SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08013
Pre Gene Modal
BGIBMGA001135
Annotation
PREDICTED:_uncharacterized_protein_LOC101741917_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.358
 

Sequence

CDS
ATGGATCGTCGACTAATTGCTCTTTTGGCGGTGGCCGCCCATTTAAGTTGTATGACACCAGTACGAGCACAAGGAAATCTCCTCACTCAGACTGTCTATGGATTCTTGGACTTCACGACAACCATTGGCAATACCGTAATGGTGTTCTCGCCCCAGTCAGCGCCTCCTCCAGAACCGCCCAAAACTGAAAAGTCAGTTCAAGAAAATATCATCGAAACGAAACCTCCACCGCCATCAGTTACAAATGTCAACCCGGAAGCCATCAAACCTAGTAAACTGTCAGACAAAAACAAAACCAATAAGCCGGCTCCACCAGCTGTTGTGTCAAGTGCAGTAAACGTGGTCTCTTCATCTCCTAAAAAAGAGGAAAAGAAAGGAAACACTCCAAAGTCAACAATTAAAGAACAAAGCCAAGTCATCACAAAAGTCGAAGTAGTAGCAGGACCTTCAAAAATAGTAGAAAGTAGTTCACCAAAACAAAAATCAAATAAACAGAACTCTCAATCTAGTAACAAGAATAAAAAGAACGAAATTAAGAGCGTTACAAACATCGTGAGCAGTAAAGTTGAAGTAAAACAAGGCACGCCACCGTCGATAATAAGCTCCAAAATCAATAGCGTTGTTCAAGTTAAATCGAGTCAGTCTGACGAAGAACCAGCTATATTAATCTCGAACAATAATTTAGGCGAACCGGAATACGATTTCTTGTCGCGACAACCCTCTGAATTTGTTGAAGAAACATACAAAGTAATTAACATCAGACCCTCTAAAACTCATGGATCGAAGCCAAAGCACGCTCATAAGAATAGAGCCCACCAGCCTAGCCCTCCTTCGGATGATGACGAACACCCTCTCGGCCTTGTAACTACTTTAGGCGGTACCATCGTCAAAGATGGACTTACAACGATCCATGAAACAAGTGTCATAGGAACATACATTTCTGGAAAATATGCACAAGTTTTAAACAGTAACTCTAAAATTATACAACCGGCTGGTCATAGAGCCAAAATATCTCCCTCTCCCACACACAGAATTCTTAAAACAGCCGCACCGGCTATTTCTAAAAATCACAGACACAACTTGGAACCAACTCCCTCTATTTCTGATGACGATAGTAGCTTTGGTAAAACCTCACGCAGACAAACAATAAGTGGCAGCTCATTTAAAAATCGACACCGATCCCAAAACTTTGCTGAAAACGATAATCACGACAACAGTCCTGCTAATCAAAGCAAAAAATTCAAAAACCGAAATGCCCAGAGGACTCCCAGTGAAACAGCGACACCGTCATTCTCTAATAGAAGAAAGAGCAGTCGAAATTCAGGTCACAAATCCGTGGTGACTCCCGCCAACAACAACGAGAATCAGTCTCGGCGAGGATTCAAACCTCGAGCTCAGCCATCTCCAGTCGAACAAGTGACTCCAGCACCGTCAACAAGTCTTTATAAATTTAAATTGAACCGAACTCCGGGTTCGGGACGATGGCAGTACAAAACTAGTCCTAAACCGAAAGTAACCATCCGTAAGGCCGTAAGTGAGGAGGAGCTGCAACAAACGACCCCTAATACCAACCCTCTTCTGGATGATACGCAATTAAACGATATTTCTCCTCAAGCAAGATCAGATAACGATCTTGAGCTCTCTGGATCTCAAAGTGGTCCAGGCACGCTACTTGACAATGACACTGAGGACAATTCAATTGAAAAACTGCCACCAGTTGAAACACTAAAAGTCGAAATTTCCACACCTGCCGACTTCAGTGACGTGTATTACGAAATTGCAACAATTAAATCGCCCTATACTTTCCAGGTTGGACGTGTTAAAAATACTCGTGTTATAACAGTAACCTCAACAATAGAAAAACGTTTAGAACCAACAGTAGCTCCATCGCAAATTTCTCTCAACGAGCCGTTGACAGAAAACATATTGGCGACCGCATCTCCCTATGGCAAAGATCACAATTTAGATTCAAGCATCGCTACTCTACCAGCTATAACGCTGCCTTCTGACATGGAAACCCCGCCACTTGAAACTATTACTGAAACATTCAGTACAACACAGAACATGCTTAAAACTCACATTCTGCCCGTAGTAAGAGACGTCAACATGACAAGTAGCTTGACTTTTATTCAAACATACCAAATCACAAGATTCGTTACGGCAACGAAGACTTTACCACCAATGGACTACTTCCAATTTATACCCAGCAAAACATTAAAGGAATTCAACAGCCGACTGGACGAAGCAGGTTCAGAATTACATTTGGAACTAGATTTTGGAGATAGCACCGAAGACGAAGACGGTGTTCCTCGACGAGTCTTCCCACCAGAATTGGATCTCGCTAATATTGGCTCTGATTTTGATTTAACCGAAATCGACAAATACGGAGCAGACAACCATTTAAGGCTCAAAAAAGCACACGGACAAAACAAAGCAAACCATGTAACGGAAGCGCCAAACGTGCCGACTCCTGCTTTAACTCCCGAACAAGCGCAACAATTGGCTCTGCTTAGACTCCTCAATCCAGCCGCTGCAGCTCAAATACCTAACGTCGTTACGACTTCGAAACCTATTTTCAAATACGAAACTATTTATGAATCGCATGTCATTCCATTCTTCGACGGAAGAAATACAGTGCAAAGCACCATTTCACGACCCATTGCAACTGTCACGAAAACAGAGTACGAAATAGGAACGAGTAGTTTGCCTGCTTTGCCTCTGCAGCCGATCAATCCTTTGTTCCCTCAACAACAGTTTACTCTAATTTCGACACCGGTCGTCATGAACACCGAAGTAATAGCAACTGATAGTCAAATTCTAAAATTAACTTTCGGTGCGAAAACCGTGTACACGACATTGTTCACGACCAAAGTCGTACCGACCGTGCTTACTTCCTACGTAACCTCATCGATACCTGTACAAGCCTCGGCGGGCTACCCGGGATATTTCCCGCCACCCTTCGCACCTTACCCATATGTAGGTTAA
Protein
MDRRLIALLAVAAHLSCMTPVRAQGNLLTQTVYGFLDFTTTIGNTVMVFSPQSAPPPEPPKTEKSVQENIIETKPPPPSVTNVNPEAIKPSKLSDKNKTNKPAPPAVVSSAVNVVSSSPKKEEKKGNTPKSTIKEQSQVITKVEVVAGPSKIVESSSPKQKSNKQNSQSSNKNKKNEIKSVTNIVSSKVEVKQGTPPSIISSKINSVVQVKSSQSDEEPAILISNNNLGEPEYDFLSRQPSEFVEETYKVINIRPSKTHGSKPKHAHKNRAHQPSPPSDDDEHPLGLVTTLGGTIVKDGLTTIHETSVIGTYISGKYAQVLNSNSKIIQPAGHRAKISPSPTHRILKTAAPAISKNHRHNLEPTPSISDDDSSFGKTSRRQTISGSSFKNRHRSQNFAENDNHDNSPANQSKKFKNRNAQRTPSETATPSFSNRRKSSRNSGHKSVVTPANNNENQSRRGFKPRAQPSPVEQVTPAPSTSLYKFKLNRTPGSGRWQYKTSPKPKVTIRKAVSEEELQQTTPNTNPLLDDTQLNDISPQARSDNDLELSGSQSGPGTLLDNDTEDNSIEKLPPVETLKVEISTPADFSDVYYEIATIKSPYTFQVGRVKNTRVITVTSTIEKRLEPTVAPSQISLNEPLTENILATASPYGKDHNLDSSIATLPAITLPSDMETPPLETITETFSTTQNMLKTHILPVVRDVNMTSSLTFIQTYQITRFVTATKTLPPMDYFQFIPSKTLKEFNSRLDEAGSELHLELDFGDSTEDEDGVPRRVFPPELDLANIGSDFDLTEIDKYGADNHLRLKKAHGQNKANHVTEAPNVPTPALTPEQAQQLALLRLLNPAAAAQIPNVVTTSKPIFKYETIYESHVIPFFDGRNTVQSTISRPIATVTKTEYEIGTSSLPALPLQPINPLFPQQQFTLISTPVVMNTEVIATDSQILKLTFGAKTVYTTLFTTKVVPTVLTSYVTSSIPVQASAGYPGYFPPPFAPYPYVG

