Gene

KWMTBOMO07993

Annotation

PREDICTED:_transmembrane_protein_41_homolog_[Papilio_machaon]

Location

Bomo_Chr13(-):12061325-12064393      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.939

CDS

ATGGAAACAAAAAGTGAGAAAACATCTAGTTCAAATTTATCAACTTCTACAGCTTTAGTATTAGTTGTATTTATATTTTTATCTTCACTATTAGCACTAGCACTTCTATACAGGCAATTCCCAGAGTTAGAAGAACATGAGCGACAGCATTTACATTTACCATGGGACTTAGAGGATGCTAAACAGTTGGGTCTTGTACTGGATAGATACAAAGACAGATATTTTTATGAAGTATTATTTGGAGTATTTTTAGTTTATATATTTTTGCAAACATTTGCAATACCTGGATCTATATTTTTAAGTATACTTTCAGGGTTTCTTTTTCCTTTTTATTTCGCACTGGTATTAGTTTGTTGCTGTTCGGCAATTGGTGCAAGTCTATGTTTCTTCTTGTCAAATCTTCTTGGAAAGAAGCTTGTTAGAAAATTCTTCCCAGAAAGAGCAGCAGAGTGGTCAAAGGCAGTGGCAAAACACAAGGACAATTTGCTCAATTATATTGTCTTTTTAAGAGTCACACCTTTTTTGCCTAACTGGTTTATAAATATGTCTGCTCCAGTGATTGGGGTGCCTTTGGTGCCGTTTGCATTAGGAACATTTATTGGTGTGGCTCCACCATCATTTGTAGCAATTCAAGCAGGACAAACCTTACATACTCTGACATCTACAAGTGATGCTTGGTCATGGACATCTATAACAGTACTCAGCGTTTTTGCACTAGTTTCCTTGATTCCAGTATTCTTAAAAGACAAACTTCGAGAAAAGTTTGACTAA

Protein

METKSEKTSSSNLSTSTALVLVVFIFLSSLLALALLYRQFPELEEHERQHLHLPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTPFLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAGQTLHTLTSTSDAWSWTSITVLSVFALVSLIPVFLKDKLREKFD

Uniprot

A0A2A4J679   S4PF86   A0A2H1V5E0   A0A212FP14   A0A194R5L6   I4DLJ9   + More
A0A194Q8K6   A0A1Y1MEX2   A0A1B0DJS9   A0A1L8DUT9   A0A1L8DUU6   A0A1L8DUS2   A0A1L8DV83   K7IYV1   A0A087UBU8   A0A0L7R769   A0A0V0GC97   A0A224XV22   J3JUB4   A0A023F3D6   A0A1D2NAF1   T1HB98   A0A0P4VJS3   K1R060   A0A182W469   A0A2J7Q552   A0A182P6U3   A0A182RH84   A0A1Q3FAX3   A0A182TTJ1   A0A182I9J6   A0A182LW71   A0A182LR82   A0A1Q3FAA6   A0A182UUD4   Q7QE92   A0A182N0G8   A0A182XEK6   A0A182JYM6   B0X894   A0A1Q3FAG3   A0A1Q3FA30   A0A182Y563   A0A0K8TS77   V4ANR8   A0A1Q3F9V7   E9FWW7   A0A084VV67   A0A182SXC3   Q16G02   A0A182JCQ6   A0A158P221   Q16V42   E2ACS3   A0A151WHS7   F4W6A5   A0A1B0CR24   A0A1E1XC47   A0A224ZB34   A0A131YP06   A0A023FGI3   L7M4B8   A0A0P5HJD6   A0A195AVQ6   A0A0P6E1D4   A0A2T7PIE3   A0A0L8FZ50   A0A131XLF8   A0A0N0BC39   A0A2M4AA64   A0A2M4BV15   A0A2M4A9V3   A0A0N8DQC7   A0A2M4A9R0   W5JKC3   N6UW72   A0A210QW76   A0A2M4BTL1   A0A2M4BTH7   A0A182FMF7   A0A182G4Q4   A0A1S3GY25   A0A026VU49   R7T3Y5   A0A023EQW7   A0A3L8DAX4   A0A154PC62   A0A195FJH3   A0A023ES35   A0A067R4D2   A0A2M3ZFJ3   A0A2M3YYZ4   A0A1S3GZJ5   U4UIH0   A0A1D1VSK8   A0A023GBM0   A0A293LAT7   A0A1Z5L5I2   A0A226E7B9  

