Gene

KWMTBOMO08024  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001131

Annotation

PREDICTED:_exosome_complex_component_RRP45_[Amyelois_transitella]

Location

Bomo_Chr13(-):13021440-13026094      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.424

CDS

ATGCGTGATACTTGTTTATCGAATTGTGAAAAGAATTTCATACAAAAGATCGTATCTCAAGGACATCGCTTGGACGGTCGAAATTTTAATGAAACCCGAAAACTAGATATATCATTTGGTTCTGAATATGGTTGCTGTATTGTGTCTTTGGGAGAAACGAAGATCCTATCAGAAGTCACATGTGAAGTCGCTCAGCCAAAACAAATAAGACCAAATGAAGGCATCATATTTATTAATGTTGAACTTAATCCTATGGCCGCTCCACAGTTTGAAGCCAATAGACAAACAGATCTCACTGTTTATCTTGTAAGATTATTAGAAAAATGTTACAAAGATTCAAAATGCATAGACCTGGAATCACTCTGCATTGTAGTAGAAGAAAAGGTTTGGTCTTTAAGAATTAATATTAAAGTTCTAAACCATGATGGTAACTTAACTGAATGTGCAAGTATAGCTACACTTGCCTCAATAGCACACTTTAGGAGACCTGACTTTACAAGAGATGGTGACCGAGTGATTATTCACACATTAACTGAGAAAGACCCAATACCAACAGTTTTGTATCATTATCCTGTGTGTACAACTTTTGCATTGTACAGTAATGATATCTTACTCACCGATCCTAATTTCCTGGAAGAATCAGTGTGTACAAGTAATACAGAGGAAGGCATCAACACTGCAGGAGGCCTCCTGGTTTTGGGAATGAATCAATATAGAGAAGTATGTTTACTTGATTTGACAGGAGCTGCAATATACACATCTAATATAGTTCATAAAGCGCTTCTGAGTGCTGCAGACAAATGTAAAAAATATGTGGAAATTATAAAAAATGCCGTTGCCAAGGATGACAACTTGAGGCAAAAACGTGAAAAAATAAACTTTTCAGATATTATTACGACAGAACATATGCTTGCTTTAAGTAGAAAGGATCTTAACATACAACTCAAACACTATGATGTGACTGAATTAGATGAGAAAGATGAAGAAATGTTTAGTGATGAGGATGATATTAAACCAGAGCCAAGCAAATATGATGTTGTTGCAACAGTTCCCAACACAGCGGAGTTGAAATCAAAAGAAGGTAAATCAGAGTGGATAGAAGTATCATCAGATTCTGGAGAGGATTAA

Protein

MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALYSNDILLTDPNFLEESVCTSNTEEGINTAGGLLVLGMNQYREVCLLDLTGAAIYTSNIVHKALLSAADKCKKYVEIIKNAVAKDDNLRQKREKINFSDIITTEHMLALSRKDLNIQLKHYDVTELDEKDEEMFSDEDDIKPEPSKYDVVATVPNTAELKSKEGKSEWIEVSSDSGED

Uniprot

H9IV51   A0A3S2NUG6   A0A2H1VBU5   A0A194Q609   A0A212F343   A0A2A4J7N7   + More
A0A0L7LF16   A0A2P8ZAQ6   W5JGN2   U5EZA1   A0A182JHE8   A0A0P6J4R2   D2A364   A0A088A8Y2   A0A182FR76   A0A154PLW8   A0A023ERB0   A0A084W6W8   A0A1S3DFG9   A0A2A3E680   A0A1Q3FVU6   A0A182QA30   A0A2M4BNK2   A0A2M4BNQ0   A0A182GIW7   A0A182K3S7   A0A2M4ATX8   A0A026WP79   A0A0M8ZVG4   A0A182MF13   A0A182RCV8   A0A182PA21   E2AE05   A0A182Y7A3   A0A0L7RKD4   A0A336LV03   A0A336MRQ4   A0A182XID5   A0A2M4BT53   A0A182TEC4   Q7QBX4   A0A182V5Q5   A0A0J7L4W8   A0A182LFG9   A0A182T0Q0   A0A1I8M0T5   A0A195E8B5   A0A182VQ89   F4WEJ9   E0V994   A0A195AVE1   A0A1A9W695   A0A182N4M5   A0A195C436   A0A158NF39   A0A0K8VZ76   A0A151WQ50   A0A195FLT8   A0A0K8V8P5   V4CI52   A0A0K8UPU2   A0A1A9YMB4   K7J2T7   A0A0K8WH54   A0A232EGH6   A0A1B0B6K8   A0A2J7PFL5   A0A1A9UZH8   A0A182HTC0   E2B3I7   E9IFL9   A0A034VUD5   A0A0L0BKU4   A0A0Q3X8G6   W8AYB9   D3TN95   A0A1A9ZB06   A0A3B4B6B4   A0A3P8W8B4   A0A1W4YI85   A0A3B4B6B9   A0A3Q3KEA1   A0A3Q3DYQ4   I3J5Z0   A0A1L8DXT3   A0A1L8DXN8   A0A3B4TAA0   A0A1B0D1D6   A0A3B4YUS7   A0A3P8PIH4   A0A3P9BZJ5   A0A3Q2UT73   R7V511   A0A0A1XA03   A0A3Q4HVM1   A0A1B0GAB0   A0A3Q2WJ37   A0A3P8PIN9   A0A3P9C068  

