Gene

KWMTBOMO07992

Annotation

PREDICTED:_uncharacterized_protein_LOC106131122_[Amyelois_transitella]

Location

Bomo_Chr13(+):12059064-12061311      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.471

CDS

ATGGTCAATCAGGAAGTACTTCGAGACTACTCAAGTTCAATCAAAAACTTAAAAAGGGAAGCCGCTAACGCTGGTATTAGTGAAGAAGATTTCAAGAAATTGTATTTTGAATCTCTCAAAACACTAGAAAAAAGTGAACGTCCCAGTTCATTGACAATTGTTAGAAACAATAAACTTAAAATAATTAGCGTACTACTTTTGGTATTTGCTTTATTCAACTTCAAATATGTGTATAGCAGTTTTGTGTGCAACTTACAAGAATACATATATCCAGGACTAAGGTTACTGAGAAAGATCTCAATACCATTTATTTCTTTGTTCCCTGCTTTATCAGAATACTACTATGAAACTTGTTTAGTACAAAACCCATTCTTCACTGTTGTCGATATGGATTGTTGGCCATGTAGTTCTATCACTAATATTCAAGAGATCTTTGATCCAAAACCAGTCACTAATCAGCACATTGCTCCATTTGTTTACCAGACTAGTCAAGAAAGAATTTCAATAAGTCTGCTTAAAAGTCTCTATGAAAAAAATAAAGATATTTTTGCTAATGCATCTCCAAAGATTTTATTAAATAACAAGTTCTATATACAACCAGAAGATATGTTTGATCTACATGCAAAAGGGGAAAAAAATATTTATGTGTGGAAATTCAATCGGATGAATGAAGCAAAAGTGTTACGACAACTTATACCCCGACCGACAGTAGTACCAAAATTTGGACAGAGCATAGAGAGATATTTAATAATACATACTAATCAAGACTCATATAAATTACCAGATACTGAATGTAATTTCTCATTCGTACTATCATTGAGTGGTGCAAGGACACTCTATTTAATACCAGCTGAAGAATGCAAACATCAATGCAGGCATTTGTCAATTGATTTAAAAGAAGGTTATTTACTATGGTACAATTGGTGGTACTGGAGACCAAAAATACAACCTACAGTTGACAATACTACTTTCATTGGCCATATAGGCTCATATTGCTAA

Protein

MVNQEVLRDYSSSIKNLKREAANAGISEEDFKKLYFESLKTLEKSERPSSLTIVRNNKLKIISVLLLVFALFNFKYVYSSFVCNLQEYIYPGLRLLRKISIPFISLFPALSEYYYETCLVQNPFFTVVDMDCWPCSSITNIQEIFDPKPVTNQHIAPFVYQTSQERISISLLKSLYEKNKDIFANASPKILLNNKFYIQPEDMFDLHAKGEKNIYVWKFNRMNEAKVLRQLIPRPTVVPKFGQSIERYLIIHTNQDSYKLPDTECNFSFVLSLSGARTLYLIPAEECKHQCRHLSIDLKEGYLLWYNWWYWRPKIQPTVDNTTFIGHIGSYC

Uniprot

A0A2A4J4K0   A0A2H1V440   A0A212FNX6   A0A194R9J4   A0A0L7LC29   A0A1Q3F904   + More
W5JTL5   B0X896   A0A182N9A7   A0A182RJL0   A0A0P6JSP8   A0A1S4FNA9   A0A182WBI3   A0A182JRN7   A0A2M4CNF8   A0A182WWI1   A0A182L3N6   A0A182I6R1   A0A182TZD4   A0A182FEM3   A0A1Y1MH36   A0A139WIX5   A0A182Q8N8   A0A182IQX4   A0A182LTG1   A0A182VAG1   A0A0C9R5D3   A0A0C9RJU9   A0A084W142   A0A1W4XRP4   A0A154PDQ1   A0A026VTY1   A0A1L8DA30   A0A0L7R7A2   E2ACS2   E9J8M0   A0A0K8TKR0   A0A151IES1   Q16V43   A0A182PIJ2   F4W6A4   A0A195FJ32   Q7QIL4   A0A1B6FVE1   A0A232EZW6   A0A2A3E237   U4TUN5   A0A1B6K505   A0A195AW28   E0VCC6   A0A151WHP1   A0A158P220   A0A088A2R4   A0A0M8ZRF4   N6UJH6   A0A195DMM2   A0A1B6MGP5   B4PZ93   B3NXX1   A0A1B6H8I9   B4NEP8   A0A0A9ZFG2   D3TPC9   A0A1B0ABV9   A0A1W4V9R3   A0A1A9UHM6   A0A3B0JWR5   A0A1A9W1W6   A0A1A9XIB8   A0A1B0ARV5   B3MS62   B4JND0   E1JJF2   A0A1B6CT62   A0A1B6CW23   Q29JM5   A0A0K8W4K8   A0A034W9P2   A0A182Y2B6   A0A0A1WLH7   W8AJM0   A0A2J7Q502   T1IB28   A0A1I8NC67   A0A1I8Q8X2   A0A0M3QZA8   B4M7J5   E2BCT9   A0A146LTY3   A0A336ME62   B4L1D2   A0A2M4AY05   A0A2R7VNB8   Q9W3V0   A0A0T6B2F1   A0A2P8XAH9  