Pubmed

23622113    22118469    26354079    22651552    28004739    20075255    + More
22516182    25474469    27289101    27129103    22992520    20966253    12364791    14747013    17210077    25244985    26369729    23254933    21292972    24438588    17510324    21347285    20798317    21719571    28503490    28797301    26830274    25576852    28049606    20920257    23761445    23537049    28812685    26483478    24508170    24945155    30249741    24845553    27649274    28528879   

EMBL

NWSH01003112    PCG66922.1    GAIX01004152    JAA88408.1    ODYU01000577    SOQ35602.1    + More
AGBW02004200    OWR55449.1    KQ460761    KPJ12530.1    AK402167    BAM18789.1    KQ459299    KPJ01858.1    GEZM01035686    JAV83130.1    AJVK01001049    GFDF01003884    JAV10200.1    GFDF01003885    JAV10199.1    GFDF01003890    JAV10194.1    GFDF01003889    JAV10195.1    KK119126    KFM74837.1    KQ414642    KOC66720.1    GECL01000442    JAP05682.1    GFTR01004166    JAW12260.1    BT126827    AEE61789.1    GBBI01002909    JAC15803.1    LJIJ01000119    ODN02239.1    ACPB03010575    GDKW01003922    JAI52673.1    JH816690    EKC27046.1    NEVH01018372    PNF23715.1    GFDL01010397    JAV24648.1    APCN01000987    AXCM01001219    GFDL01010607    JAV24438.1    AAAB01008847    EAA06878.4    EGK96598.1    DS232478    EDS42363.1    GFDL01010562    JAV24483.1    GFDL01010614    JAV24431.1    GDAI01000394    JAI17209.1    KB201656    ESO95286.1    GFDL01010690    JAV24355.1    GL732526    EFX87967.1    ATLV01017157    KE525157    KFB41861.1    CH478353    EAT33167.1    ADTU01006966    CH477605    EAT38386.1    GL438568    EFN68817.1    KQ983112    KYQ47355.1    GL887707    EGI70240.1    AJWK01024355    AJWK01024356    GFAC01002532    JAT96656.1    GFPF01012806    MAA23952.1    GEDV01007544    JAP81013.1    GBBK01004644    JAC19838.1    GACK01007090    JAA57944.1    GDIQ01227167    JAK24558.1    KQ976731    KYM76261.1    GDIP01046122    GDIQ01069623    JAM57593.1    JAN25114.1    PZQS01000003    PVD33195.1    KQ425163    KOF69864.1    GEFH01001613    JAP66968.1    KQ435951    KOX68114.1    GGFK01004187    MBW37508.1    GGFJ01007789    MBW56930.1    GGFK01004189    MBW37510.1    GDIP01011231    JAM92484.1    GGFK01004188    MBW37509.1    ADMH02001263    ETN63335.1    APGK01006428    APGK01006429    KB736762    ENN83137.1    NEDP02001544    OWF53018.1    GGFJ01007279    MBW56420.1    GGFJ01007255    MBW56396.1    JXUM01144246    KQ569748    KXJ68525.1    KK107906    EZA47257.1    AMQN01015889    KB312327    ELT87421.1    GAPW01002085    JAC11513.1    QOIP01000010    RLU17655.1    KQ434869    KZC09377.1    KQ981523    KYN40412.1    GAPW01002057    JAC11541.1    KK852760    KDR17032.1    GGFM01006528    MBW27279.1    GGFM01000725    MBW21476.1    KB632374    ERL93804.1    BDGG01000007    GAV01944.1    GBBM01004121    JAC31297.1    GFWV01001012    GFWV01013374    MAA25742.1    GFJQ02005489    GFJQ02004338    JAW01481.1    JAW02632.1    LNIX01000006    OXA53230.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000092462    UP000002358    + More
UP000054359    UP000053825    UP000094527    UP000015103    UP000005408    UP000075920    UP000235965    UP000075885    UP000075900    UP000075902    UP000075840    UP000075883    UP000075882    UP000075903    UP000007062    UP000075884    UP000076407    UP000075881    UP000002320    UP000076408    UP000030746    UP000000305    UP000030765    UP000075901    UP000008820    UP000075880    UP000005205    UP000000311    UP000075809    UP000007755    UP000092461    UP000078540    UP000245119    UP000053454    UP000053105    UP000000673    UP000019118    UP000242188    UP000069272    UP000069940    UP000249989    UP000085678    UP000053097    UP000014760    UP000279307    UP000076502    UP000078541    UP000027135    UP000030742    UP000186922    UP000198287   

