1    AAAB01008960    EAA11932.4    APCN01000103    GFDL01008219    JAV26826.1    ATLV01019630    KE525275    KFB44458.1    ADMH02000425    ETN66549.1    KK122387    KFM82630.1    DS233085    EDS27983.1    GGFJ01005491    MBW54632.1   

Proteomes

UP000007151    UP000053268    UP000005204    UP000007819    UP000005205    UP000007755    + More
UP000242457    UP000053097    UP000279307    UP000053105    UP000078540    UP000078541    UP000000311    UP000075809    UP000095300    UP000037069    UP000095301    UP000007801    UP000215335    UP000005203    UP000092553    UP000030742    UP000235965    UP000091820    UP000092445    UP000092444    UP000027135    UP000053825    UP000007266    UP000008237    UP000001070    UP000192223    UP000008744    UP000268350    UP000078542    UP000001819    UP000007798    UP000008792    UP000002358    UP000000803    UP000008711    UP000009192    UP000192221    UP000000304    UP000002282    UP000054359    UP000075885    UP000075884    UP000015103    UP000094527    UP000002320    UP000075880    UP000075881    UP000007062    UP000075840    UP000075902    UP000075882    UP000076407    UP000076408    UP000030765    UP000000673    UP000069272    UP000075920    UP000075900   

PRIDE

H9IV50    Q7K3K5    M9PEG6   

Pfam

PF01545   Cation_efflux        + More
PF07947   YhhN

Interpro

IPR027469   Cation_efflux_TMD_sf        + More
IPR036837   Cation_efflux_CTD_sf       
IPR002524   Cation_efflux       
IPR012506   YhhN       
IPR016024   ARM-type_fold       

SUPFAM

SSF161111   SSF161111        + More
SSF160240   SSF160240       
SSF48371   SSF48371       

Gene 3D

1.20.1510.10    

ProteinModelPortal

A0A2H1VAA0   A0A212F361   A0A194Q7K3   H9IV50   J9KAI4   A0A2H8TTW2   + More
A0A158NA36   E9IXL9   F4WC25   A0A1B6EC00   A0A2A3EAT6   A0A026VWY4   A0A0N0BJZ0   A0A195BK82   A0A195FQQ9   E2A5R6   A0A151WWP7   A0A1I8PAC3   A0A1Y1K3C1   A0A0L0BWK6   A0A1I8NHC7   B3M6X4   A0A2S2R231   A0A232F9B5   A0A0A1WYK5   A0A1B6JC35   A0A034W8Z4   W8BDB8   A0A1B6FNP7   A0A1L8EH32   A0A0K8V3F5   A0A088AFM1   A0A0M5IZ56   A0A1L8DE99   U4UW93   A0A2J7R372   D3TRG0   A0A0A9VZA1   A0A1A9X0I4   U5EVT6   A0A1B0A6D6   A0A1B0GAQ5   A0A1B6D2D7   A0A067RWP4   A0A0L7R4L5   A0A0K8SMC8   D2A2K8   E2B883   A0A0C9RA00   A0A139WJ05   B4IZK6   A0A1W4X0T0   B4H5F7   A0A3B0JYV8   A0A195CUU3   A0A0T6AUI8   Q29ES8   B4MMB1   B4LHN0   K7J6I8   Q7K3K5   B3NBU3   B4KW93   A0A1W4W271   B4QPG8   A0A1W4VP64   M9PEG6   A0A336LHN9   B4PGN5   A0A0J9UDM6   A0A0P4W293   A0A2P6L363   A0A087SVK5   A0A2J7R382   A0A2M4ASA7   A0A2M4CZV7   A0A182P6D2   A0A182N8C3   A0A2M4BP10   T1HN48   A0A1D2MWD8   B0WK02   A0A182J7M2   A0A023ESC3   A0A182JP46   Q7Q6C8   A0A182I204   A0A182TMU7   A0A182KPS0   A0A182X6X9   A0A182Y2U9   A0A1Q3FGZ1   A0A084W2L4   W5JUV6   A0A087UZ41   A0A182FDW6   B0XH15   A0A182WK01   A0A2M4BNP4   A0A182RF04  

KEGG

101740873    K14688 solute carrier family 30 (zinc transporter), member 1 | (RefSeq) zinc transporter 1

GO

GO:0016021   GO:0008324   GO:0005886   GO:0006882   GO:0016323   GO:0016324   GO:0022883   GO:0010312   GO:0005385   GO:0071577   GO:0055069   GO:0006812   GO:0016020   GO:0005524   GO:0006412   GO:0016876   GO:0043039   GO:0055085  

Length:

442

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

110.97752

Exp number, first 60 AAs:

26.18534

Total prob of N-in:

0.97157

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  69

TMhelix

70  -  92

inside

93  -  112

TMhelix

113  -  132

outside

133  -  205

TMhelix

206  -  228

inside

229  -  239

TMhelix

240  -  257

outside

258  -  442

 

 

Pi

21.22647

Theta

23.958648

Tajima's D

-2.476229

CLR

1.203714

CSRT

0.00119994000299985

Interpretation

Uncertain