Gene
KWMTBOMO08022 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001132
Annotation
PREDICTED:_HMGB_protein_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 3.85
Sequence
CDS
ATGTCTAATTCTAACACAAGGGAAGCTTCACCTCAGCAACAATGGTGGTACTCATCAGGAGGTGTAGACTCACAACAAGCATCTTCACCGACGTCGCAGAATCAGTCAAATCAAGAAAGCGATCAAAACAATCAACAAGCGAACGGTATTCAACAGAGTCATCAGTCGATCCAACAACAACAGCAGCAGGAGCAAAATCAAACTATTCAACAGCAACAAAGTCAATTACAACAGCAGTTGCAGCAACAACAGAATCTCCAGCAAGCTTTGCAACAGCAGAACCAATCTTTGCAGCAGTCGTTACAACAACAACAACAACAGCAGCAACAAGAAGAGCAGCAACCGACCCTGCAGCAGATGCTACAGCAGCATCAACAGCAGCAGCACCAAGGCTTACAACAAACTTTGCAGCAGACATTGCAAGTTAGTCAGGCTCAAGCCCAAGCAATAGCGCAAGCCCAAGCAGCCTTACAGCACCAAGTTGCTCAATCAATACAGCAGCAACAACAAACTCTACAAGAACACATTCAAGCTGTTCAGCAACAACAGATACAGGCAGCATTACAGAGGCAATCTGCCACTCTACAGGAGCTGCAGCAACAGGCACAGCAGCAAGCTTTACAGCAAGCAACAGTAAATAAGGCCAGGATGCCCCGTTCAAGGCCATACAACAAGCCCCGCGGTCGCATGACAGCTTATGCATTCTTTGTGCAGACGTGCCGAGAAGAACACAAGAAGAAATACCCTGATGTCAGTGTTATATTTGCAGCATTCTCGAAAAAGTGCGCAGAGAGGTGGAATACAATGTCGGAAAAAGAAAAACAGCGGTTCCATGAGATGGCTGAACAGGACAAGCATCGATTCGACTTGGAGATGCAGAACTATGTACCACCAAAGGACATGAAGGTCAGAGGGCGAAAGAGGCAGCAGATGAAAGACCCTAATGCACCAAAGCGCTCGCTATCAGCATTCTTTTTGTTTTGCAACGATGAACGTTCGAAGGTGAAAGCTGGCAACCCAGAGTACACCATGGGCGATATTGCGAAGGAACTCGGCAGACGTTGGGCGGCCGCTGATCCGGAGACTAAGGCTAAATATGACGCGCTATCTGAAAAAGACAAGGCGCGATATGATAGGGAAATGACAGCGTACAAGAAAGGTCCGTTAGCTCAGCCGCCGCCACAGCCGCCTGTCGTCCCCGCCATCGAGGACGAGGGCGGAGACTTCGATGCAGACGAAGAATACAATTGA
Protein
MSNSNTREASPQQQWWYSSGGVDSQQASSPTSQNQSNQESDQNNQQANGIQQSHQSIQQQQQQEQNQTIQQQQSQLQQQLQQQQNLQQALQQQNQSLQQSLQQQQQQQQQEEQQPTLQQMLQQHQQQQHQGLQQTLQQTLQVSQAQAQAIAQAQAALQHQVAQSIQQQQQTLQEHIQAVQQQQIQAALQRQSATLQELQQQAQQQALQQATVNKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYDALSEKDKARYDREMTAYKKGPLAQPPPQPPVVPAIEDEGGDFDADEEYN
Summary
Uniprot
ProteinModelPortal
PDB
6CIM
E-value=8.0012e-36,
Score=377
Ontologies
PATHWAY
GO
Topology
Length:
416
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01974
outside
1 - 416
Population Genetic Test Statistics
Pi
14.179236
Theta
15.811965
Tajima's D
-0.658573
CLR
1.03593
CSRT
0.210789460526974
Interpretation
Uncertain
