Gene

KWMTBOMO08015

Annotation

PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]

Location

Bomo_Chr13(+):12317344-12318342      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.25 Nuclear   Reliability : 1.793

CDS

ATGAATCCACTTGAATCTTCACTGGCTGAGATGTCAGAGCTGTTTAATGCACGTATGGCGAAGTTCGAAGCCCAGCTCAACAAGTCTCCAGAACTATCAACCACATCATCAAGTTTGGCATTGGAATTTTCGTCATTTCGGGCATTCATTACTGAGGCACTTAATAACTTGCAACAGCAGGTGGAGATGCTCGCGCGCATGCAGGATAATACAGAGACTCGCAGCCGTAGAAAAATGTTGATCATTCACGGAGTAGCTGAGACTAAGGGTGAGCAAATTGAACAGGTATTGTCTAATTTCATAGGCAGTCATCTTGCTTTGGCCGAGTTCTCCTCAGCTGATATTAGAAGATGTCACCGTATGAATAGATTGTCAACATCCGAAGGCTCTCGTCCCATACTGATAAAATTCCAAACGTATGAAATGCGCAGTCAAGTTTGGTTTTCTAAAACAAAACTAAAGGGTACCGGCTTTACTATTTCGGAGTTTCTGACGAAAGCGCGGCACGACATTTTCATGGCTGCACGGAGTAGATTCGGCATGAAGAAGGTCTGGACCAAGGATGGCTGTGTCTACATTTTGGGAGCGGATGGCATCAAACATCGCGTCGTTACACATCGAGATCTTAATCATCTTCAAAAGAACACATCGGAGGCAGTCCCTGAGGTTGATGCTCATAAGCGTGCTGTTACAAAACCGGCTGTGGTAAAGGCAAAGCGCGCTGCTGCTAGAAAGTGA

Protein

MNPLESSLAEMSELFNARMAKFEAQLNKSPELSTTSSSLALEFSSFRAFITEALNNLQQQVEMLARMQDNTETRSRRKMLIIHGVAETKGEQIEQVLSNFIGSHLALAEFSSADIRRCHRMNRLSTSEGSRPILIKFQTYEMRSQVWFSKTKLKGTGFTISEFLTKARHDIFMAARSRFGMKKVWTKDGCVYILGADGIKHRVVTHRDLNHLQKNTSEAVPEVDAHKRAVTKPAVVKAKRAAARK

Uniprot

A0A2A4J0P1   A0A2A4JPZ6   A0A2A4JP60   A0A2W1AYL0   A0A2A4JF70   A0A2W1C1G2   + More
A0A2H1W7N3   A0A0L7KPM5   A0A0L7L318   A0A0L7KIU7   A0A0L7K490   A0A2H1X0E0   H9JND1   A0A0L7KW56   A0A0L7K245   A0A0L7LEM3   A0A0L7KMJ9   A0A2H1VLT4   A0A0L7KXD0   A0A0L7K1Y0   A0A0L7L7Q1   A0A0L7LF72   S4PY07   A0A2H1W136   A0A0L7KXE0   A0A2W1B638   A0A2A4JRK8   A0A2A4JAE4   A0A0L7KZD4   A0A2W1BHY6   A0A0L7KWV6   A0A0L7LRK8   A0A2A4JKL5   A0A2A4JSS2   A0A2A4J7K0   A0A2A4JNA4   A0A2A4JVB8   A0A2W1BPW3   A0A2A4JVW6   A0A2A4K0M9   A0A2A4JIA9   A0A2A4ISJ1   A0A2W1BKL8   A0A3S2N3S1   A0A0L7LN09   A0A0L7LT08   A0A1S3DR71   A0A2A4IZX0  