Summary

EMBL
BABH01000544    NWSH01003977    PCG65603.1    RSAL01000074    RVE48963.1    ODYU01000577    + More
SOQ35582.1    KQ460761    KPJ12510.1    KQ459439    KPJ00962.1    AGBW02004200    OWR55469.1    JTDY01004585    KOB67984.1    LJIG01009021    KRT83913.1    KQ971338    EFA01825.2    GEZM01042462    JAV79838.1    CVRI01000064    CRL04972.1    UFQT01000227    SSX22064.1    APGK01015567    APGK01015568    APGK01015569    APGK01015570    APGK01015571    KB739617    ENN82196.1    APGK01013830    APGK01013831    APGK01013832    APGK01013833    APGK01013834    KB739123    ENN82372.1    APCN01005560    APCN01005561    APCN01005562    ATLV01023909    KE525347    KFB49872.1    AXCN02001046    ADMH02000480    ETN66323.1    AXCM01003445    AXCM01003446    LBMM01000509    KMQ98184.1    ADTU01013611    KQ979999    KYN18307.1    KQ977381    KYN03172.1    GL888292    EGI63042.1    KQ976736    KYM76120.1    KQ981490    KYN41279.1    CH477204    EAT47977.1    GL435707    EFN72823.1    GL761997    EFZ22500.1    GL446149    EFN88435.1    KQ982080    KYQ60243.1    KQ434996    KZC13232.1    KK107260    QOIP01000001    EZA54003.1    RLU27363.1    GBYB01006753    JAG76520.1    KQ435827    KOX71946.1    AAAB01008933    EAL40359.3    KQ414693    KOC63568.1    ABLF02014897    ABLF02020278    ABLF02032583    ABLF02032584    ABLF02032586    ABLF02032587    ABLF02032589    ABLF02032591    ABLF02046780    ABLF02061610    GGMS01012631    MBY81834.1    KZ288379    PBC26558.1    KK854100    PTY11274.1    CH963849    EDW74444.1    ACPB03002863    CH916367    EDW01939.1    CM002911    KMY96256.1    CH480820    EDW53927.1    CH954179    EDV56951.1    AE013599    BT001664    AAF47161.1    AAN71419.1    KQS63101.1    CM000158    EDW92481.1    KRK00544.1    CH940659    KRF85676.1    KRF85674.1    KRF85675.1    CH933808    EDW09795.2    KRG04904.1    KRG04905.1    CM000071    EAL25473.3    KRT02246.1    KRT02247.1   
Pfam
PF15950   DUF4758
Interpro
IPR031866   DUF4758       

Ontologies

GO

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.974332
 
 
Length:
994
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.90828
Exp number, first 60 AAs:
0.84216
Total prob of N-in:
0.04132
outside
1  -  994
 
 

Population Genetic Test Statistics

Pi
300.704882
Theta
215.992353
Tajima's D
1.250463
CLR
0
CSRT
0.728063596820159
Interpretation
Uncertain
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