Pfam

PF09335   SNARE_assoc

Interpro

IPR032816   SNARE_assoc        + More
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

A0A2A4J679   S4PF86   A0A2H1V5E0   A0A212FP14   A0A194R5L6   I4DLJ9   + More
A0A194Q8K6   A0A1Y1MEX2   A0A1B0DJS9   A0A1L8DUT9   A0A1L8DUU6   A0A1L8DUS2   A0A1L8DV83   K7IYV1   A0A087UBU8   A0A0L7R769   A0A0V0GC97   A0A224XV22   J3JUB4   A0A023F3D6   A0A1D2NAF1   T1HB98   A0A0P4VJS3   K1R060   A0A182W469   A0A2J7Q552   A0A182P6U3   A0A182RH84   A0A1Q3FAX3   A0A182TTJ1   A0A182I9J6   A0A182LW71   A0A182LR82   A0A1Q3FAA6   A0A182UUD4   Q7QE92   A0A182N0G8   A0A182XEK6   A0A182JYM6   B0X894   A0A1Q3FAG3   A0A1Q3FA30   A0A182Y563   A0A0K8TS77   V4ANR8   A0A1Q3F9V7   E9FWW7   A0A084VV67   A0A182SXC3   Q16G02   A0A182JCQ6   A0A158P221   Q16V42   E2ACS3   A0A151WHS7   F4W6A5   A0A1B0CR24   A0A1E1XC47   A0A224ZB34   A0A131YP06   A0A023FGI3   L7M4B8   A0A0P5HJD6   A0A195AVQ6   A0A0P6E1D4   A0A2T7PIE3   A0A0L8FZ50   A0A131XLF8   A0A0N0BC39   A0A2M4AA64   A0A2M4BV15   A0A2M4A9V3   A0A0N8DQC7   A0A2M4A9R0   W5JKC3   N6UW72   A0A210QW76   A0A2M4BTL1   A0A2M4BTH7   A0A182FMF7   A0A182G4Q4   A0A1S3GY25   A0A026VU49   R7T3Y5   A0A023EQW7   A0A3L8DAX4   A0A154PC62   A0A195FJH3   A0A023ES35   A0A067R4D2   A0A2M3ZFJ3   A0A2M3YYZ4   A0A1S3GZJ5   U4UIH0   A0A1D1VSK8   A0A023GBM0   A0A293LAT7   A0A1Z5L5I2   A0A226E7B9  

KEGG

101742106    no KO assigned | (RefSeq) uncharacterized LOC101742106

GO

GO:0016021  

Length:

256

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

116.78011

Exp number, first 60 AAs:

22.73235

Total prob of N-in:

0.00516

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  37

inside

38  -  77

TMhelix

78  -  100

outside

101  -  109

TMhelix

110  -  132

inside

133  -  187

TMhelix

188  -  210

outside

211  -  224

TMhelix

225  -  247

inside

248  -  256

 

 

Pi

202.463996

Theta

197.687921

Tajima's D

0.076043

CLR

0.003835

CSRT

0.389830508474576

Interpretation

Uncertain