Pubmed

28756777    26227816    19121390    23622113   

EMBL

NWSH01004248    PCG65306.1    NWSH01000800    PCG74117.1    NWSH01000964    PCG73374.1    + More
KZ150737    PZC70349.1    NWSH01001639    PCG70611.1    KZ149916    PZC77943.1    ODYU01006869    SOQ49099.1    JTDY01007405    KOB65227.1    JTDY01003374    KOB69654.1    JTDY01009601    KOB63242.1    JTDY01010801    JTDY01009435    KOB57999.1    KOB63512.1    ODYU01012456    SOQ58773.1    BABH01019446    BABH01019447    BABH01019448    BABH01019449    BABH01019450    JTDY01005020    KOB67468.1    JTDY01015832    KOB51930.1    JTDY01001444    KOB73845.1    JTDY01009052    KOB64154.1    ODYU01003266    SOQ41795.1    JTDY01004770    KOB67785.1    JTDY01016995    KOB51870.1    JTDY01002460    KOB71369.1    KOB73846.1    GAIX01004118    JAA88442.1    ODYU01005692    SOQ46801.1    JTDY01004617    KOB67938.1    KZ150731    PZC70355.1    NWSH01000709    PCG74665.1    NWSH01002122    PCG69097.1    JTDY01004162    KOB68510.1    KZ150113    PZC73314.1    JTDY01004815    JTDY01001265    KOB67717.1    KOB74342.1    JTDY01000235    KOB78128.1    NWSH01001172    PCG72268.1    NWSH01000695    PCG74738.1    NWSH01002863    PCG67420.1    NWSH01000981    PCG73266.1    NWSH01000574    PCG75564.1    KZ149998    PZC75357.1    NWSH01000512    PCG75926.1    NWSH01000281    PCG77797.1    NWSH01001465    PCG71162.1    PCG71163.1    NWSH01008089    PCG62701.1    KZ150083    PZC73827.1    RSAL01001827    RVE40669.1    JTDY01000521    KOB76815.1    JTDY01000147    KOB78598.1    NWSH01004711    PCG64730.1   

Proteomes

UP000218220    UP000037510    UP000005204    UP000283053    UP000079169   

PRIDE

H9JND1   

Pfam

PF01582   TIR        + More
PF00027   cNMP_binding
PF14529   Exo_endo_phos_2

Interpro

IPR004244   Transposase_22        + More
IPR035897   Toll_tir_struct_dom_sf       
IPR000157   TIR_dom       
IPR000595   cNMP-bd_dom       
IPR014710   RmlC-like_jellyroll       
IPR018490   cNMP-bd-like       
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       

SUPFAM

SSF52200   SSF52200        + More
SSF51206   SSF51206       
SSF56219   SSF56219       

Gene 3D

3.40.50.10140     2.60.120.10     3.60.10.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

A0A2A4J0P1   A0A2A4JPZ6   A0A2A4JP60   A0A2W1AYL0   A0A2A4JF70   A0A2W1C1G2   + More
A0A2H1W7N3   A0A0L7KPM5   A0A0L7L318   A0A0L7KIU7   A0A0L7K490   A0A2H1X0E0   H9JND1   A0A0L7KW56   A0A0L7K245   A0A0L7LEM3   A0A0L7KMJ9   A0A2H1VLT4   A0A0L7KXD0   A0A0L7K1Y0   A0A0L7L7Q1   A0A0L7LF72   S4PY07   A0A2H1W136   A0A0L7KXE0   A0A2W1B638   A0A2A4JRK8   A0A2A4JAE4   A0A0L7KZD4   A0A2W1BHY6   A0A0L7KWV6   A0A0L7LRK8   A0A2A4JKL5   A0A2A4JSS2   A0A2A4J7K0   A0A2A4JNA4   A0A2A4JVB8   A0A2W1BPW3   A0A2A4JVW6   A0A2A4K0M9   A0A2A4JIA9   A0A2A4ISJ1   A0A2W1BKL8   A0A3S2N3S1   A0A0L7LN09   A0A0L7LT08   A0A1S3DR71   A0A2A4IZX0  

KEGG

NA   

GO

GO:0016021   GO:0007165  

PANTHER

PTHR11505  

Length:

245

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00690999999999999

Exp number, first 60 AAs:

0.00183

Total prob of N-in:

0.02409

outside

1  -  245

 

 

Pi

222.705912

Theta

146.141454

Tajima's D

1.749062

CLR

0

CSRT

0.84040797960102

Interpretation

Uncertain