Pubmed

22118469    26354079    26227816    20920257    23761445    26999592    + More
17510324    20966253    28004739    18362917    19820115    24438588    24508170    30249741    20798317    21282665    26369729    21719571    12364791    28648823    23537049    20566863    21347285    17994087    17550304    25401762    26823975    20353571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    25348373    25244985    25830018    24495485    25315136    26109357    26109356    29403074   

EMBL

NWSH01003112    PCG66921.1    ODYU01000577    SOQ35603.1    AGBW02004200    OWR55448.1    + More
KQ460761    KPJ12531.1    JTDY01001767    KOB72945.1    GFDL01011067    JAV23978.1    ADMH02000413    ETN66623.1    DS232478    EDS42365.1    GDUN01000184    JAN95735.1    GGFL01002678    MBW66856.1    APCN01003693    GEZM01033279    JAV84288.1    KQ971338    KYB27968.1    AXCN02000558    AXCM01000934    GBYB01007987    JAG77754.1    GBYB01013557    GBYB01013558    JAG83324.1    JAG83325.1    ATLV01019208    KE525264    KFB43936.1    KQ434869    KZC09378.1    KK107906    QOIP01000010    EZA47258.1    RLU17654.1    GFDF01010894    JAV03190.1    KQ414642    KOC66719.1    GL438568    EFN68816.1    GL769036    EFZ10812.1    GDAI01002887    JAI14716.1    KQ977858    KYM99313.1    CH477605    EAT38385.1    GL887707    EGI70239.1    KQ981523    KYN40413.1    AAAB01008807    EAA04358.3    GECZ01024567    GECZ01015766    JAS45202.1    JAS54003.1    NNAY01001413    OXU24056.1    KZ288449    PBC25594.1    KB631581    ERL84482.1    GECU01001175    JAT06532.1    KQ976731    KYM76262.1    DS235053    EEB11032.1    KQ983112    KYQ47356.1    ADTU01006966    KQ435951    KOX68113.1    APGK01031920    KB740831    ENN78817.1    KQ980724    KYN14082.1    GEBQ01004926    JAT35051.1    CM000162    EDX01060.1    CH954180    EDV47422.1    GECU01036773    JAS70933.1    CH964239    EDW82217.1    GBHO01022996    GBHO01022995    GBHO01022991    GBHO01022990    GBHO01001436    GBHO01001418    GDHC01015722    JAG20608.1    JAG20609.1    JAG20613.1    JAG20614.1    JAG42168.1    JAG42186.1    JAQ02907.1    CCAG010021577    EZ423281    ADD19557.1    OUUW01000003    SPP77796.1    JXJN01002588    CH902622    EDV34617.1    CH916371    EDV92223.1    AE014298    ACZ95219.1    GEDC01020592    JAS16706.1    GEDC01019592    JAS17706.1    CH379063    EAL32276.2    GDHF01033302    GDHF01006278    JAI19012.1    JAI46036.1    GAKP01007920    JAC51032.1    GBXI01014585    JAC99706.1    GAMC01021657    JAB84898.1    NEVH01018372    PNF23654.1    ACPB03005357    CP012528    ALC49049.1    CH940653    EDW62762.2    GL447388    EFN86491.1    GDHC01007920    JAQ10709.1    UFQT01000707    SSX26677.1    CH933810    EDW06653.1    GGFK01012271    MBW45592.1    KK854004    PTY09052.1    AY061462    AAF46213.2    AAL29010.1    LJIG01016162    KRT81428.1    PYGN01015190    PSN29002.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000037510    UP000000673    UP000002320    + More
UP000075884    UP000075900    UP000075920    UP000075881    UP000076407    UP000075882    UP000075840    UP000075902    UP000069272    UP000007266    UP000075886    UP000075880    UP000075883    UP000075903    UP000030765    UP000192223    UP000076502    UP000053097    UP000279307    UP000053825    UP000000311    UP000078542    UP000008820    UP000075885    UP000007755    UP000078541    UP000007062    UP000215335    UP000242457    UP000030742    UP000078540    UP000009046    UP000075809    UP000005205    UP000005203    UP000053105    UP000019118    UP000078492    UP000002282    UP000008711    UP000007798    UP000092444    UP000092445    UP000192221    UP000078200    UP000268350    UP000091820    UP000092443    UP000092460    UP000007801    UP000001070    UP000000803    UP000001819    UP000076408    UP000235965    UP000015103    UP000095301    UP000095300    UP000092553    UP000008792    UP000008237    UP000009192    UP000245037   