Pubmed

19121390    26354079    22118469    26227816    29403074    20920257    + More
23761445    26999592    18362917    19820115    24945155    24438588    26483478    24508170    30249741    20798317    25244985    12364791    14747013    17210077    20966253    25315136    21719571    20566863    21347285    23254933    20075255    28648823    21282665    25348373    26108605    24495485    20353571    25463417    24487278    25186727    25830018   

EMBL

BABH01000476    RSAL01000074    RVE48971.1    ODYU01001475    SOQ37714.1    KQ459439    + More
KPJ00972.1    AGBW02010629    OWR48151.1    NWSH01002836    PCG67460.1    JTDY01001472    KOB73781.1    PYGN01000121    PSN53584.1    ADMH02001587    ETN61954.1    GANO01001164    JAB58707.1    GDUN01000838    JAN95081.1    KQ971338    EFA01958.1    KQ434943    KZC12220.1    GAPW01001900    JAC11698.1    ATLV01020999    KE525311    KFB45962.1    KZ288379    PBC26561.1    GFDL01003370    JAV31675.1    AXCN02000051    GGFJ01005451    MBW54592.1    GGFJ01005452    MBW54593.1    JXUM01012632    KQ560358    KXJ82846.1    GGFK01010851    MBW44172.1    KK107154    QOIP01000001    EZA56904.1    RLU27199.1    KQ435827    KOX71950.1    AXCM01001115    GL438827    EFN68238.1    KQ414573    KOC71294.1    UFQS01000110    UFQT01000110    SSW99787.1    SSX20167.1    UFQT01001536    SSX30957.1    GGFJ01006807    MBW55948.1    AAAB01008859    EAA07626.5    LBMM01000713    KMQ97666.1    KQ979479    KYN21356.1    GL888103    EGI67362.1    DS234991    EEB09950.1    KQ976736    KYM76027.1    KQ978287    KYM95619.1    ADTU01013728    GDHF01008165    JAI44149.1    KQ982854    KYQ49815.1    KQ981490    KYN41383.1    GDHF01017151    JAI35163.1    KB200367    ESP01820.1    GDHF01023713    JAI28601.1    GDHF01001828    JAI50486.1    NNAY01004752    OXU17465.1    JXJN01009136    JXJN01009137    NEVH01025655    PNF15122.1    APCN01000438    GL445346    EFN89739.1    GL762865    EFZ20634.1    GAKP01012878    JAC46074.1    JRES01001705    KNC20696.1    LMAW01000230    KQL59939.1    GAMC01015443    JAB91112.1    EZ422897    ADD19173.1    AERX01019076    GFDF01002826    JAV11258.1    GFDF01002857    JAV11227.1    AJVK01002581    AMQN01005077    KB295063    ELU13639.1    GBXI01006799    JAD07493.1    CCAG010021886   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000218220    UP000037510    + More
UP000245037    UP000000673    UP000075880    UP000007266    UP000005203    UP000069272    UP000076502    UP000030765    UP000079169    UP000242457    UP000075886    UP000069940    UP000249989    UP000075881    UP000053097    UP000279307    UP000053105    UP000075883    UP000075900    UP000075885    UP000000311    UP000076408    UP000053825    UP000076407    UP000075902    UP000007062    UP000075903    UP000036403    UP000075882    UP000075901    UP000095301    UP000078492    UP000075920    UP000007755    UP000009046    UP000078540    UP000091820    UP000075884    UP000078542    UP000005205    UP000075809    UP000078541    UP000030746    UP000092443    UP000002358    UP000215335    UP000092460    UP000235965    UP000078200    UP000075840    UP000008237    UP000037069    UP000051836    UP000092445    UP000261520    UP000265120    UP000192224    UP000261600    UP000264820    UP000005207    UP000261420    UP000092462    UP000261360    UP000265100    UP000265160    UP000264840    UP000014760    UP000261580    UP000092444   

