SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07998
Pre Gene Modal
BGIBMGA001012
Annotation
PREDICTED:_testis-specific_serine/threonine-protein_kinase_1-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.724
 

Sequence

CDS
ATGGAGTCTAAAGCGAAGTATCATCATATTGAAGAAGAATTAAAATTGACCTGCTCAGAACAATTGACTCTTGCTTCAAGAGGTTACAAAATCATCAAAAAAGTCAATGAAGGATCTTATGCAAAGGTATACTTAGCGGAGTACAGAAATGCCAGTAAAAACGATAAGCTCTCTATATTGGCTTGTAAAGTAATCGACACCAGTACTGCACCAAGAGATTTTGTGAAAAAGTTTCTACCGAGAGAGATAGAGATGTTAATAAAACTAAGTCACCCACATTTAGTTCACACTCACAGCATCTTCCAAAGGAGGTACAAGTATTTCATATTCATGCGTTACATGGAGCGCGGGGACTTGTTGGAGTTTGTTTTGCAGAGAGGCGCTGTGCAAGAAGACCAGGCTAGGATATGGACGCGGCAACTCGCCCTAGCGATTCAGTATATGCACGAACTCGAAATAGCTCACAGGGACATAAAGTGCGAGAACGTTCTACTGACGGCCAATCAGAATGTGAAATTATCCGATTTTGGTTTCGCTCGAATGTGTGTCGATAAGAAATTAAATGAAATACGCAGTGAAACTTTCTGCGGTTCCTTATCGTACACAGCACCCGAGATATTACAGGGGACGCCGTATTTACCGAAACCGACCGACGTTTGGTCTCTGGGAATAGTCGTTTATGTTATGTTAAACAGAGCGATGCCTTTCGAAGACAAACACATCAAGCAACTGCACCAGGCACAGATTAATAAGAACTGGAAGTTTAGATCACGCTATATCGACACCATCTCCGATAATTGTAAACGGCTGATTGGACTTATGTTAGAACCGAATCATCAGAATCGTCTCAAAATATACGATATAGTTAATAGCGAATGGATCGCGATGGATTCCCGTTTATTAGAGTGGACTCCGCAAGAAACTTTGGCGTATAAGAAAGCACGTGAGGAGAAAAATAAGTTACATAAAACTGTGGAAACTGTTGAATTACCAGGATCCAGCAAGACAGAGCACAAAGTTTGTTTACCAGACTCTCTTGTAGAAAATAATTTAGACGGTGCAGCTTCGACGTCTTCTTATGTACGATAA
Protein
MESKAKYHHIEEELKLTCSEQLTLASRGYKIIKKVNEGSYAKVYLAEYRNASKNDKLSILACKVIDTSTAPRDFVKKFLPREIEMLIKLSHPHLVHTHSIFQRRYKYFIFMRYMERGDLLEFVLQRGAVQEDQARIWTRQLALAIQYMHELEIAHRDIKCENVLLTANQNVKLSDFGFARMCVDKKLNEIRSETFCGSLSYTAPEILQGTPYLPKPTDVWSLGIVVYVMLNRAMPFEDKHIKQLHQAQINKNWKFRSRYIDTISDNCKRLIGLMLEPNHQNRLKIYDIVNSEWIAMDSRLLEWTPQETLAYKKAREEKNKLHKTVETVELPGSSKTEHKVCLPDSLVENNLDGAASTSSYVR

Summary

Similarity
Belongs to the protein kinase superfamily.
EMBL
BABH01000557    NWSH01003604    PCG66066.1    KQ459299    KPJ01854.1    ODYU01000577    + More
SOQ35598.1    KQ460761    KPJ12526.1    AGBW02004200    OWR55453.1    KZ288439    PBC25730.1    AAZO01005497    DS235786    EEB17054.1    KQ764887    OAD54258.1    GBYB01015269    JAG85036.1    KQ435826    KOX71989.1    KK107372    QOIP01000004    EZA51705.1    RLU23740.1    GL434492    EFN74843.1    KQ977059    KYN06039.1    KQ980581    KYN15282.1    GL888932    EGI57207.1    KQ982373    KYQ56993.1    KQ434857    KZC08871.1    GL762841    EFZ20670.1    LBMM01004298    KMQ92593.1    ADTU01011290    KQ971338    KYB28052.1    KQ976500    KYM83202.1    UFQT01000658    SSX26220.1    UFQS01000871    UFQT01000871    SSX07413.1    SSX27755.1    JTDY01004102    KOB68598.1    APGK01023097    KB740463    ENN80600.1    OWR55454.1    PCG66067.1    SOQ35597.1    EEB17053.1    KPJ01853.1    KPJ12523.1    PYGN01000730    PSN41587.1    KQ971351    EFA06542.1    JTDY01007073    KOB65475.1    BABH01029921    KQ434809    KZC06254.1    GECZ01019434    JAS50335.1    KQ414667    KOC64664.1    NWSH01000091    PCG79688.1    APGK01057807    KB741282    KB631802    ENN70804.1    ERL86256.1    KK107119    EZA58692.1    KQ435848    KOX71079.1    PYGN01002835    PSN29911.1    KZ288194    PBC33869.1    GL450687    EFN80645.1    KQ980734    KYN13801.1    ADTU01009973    KQ459604    KPI92309.1    KQ460045    KPJ18182.1    AGBW02013634    OWR43061.1    JTDY01000506    KOB76862.1    GECU01015517    JAS92189.1    ODYU01009039    SOQ53153.1    LJIJ01000133    ODN01930.1    GL888529    EGI59738.1    GEBQ01002223    JAT37754.1    GFTR01005875    JAW10551.1    AAZO01003886    DS235339    EEB14914.1    GBHO01030567    JAG13037.1    GEZM01046475    GEZM01046474    GEZM01046473    JAV77211.1    JN159476    AET21260.1    APCN01006578    AAAB01008849    GL766762    EFZ14632.1    KQ982686    KYQ52330.1    UFQS01001902    UFQT01001902    SSX12670.1    SSX32113.1    CH916369    EDV93282.1    GBYB01004932    JAG74699.1    JXJN01028586    CCAG010005923    ACPB03021246    ACPB03021247    AXCN02002276    GDHF01015863    JAI36451.1    GBXI01009580    JAD04712.1    MF101664    GAKP01004866    AVQ54902.1    JAC54086.1    QOIP01000009    RLU18435.1    GAMC01012362    JAB94193.1   
Pfam
PF00069   Pkinase        + More
PF10394   Hat1_N
PF13656   RNA_pol_L_2
Interpro
IPR000719   Prot_kinase_dom        + More
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR016181   Acyl_CoA_acyltransferase       
IPR013523   Hist_AcTrfase_HAT1_C       
IPR037113   Hat1_N_sf       
IPR019467   Hat1_N       
IPR033898   RNAP_AC19       
IPR036603   RBP11-like       
IPR008193   RNA_pol_Rpb11_13-16kDa_CS       
IPR009025   RBP11-like_dimer       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
SUPFAM
SSF56112   SSF56112        + More
SSF55729   SSF55729       
SSF55257   SSF55257       
Gene 3D

Ontologies

Topology

Length:
362
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05978
Exp number, first 60 AAs:
0.00011
Total prob of N-in:
0.04233
outside
1  -  362
 
 

Population Genetic Test Statistics

Pi
184.309257
Theta
226.244068
Tajima's D
-1.087555
CLR
553.358788
CSRT
0.125043747812609
Interpretation
Uncertain
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