PRIDE

E1JJF2    Q9W3V0   

Pfam

PF00270   DEAD        + More
PF00271   Helicase_C

Interpro

IPR038757   BRAP        + More
IPR027417   P-loop_NTPase       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR001650   Helicase_C       
IPR000629   RNA-helicase_DEAD-box_CS       
IPR014001   Helicase_ATP-bd       

SUPFAM

SSF52540   SSF52540       

CDD

cd00079  HELICc

ProteinModelPortal

A0A2A4J4K0   A0A2H1V440   A0A212FNX6   A0A194R9J4   A0A0L7LC29   A0A1Q3F904   + More
W5JTL5   B0X896   A0A182N9A7   A0A182RJL0   A0A0P6JSP8   A0A1S4FNA9   A0A182WBI3   A0A182JRN7   A0A2M4CNF8   A0A182WWI1   A0A182L3N6   A0A182I6R1   A0A182TZD4   A0A182FEM3   A0A1Y1MH36   A0A139WIX5   A0A182Q8N8   A0A182IQX4   A0A182LTG1   A0A182VAG1   A0A0C9R5D3   A0A0C9RJU9   A0A084W142   A0A1W4XRP4   A0A154PDQ1   A0A026VTY1   A0A1L8DA30   A0A0L7R7A2   E2ACS2   E9J8M0   A0A0K8TKR0   A0A151IES1   Q16V43   A0A182PIJ2   F4W6A4   A0A195FJ32   Q7QIL4   A0A1B6FVE1   A0A232EZW6   A0A2A3E237   U4TUN5   A0A1B6K505   A0A195AW28   E0VCC6   A0A151WHP1   A0A158P220   A0A088A2R4   A0A0M8ZRF4   N6UJH6   A0A195DMM2   A0A1B6MGP5   B4PZ93   B3NXX1   A0A1B6H8I9   B4NEP8   A0A0A9ZFG2   D3TPC9   A0A1B0ABV9   A0A1W4V9R3   A0A1A9UHM6   A0A3B0JWR5   A0A1A9W1W6   A0A1A9XIB8   A0A1B0ARV5   B3MS62   B4JND0   E1JJF2   A0A1B6CT62   A0A1B6CW23   Q29JM5   A0A0K8W4K8   A0A034W9P2   A0A182Y2B6   A0A0A1WLH7   W8AJM0   A0A2J7Q502   T1IB28   A0A1I8NC67   A0A1I8Q8X2   A0A0M3QZA8   B4M7J5   E2BCT9   A0A146LTY3   A0A336ME62   B4L1D2   A0A2M4AY05   A0A2R7VNB8   Q9W3V0   A0A0T6B2F1   A0A2P8XAH9  

KEGG

105841900    no KO assigned | (RefSeq) uncharacterized LOC105841900

GO

GO:0016021   GO:0005524   GO:0003676   GO:0016301  

PANTHER

PTHR35259  

Length:

332

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.97159

Exp number, first 60 AAs:

0.22325

Total prob of N-in:

0.90736

inside

1  -  60

TMhelix

61  -  83

outside

84  -  332

 

 

Pi

197.722963

Theta

176.913023

Tajima's D

0.314335

CLR

0.090306

CSRT

0.460376981150942

Interpretation

Uncertain