PRIDE

H9IV51   

Pfam

PF01138   RNase_PH        + More
PF03725   RNase_PH_C
PF01979   Amidohydro_1

Interpro

IPR001247   ExoRNase_PH_dom1        + More
IPR027408   PNPase/RNase_PH_dom_sf       
IPR033100   Rrp45       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR036345   ExoRNase_PH_dom2_sf       
IPR015847   ExoRNase_PH_dom2       
IPR003764   GlcNAc_6-P_deAcase       
IPR032466   Metal_Hydrolase       
IPR006680   Amidohydro-rel       
IPR011059   Metal-dep_hydrolase_composite       

SUPFAM

SSF54211   SSF54211        + More
SSF55666   SSF55666       
SSF51556   SSF51556       
SSF51338   SSF51338       

Gene 3D

3.30.230.70     2.30.40.10    

CDD

cd11368  RNase_PH_RRP45
cd00854  NagA

ProteinModelPortal

H9IV51   A0A3S2NUG6   A0A2H1VBU5   A0A194Q609   A0A212F343   A0A2A4J7N7   + More
A0A0L7LF16   A0A2P8ZAQ6   W5JGN2   U5EZA1   A0A182JHE8   A0A0P6J4R2   D2A364   A0A088A8Y2   A0A182FR76   A0A154PLW8   A0A023ERB0   A0A084W6W8   A0A1S3DFG9   A0A2A3E680   A0A1Q3FVU6   A0A182QA30   A0A2M4BNK2   A0A2M4BNQ0   A0A182GIW7   A0A182K3S7   A0A2M4ATX8   A0A026WP79   A0A0M8ZVG4   A0A182MF13   A0A182RCV8   A0A182PA21   E2AE05   A0A182Y7A3   A0A0L7RKD4   A0A336LV03   A0A336MRQ4   A0A182XID5   A0A2M4BT53   A0A182TEC4   Q7QBX4   A0A182V5Q5   A0A0J7L4W8   A0A182LFG9   A0A182T0Q0   A0A1I8M0T5   A0A195E8B5   A0A182VQ89   F4WEJ9   E0V994   A0A195AVE1   A0A1A9W695   A0A182N4M5   A0A195C436   A0A158NF39   A0A0K8VZ76   A0A151WQ50   A0A195FLT8   A0A0K8V8P5   V4CI52   A0A0K8UPU2   A0A1A9YMB4   K7J2T7   A0A0K8WH54   A0A232EGH6   A0A1B0B6K8   A0A2J7PFL5   A0A1A9UZH8   A0A182HTC0   E2B3I7   E9IFL9   A0A034VUD5   A0A0L0BKU4   A0A0Q3X8G6   W8AYB9   D3TN95   A0A1A9ZB06   A0A3B4B6B4   A0A3P8W8B4   A0A1W4YI85   A0A3B4B6B9   A0A3Q3KEA1   A0A3Q3DYQ4   I3J5Z0   A0A1L8DXT3   A0A1L8DXN8   A0A3B4TAA0   A0A1B0D1D6   A0A3B4YUS7   A0A3P8PIH4   A0A3P9BZJ5   A0A3Q2UT73   R7V511   A0A0A1XA03   A0A3Q4HVM1   A0A1B0GAB0   A0A3Q2WJ37   A0A3P8PIN9   A0A3P9C068  

PDB

2NN6     E-value=7.28868e-70,     Score=670

KEGG

105842115    no KO assigned | (RefSeq) uncharacterized protein K02A2.6-like

GO

GO:0006396   GO:0000178   GO:0004527   GO:0071042   GO:0000176   GO:0017091   GO:0034476   GO:0000177   GO:0034475   GO:0034473   GO:0034427   GO:0071038   GO:0071035   GO:0016075   GO:0071028   GO:0000467   GO:0043928   GO:0008448   GO:0006044   GO:0008233   GO:0016021   GO:0016020   GO:0005524   GO:0006412   GO:0016876   GO:0043039  

Length:

375

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03574

Exp number, first 60 AAs:

0.00081

Total prob of N-in:

0.02748

outside

1  -  375

 

 

Pi

16.961168

Theta

15.694031

Tajima's D

0.07285

CLR

11.823968

CSRT

0.40017999100045

Interpretation

Uncertain